RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 IGHG2P01859 326 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 BAALC-AS2P0C853 105 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 INAFM2P0DMQ5 153 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 WT1-ASQ06250 92 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 PDE6HQ13956 83 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 RBMY1FQ15415 496 aaKnown RBP2.34□□□□□ -2.03
CHD9-212ENST00000564641 Q6JHZ5 121 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 HCP5Q6MZN7 132 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 VMO1Q7Z5L0 202 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 MRPL55Q7Z7F7 128 aaKnown RBP2.34□□□□□ -2.03
CHD9-212ENST00000564641 DAND5Q8N907 189 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 C11orf72Q8NBR9 251 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 SMCR5Q8TEV8 140 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 BRK1Q8WUW1 75 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 CLEC2BQ92478 149 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 SLC50A1Q9BRV3 221 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 TIMM21Q9BVV7 248 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 CNFNQ9BYD5 112 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 TRAV26-2A0A0B4J265 109 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 A0A0J9YX75 114 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 SDHAF1A6NFY7 115 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 E7EUB6 86 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 TRGV3P03979 118 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 CGB3P0DN86 165 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 CGB7P0DN87 165 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 PRB4P10163 310 aaPredicted RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 RPL27AP46776 148 aaKnown RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 ZNF80P51504 273 aaPredicted RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 FAM201AQ5SY85 155 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 MINOS1Q5TGZ0 78 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 DAZ4Q86SG3 579 aaKnown RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 DYNAPQ8N1N2 210 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 CYSTM1Q9H1C7 97 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 DAZ1Q9NQZ3 744 aaKnown RBP2.33□□□□□ -2.04
CHD9-212ENST00000564641 LAMTOR3Q9UHA4 124 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 MINOS1-NBL1R4GNA1 71 aa2.33□□□□□ -2.04
CHD9-212ENST00000564641 IGLV4-69A0A075B6H9 119 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 TRAV12-3A0A0B4J271 114 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 H3BUX3 64 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 M0R381 172 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 COX7A2LO14548 114 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 BCE1O60756 84 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 LHBP01229 141 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 IGKV1-16P04430 117 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 MGPP08493 103 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 XCL1P47992 114 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 TSPEAR-AS2P59090 65 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 C10orf55Q5SWW7 151 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
CHD9-212ENST00000564641 ZNF833PQ6ZTB9 187 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 LY6G5BQ8NDX9 201 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 TIMM17AQ99595 171 aa2.32□□□□□ -2.04
CHD9-212ENST00000564641 IGKV1D-17A0A075B6S4 117 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 DNAL4O96015 105 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 S100A4P26447 101 aaKnown RBP2.31□□□□□ -2.04
CHD9-212ENST00000564641 UBE2AP49459 152 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 ATP5EP56381 51 aaPredicted RBP2.31□□□□□ -2.04
CHD9-212ENST00000564641 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
CHD9-212ENST00000564641 CIRBPQ14011 172 aaKnown RBP2.31□□□□□ -2.04
CHD9-212ENST00000564641 MIAQ16674 131 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 FAM223AQ8IWN6 122 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 Q8TAT8 98 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 AMELXQ99217 191 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 CCL13Q99616 98 aa2.31□□□□□ -2.04
CHD9-212ENST00000564641 SORL1Q92673 2214 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 IGHV3-64A0A075B6Q5 118 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 TRBV7-6A0A0J9YX20 115 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 A0A0J9YXV3 536 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 IGIPA6NJ69 53 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 C3orf84H3BNL1 204 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 I3L2K1 104 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 NDUFC1O43677 76 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 TIMM17BO60830 172 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 APELAP0DMC3 54 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 CD164Q04900 197 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 LY6EQ16553 131 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 FAM222AQ5U5X8 452 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 Q8N2B8 174 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 WFDC9Q8NEX5 89 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 RPL39LQ96EH5 51 aaKnown RBP2.3□□□□□ -2.04
CHD9-212ENST00000564641 UBE2E2Q96LR5 201 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 LINC00574Q9H8X3 128 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 TENM3Q9P273 2699 aa2.3□□□□□ -2.04
CHD9-212ENST00000564641 TRAV23DV6A0A075B6W5 121 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 A0A087WVE0 104 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 IGHV7-4-1A0A0J9YVY3 117 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 A6NDX4 124 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms