RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TRAPPC1Q9Y5R8 145 aa13.83□□□□□ -0.2
NME3-206ENST00000564252 BAGE3Q86Y29 109 aa13.82□□□□□ -0.2
NME3-206ENST00000564252 TMEM170BQ5T4T1 132 aa13.81□□□□□ -0.2
NME3-206ENST00000564252 SFTA2Q6UW10 78 aa13.81□□□□□ -0.2
NME3-206ENST00000564252 PLEKHB2Q96CS7 222 aa13.81□□□□□ -0.2
NME3-206ENST00000564252 CTAG1AP78358 180 aa13.77□□□□□ -0.21
NME3-206ENST00000564252 FAT4Q6V0I7 4981 aa13.77□□□□□ -0.21
NME3-206ENST00000564252 CBLN2Q8IUK8 224 aa13.77□□□□□ -0.21
NME3-206ENST00000564252 C3orf22Q8N5N4 141 aa13.77□□□□□ -0.21
NME3-206ENST00000564252 TPRXLQ17RH7 258 aa13.76□□□□□ -0.21
NME3-206ENST00000564252 CHTOPQ9Y3Y2 248 aaKnown RBP13.75□□□□□ -0.21
NME3-206ENST00000564252 LINC00158P58513 81 aa13.74□□□□□ -0.21
NME3-206ENST00000564252 HIGD2AQ9BW72 106 aa13.74□□□□□ -0.21
NME3-206ENST00000564252 IGLV7-46A0A075B6I9 117 aa13.73□□□□□ -0.21
NME3-206ENST00000564252 TMEM223A0PJW6 202 aa13.72□□□□□ -0.21
NME3-206ENST00000564252 A0A0U1RRA0 63 aa13.71□□□□□ -0.21
NME3-206ENST00000564252 CDIP1Q9H305 208 aa13.71□□□□□ -0.21
NME3-206ENST00000564252 SPRR4Q96PI1 79 aa13.7□□□□□ -0.22
NME3-206ENST00000564252 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
NME3-206ENST00000564252 LCE2AQ5TA79 106 aaPredicted RBP13.69□□□□□ -0.22
NME3-206ENST00000564252 APOC3P02656 99 aa13.66□□□□□ -0.22
NME3-206ENST00000564252 SMIM13P0DJ93 91 aa13.66□□□□□ -0.22
NME3-206ENST00000564252 IFI27L1Q96BM0 104 aa13.66□□□□□ -0.22
NME3-206ENST00000564252 SPAG11AQ6PDA7 123 aa13.65□□□□□ -0.22
NME3-206ENST00000564252 CHCHD1Q96BP2 118 aaKnown RBP13.65□□□□□ -0.22
NME3-206ENST00000564252 PRYO14603 147 aa13.64□□□□□ -0.23
NME3-206ENST00000564252 BOD1L2Q8IYS8 172 aa13.64□□□□□ -0.23
NME3-206ENST00000564252 PPDPFQ9H3Y8 114 aa13.64□□□□□ -0.23
NME3-206ENST00000564252 ZNF706Q9Y5V0 76 aaPredicted RBP13.64□□□□□ -0.23
NME3-206ENST00000564252 NCR3O14931 201 aa13.62□□□□□ -0.23
NME3-206ENST00000564252 SNAPINO95295 136 aa13.62□□□□□ -0.23
NME3-206ENST00000564252 SPRR1AP35321 89 aa13.62□□□□□ -0.23
NME3-206ENST00000564252 MEIG1Q5JSS6 88 aa13.62□□□□□ -0.23
NME3-206ENST00000564252 MIR7-3HGQ8N6C7 128 aa13.62□□□□□ -0.23
NME3-206ENST00000564252 LINC00337Q8N6G1 96 aa13.62□□□□□ -0.23
NME3-206ENST00000564252 ATP6V1G1O75348 118 aa13.61□□□□□ -0.23
NME3-206ENST00000564252 SVBPQ8N300 66 aa13.61□□□□□ -0.23
NME3-206ENST00000564252 YPEL4Q96NS1 127 aa13.61□□□□□ -0.23
NME3-206ENST00000564252 KRTAP9-2Q9BYQ4 174 aa13.61□□□□□ -0.23
NME3-206ENST00000564252 KCNQ1DNQ9H478 68 aa13.61□□□□□ -0.23
NME3-206ENST00000564252 KRTAP4-16G5E9R7 235 aaPredicted RBP13.6□□□□□ -0.23
NME3-206ENST00000564252 HERV-K104P63124 156 aa13.6□□□□□ -0.23
NME3-206ENST00000564252 NDUFA5Q16718 116 aa13.57□□□□□ -0.24
NME3-206ENST00000564252 DAND5Q8N907 189 aa13.57□□□□□ -0.24
NME3-206ENST00000564252 Q8NBF4 154 aa13.57□□□□□ -0.24
NME3-206ENST00000564252 SMCR5Q8TEV8 140 aa13.57□□□□□ -0.24
NME3-206ENST00000564252 NDUFA12Q9UI09 145 aa13.57□□□□□ -0.24
NME3-206ENST00000564252 C4orf48Q5BLP8 95 aa13.56□□□□□ -0.24
NME3-206ENST00000564252 FP248Q71RG6 208 aaPredicted RBP13.56□□□□□ -0.24
NME3-206ENST00000564252 TRBV10-3A0A0K0K1G6 114 aa13.55□□□□□ -0.24
NME3-206ENST00000564252 ETDCA0A1B0GVM5 59 aa13.55□□□□□ -0.24
NME3-206ENST00000564252 FAM19A2Q8N3H0 131 aa13.55□□□□□ -0.24
NME3-206ENST00000564252 LINC00587B1AMM8 73 aa13.54□□□□□ -0.24
NME3-206ENST00000564252 MYMXA0A1B0GTQ4 84 aa13.53□□□□□ -0.24
NME3-206ENST00000564252 LINC00483Q53H64 154 aa13.53□□□□□ -0.24
NME3-206ENST00000564252 HSBP1O75506 76 aa13.52□□□□□ -0.25
NME3-206ENST00000564252 TSPEAR-AS2P59090 65 aa13.51□□□□□ -0.25
NME3-206ENST00000564252 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
NME3-206ENST00000564252 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
NME3-206ENST00000564252 H0Y8G0 127 aa13.49□□□□□ -0.25
NME3-206ENST00000564252 KRTAP13-3Q3SY46 172 aa13.49□□□□□ -0.25
NME3-206ENST00000564252 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
NME3-206ENST00000564252 B5MCH6 92 aa13.48□□□□□ -0.25
NME3-206ENST00000564252 SPINK1P00995 79 aa13.48□□□□□ -0.25
NME3-206ENST00000564252 LEPROTO15243 131 aa13.46□□□□□ -0.25
NME3-206ENST00000564252 ERC2-IT1O76042 136 aa13.46□□□□□ -0.25
NME3-206ENST00000564252 S100A12P80511 92 aa13.46□□□□□ -0.25
NME3-206ENST00000564252 GAGE2AQ6NT46 116 aa13.46□□□□□ -0.25
NME3-206ENST00000564252 TRBV10-2A0A0K0K1G8 114 aa13.45□□□□□ -0.26
NME3-206ENST00000564252 DDTP30046 118 aa13.45□□□□□ -0.26
NME3-206ENST00000564252 LINC00310P59036 64 aa13.44□□□□□ -0.26
NME3-206ENST00000564252 LEPROTL1O95214 131 aa13.43□□□□□ -0.26
NME3-206ENST00000564252 Q9BRP9 147 aa13.43□□□□□ -0.26
NME3-206ENST00000564252 MOBPQ13875 183 aa13.42□□□□□ -0.26
NME3-206ENST00000564252 IGLV9-49A0A0B4J1Y8 123 aa13.41□□□□□ -0.26
NME3-206ENST00000564252 J3QQQ9 107 aa13.41□□□□□ -0.26
NME3-206ENST00000564252 TRGC2P03986 189 aa13.41□□□□□ -0.26
NME3-206ENST00000564252 PLNP26678 52 aa13.41□□□□□ -0.26
NME3-206ENST00000564252 ASB16-AS1Q495Z4 193 aa13.41□□□□□ -0.26
NME3-206ENST00000564252 SERF1AO75920 110 aa13.4□□□□□ -0.26
NME3-206ENST00000564252 Q6ZRX8 168 aa13.4□□□□□ -0.26
NME3-206ENST00000564252 SPANXB1Q9NS25 103 aaPredicted RBP13.4□□□□□ -0.26
NME3-206ENST00000564252 RPS29P62273 56 aaKnown RBP13.39□□□□□ -0.27
NME3-206ENST00000564252 SSBP3-AS1Q7Z2R9 100 aa13.39□□□□□ -0.27
NME3-206ENST00000564252 Q8N377 158 aa13.38□□□□□ -0.27
NME3-206ENST00000564252 IGLV6-57P01721 117 aa13.37□□□□□ -0.27
NME3-206ENST00000564252 NMUP48645 174 aa13.37□□□□□ -0.27
NME3-206ENST00000564252 DPM2O94777 84 aa13.36□□□□□ -0.27
NME3-206ENST00000564252 NDUFC2O95298 119 aa13.36□□□□□ -0.27
NME3-206ENST00000564252 HERVK_113P61574 105 aa13.36□□□□□ -0.27
NME3-206ENST00000564252 PMCHL2Q9BQD1 86 aa13.36□□□□□ -0.27
NME3-206ENST00000564252 MIEN1Q9BRT3 115 aa13.36□□□□□ -0.27
NME3-206ENST00000564252 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
NME3-206ENST00000564252 S100A7L2Q5SY68 101 aa13.34□□□□□ -0.27
NME3-206ENST00000564252 IGKCP01834 107 aa13.33□□□□□ -0.28
NME3-206ENST00000564252 FABP4P15090 132 aa13.33□□□□□ -0.28
NME3-206ENST00000564252 LGALS3P17931 250 aaKnown RBP13.33□□□□□ -0.28
NME3-206ENST00000564252 KRTAP4-1Q9BYQ7 146 aa13.33□□□□□ -0.28
NME3-206ENST00000564252 TRAV23DV6A0A075B6W5 121 aa13.32□□□□□ -0.28
NME3-206ENST00000564252 SOSTDC1Q6X4U4 206 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms