RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 IGLV5-37A0A075B6J1 123 aa7.27□□□□□ -1.25
GTF3C1-204ENST00000564664 SERF1AO75920 110 aa7.27□□□□□ -1.25
GTF3C1-204ENST00000564664 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
GTF3C1-204ENST00000564664 CHCHD1Q96BP2 118 aaKnown RBP7.26□□□□□ -1.25
GTF3C1-204ENST00000564664 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
GTF3C1-204ENST00000564664 LINC00587B1AMM8 73 aa7.25□□□□□ -1.25
GTF3C1-204ENST00000564664 ATP5LO75964 103 aa7.25□□□□□ -1.25
GTF3C1-204ENST00000564664 SPINK8P0C7L1 97 aa7.24□□□□□ -1.25
GTF3C1-204ENST00000564664 CRYGAP11844 174 aa7.24□□□□□ -1.25
GTF3C1-204ENST00000564664 NKAPP1Q8N9T2 125 aa7.24□□□□□ -1.25
GTF3C1-204ENST00000564664 LINC00614P0C842 121 aa7.23□□□□□ -1.25
GTF3C1-204ENST00000564664 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
GTF3C1-204ENST00000564664 DDTP30046 118 aa7.23□□□□□ -1.25
GTF3C1-204ENST00000564664 COX17Q14061 63 aa7.23□□□□□ -1.25
GTF3C1-204ENST00000564664 SFTA2Q6UW10 78 aa7.23□□□□□ -1.25
GTF3C1-204ENST00000564664 IGLV5-39A0A0G2JS06 123 aa7.22□□□□□ -1.25
GTF3C1-204ENST00000564664 C20orf202A1L168 122 aa7.22□□□□□ -1.25
GTF3C1-204ENST00000564664 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
GTF3C1-204ENST00000564664 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
GTF3C1-204ENST00000564664 PRR4Q16378 134 aa7.22□□□□□ -1.25
GTF3C1-204ENST00000564664 LPAP08519 4548 aa7.21□□□□□ -1.25
GTF3C1-204ENST00000564664 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.26
GTF3C1-204ENST00000564664 HSBP1O75506 76 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 SCGB1D1O95968 90 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 HBDP02042 147 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 UBE2AP49459 152 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 KRTAP13-1Q8IUC0 172 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 TYMSOSQ8TAI1 123 aa7.2□□□□□ -1.26
GTF3C1-204ENST00000564664 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
GTF3C1-204ENST00000564664 A0A087X002 238 aa7.18□□□□□ -1.26
GTF3C1-204ENST00000564664 A0A096LNJ9 63 aa7.18□□□□□ -1.26
GTF3C1-204ENST00000564664 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
GTF3C1-204ENST00000564664 PFN2P35080 140 aa7.18□□□□□ -1.26
GTF3C1-204ENST00000564664 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
GTF3C1-204ENST00000564664 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
GTF3C1-204ENST00000564664 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
GTF3C1-204ENST00000564664 URB1-AS1Q96HZ7 61 aa7.17□□□□□ -1.26
GTF3C1-204ENST00000564664 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
GTF3C1-204ENST00000564664 TSPAN13O95857 204 aa7.16□□□□□ -1.26
GTF3C1-204ENST00000564664 C3orf79P0CE67 100 aa7.16□□□□□ -1.26
GTF3C1-204ENST00000564664 VPREB1P12018 145 aa7.16□□□□□ -1.26
GTF3C1-204ENST00000564664 MIEN1Q9BRT3 115 aa7.16□□□□□ -1.26
GTF3C1-204ENST00000564664 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
GTF3C1-204ENST00000564664 HSPB8Q9UJY1 196 aa7.16□□□□□ -1.26
GTF3C1-204ENST00000564664 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.26
GTF3C1-204ENST00000564664 IGKV2D-28P01615 120 aa7.15□□□□□ -1.26
GTF3C1-204ENST00000564664 PET117Q6UWS5 81 aa7.15□□□□□ -1.26
GTF3C1-204ENST00000564664 LEPROTL1O95214 131 aa7.14□□□□□ -1.27
GTF3C1-204ENST00000564664 TMEM170BQ5T4T1 132 aa7.14□□□□□ -1.27
GTF3C1-204ENST00000564664 TMEM126AQ9H061 195 aa7.14□□□□□ -1.27
GTF3C1-204ENST00000564664 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 C11orf86A6NJI1 115 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 KRTDAPP60985 99 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 PRO1933Q9H354 126 aa7.13□□□□□ -1.27
GTF3C1-204ENST00000564664 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
GTF3C1-204ENST00000564664 M0R143 59 aa7.12□□□□□ -1.27
GTF3C1-204ENST00000564664 FAM19A2Q8N3H0 131 aa7.12□□□□□ -1.27
GTF3C1-204ENST00000564664 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
GTF3C1-204ENST00000564664 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
GTF3C1-204ENST00000564664 CHTOPQ9Y3Y2 248 aaKnown RBP7.12□□□□□ -1.27
GTF3C1-204ENST00000564664 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
GTF3C1-204ENST00000564664 M0R378 163 aa7.11□□□□□ -1.27
GTF3C1-204ENST00000564664 LINC00158P58513 81 aa7.11□□□□□ -1.27
GTF3C1-204ENST00000564664 LINC00304Q8N9R0 145 aa7.11□□□□□ -1.27
GTF3C1-204ENST00000564664 PLEKHB2Q96CS7 222 aa7.11□□□□□ -1.27
GTF3C1-204ENST00000564664 MAP1LC3CQ9BXW4 147 aa7.11□□□□□ -1.27
GTF3C1-204ENST00000564664 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
GTF3C1-204ENST00000564664 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
GTF3C1-204ENST00000564664 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
GTF3C1-204ENST00000564664 IFI27L1Q96BM0 104 aa7.1□□□□□ -1.27
GTF3C1-204ENST00000564664 PRLHP81277 87 aa7.09□□□□□ -1.27
GTF3C1-204ENST00000564664 SPATA45Q537H7 98 aa7.09□□□□□ -1.27
GTF3C1-204ENST00000564664 MUC2Q02817 5179 aa7.09□□□□□ -1.27
GTF3C1-204ENST00000564664 HERV-K104P63124 156 aa7.08□□□□□ -1.28
GTF3C1-204ENST00000564664 SPAG11AQ6PDA7 123 aa7.08□□□□□ -1.28
GTF3C1-204ENST00000564664 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
GTF3C1-204ENST00000564664 Q8NDZ9 215 aa7.07□□□□□ -1.28
GTF3C1-204ENST00000564664 PMCHL2Q9BQD1 86 aa7.07□□□□□ -1.28
GTF3C1-204ENST00000564664 SNHG12Q9BXW3 62 aa7.07□□□□□ -1.28
GTF3C1-204ENST00000564664 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
GTF3C1-204ENST00000564664 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
GTF3C1-204ENST00000564664 PRYO14603 147 aa7.05□□□□□ -1.28
GTF3C1-204ENST00000564664 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
GTF3C1-204ENST00000564664 HIGD2AQ9BW72 106 aa7.05□□□□□ -1.28
GTF3C1-204ENST00000564664 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
GTF3C1-204ENST00000564664 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 DLEU1O43261 78 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 SMIM13P0DJ93 91 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 MEIG1Q5JSS6 88 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 BOD1L2Q8IYS8 172 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 LINC00337Q8N6G1 96 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
GTF3C1-204ENST00000564664 IGLV7-46A0A075B6I9 117 aa7.03□□□□□ -1.28
GTF3C1-204ENST00000564664 A0A0U1RRA0 63 aa7.03□□□□□ -1.28
GTF3C1-204ENST00000564664 SPRR1AP35321 89 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms