RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 KRTAP9-6A0A140TA67 174 aa11.96□□□□□ -0.49
HERC2-204ENST00000563945 LINC00158P58513 81 aa11.96□□□□□ -0.49
HERC2-204ENST00000563945 FP248Q71RG6 208 aaPredicted RBP11.96□□□□□ -0.49
HERC2-204ENST00000563945 TMEM170BQ5T4T1 132 aa11.95□□□□□ -0.5
HERC2-204ENST00000563945 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
HERC2-204ENST00000563945 TMEM218A2RU14 115 aa11.93□□□□□ -0.5
HERC2-204ENST00000563945 ATP6V1G1O75348 118 aa11.93□□□□□ -0.5
HERC2-204ENST00000563945 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
HERC2-204ENST00000563945 CLLU1Q5K131 121 aa11.92□□□□□ -0.5
HERC2-204ENST00000563945 HBDP02042 147 aa11.91□□□□□ -0.5
HERC2-204ENST00000563945 BAGE3Q86Y29 109 aa11.91□□□□□ -0.5
HERC2-204ENST00000563945 Q8NDZ9 215 aa11.91□□□□□ -0.5
HERC2-204ENST00000563945 A0A0U1RRA0 63 aa11.9□□□□□ -0.5
HERC2-204ENST00000563945 LINC00614P0C842 121 aa11.9□□□□□ -0.5
HERC2-204ENST00000563945 SEC11CQ9BY50 192 aa11.9□□□□□ -0.5
HERC2-204ENST00000563945 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
HERC2-204ENST00000563945 DAND5Q8N907 189 aa11.88□□□□□ -0.51
HERC2-204ENST00000563945 Q8NBF4 154 aa11.88□□□□□ -0.51
HERC2-204ENST00000563945 A0A096LNJ9 63 aa11.86□□□□□ -0.51
HERC2-204ENST00000563945 LINC01547P58512 204 aaPredicted RBP11.86□□□□□ -0.51
HERC2-204ENST00000563945 ETDCA0A1B0GVM5 59 aa11.85□□□□□ -0.51
HERC2-204ENST00000563945 PRYO14603 147 aa11.85□□□□□ -0.51
HERC2-204ENST00000563945 SPINK1P00995 79 aa11.85□□□□□ -0.51
HERC2-204ENST00000563945 PMCHL1Q16048 86 aa11.85□□□□□ -0.51
HERC2-204ENST00000563945 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
HERC2-204ENST00000563945 S100A12P80511 92 aa11.84□□□□□ -0.51
HERC2-204ENST00000563945 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
HERC2-204ENST00000563945 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
HERC2-204ENST00000563945 CHTOPQ9Y3Y2 248 aaKnown RBP11.84□□□□□ -0.51
HERC2-204ENST00000563945 TRAPPC1Q9Y5R8 145 aa11.84□□□□□ -0.51
HERC2-204ENST00000563945 KRTAP13-3Q3SY46 172 aa11.83□□□□□ -0.52
HERC2-204ENST00000563945 MEIG1Q5JSS6 88 aa11.83□□□□□ -0.52
HERC2-204ENST00000563945 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
HERC2-204ENST00000563945 RPS10P5Q9NQ39 176 aa11.83□□□□□ -0.52
HERC2-204ENST00000563945 SEC61BP60468 96 aaKnown RBP11.82□□□□□ -0.52
HERC2-204ENST00000563945 ASB16-AS1Q495Z4 193 aa11.82□□□□□ -0.52
HERC2-204ENST00000563945 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
HERC2-204ENST00000563945 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
HERC2-204ENST00000563945 NCR3O14931 201 aa11.8□□□□□ -0.52
HERC2-204ENST00000563945 RHEBQ15382 184 aa11.79□□□□□ -0.52
HERC2-204ENST00000563945 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
HERC2-204ENST00000563945 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
HERC2-204ENST00000563945 LINC00587B1AMM8 73 aa11.78□□□□□ -0.52
HERC2-204ENST00000563945 GAGE2AQ6NT46 116 aa11.78□□□□□ -0.52
HERC2-204ENST00000563945 SPRR1AP35321 89 aa11.77□□□□□ -0.53
HERC2-204ENST00000563945 HERV-K104P63124 156 aa11.77□□□□□ -0.53
HERC2-204ENST00000563945 FAM19A2Q8N3H0 131 aa11.77□□□□□ -0.53
HERC2-204ENST00000563945 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.53
HERC2-204ENST00000563945 MAP1LC3CQ9BXW4 147 aa11.76□□□□□ -0.53
HERC2-204ENST00000563945 IGLV9-49A0A0B4J1Y8 123 aa11.75□□□□□ -0.53
HERC2-204ENST00000563945 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
HERC2-204ENST00000563945 MOBPQ13875 183 aa11.74□□□□□ -0.53
HERC2-204ENST00000563945 SSBP3-AS1Q7Z2R9 100 aa11.74□□□□□ -0.53
HERC2-204ENST00000563945 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
HERC2-204ENST00000563945 LINC00483Q53H64 154 aa11.73□□□□□ -0.53
HERC2-204ENST00000563945 COMMD7Q86VX2 200 aa11.72□□□□□ -0.53
HERC2-204ENST00000563945 IFI27L1Q96BM0 104 aa11.72□□□□□ -0.53
HERC2-204ENST00000563945 MYMXA0A1B0GTQ4 84 aa11.71□□□□□ -0.53
HERC2-204ENST00000563945 KRTAP4-16G5E9R7 235 aaPredicted RBP11.71□□□□□ -0.53
HERC2-204ENST00000563945 SLC25A20O43772 301 aa11.71□□□□□ -0.53
HERC2-204ENST00000563945 RPS29P62273 56 aaKnown RBP11.7□□□□□ -0.54
HERC2-204ENST00000563945 B5MCH6 92 aa11.68□□□□□ -0.54
HERC2-204ENST00000563945 C10orf91Q5T1B1 145 aa11.68□□□□□ -0.54
HERC2-204ENST00000563945 Q8N377 158 aa11.68□□□□□ -0.54
HERC2-204ENST00000563945 DDTP30046 118 aa11.67□□□□□ -0.54
HERC2-204ENST00000563945 CHCHD1Q96BP2 118 aaKnown RBP11.67□□□□□ -0.54
HERC2-204ENST00000563945 KRTAP4-1Q9BYQ7 146 aa11.66□□□□□ -0.54
HERC2-204ENST00000563945 ERC2-IT1O76042 136 aa11.65□□□□□ -0.54
HERC2-204ENST00000563945 IFITM2Q01629 132 aa11.65□□□□□ -0.54
HERC2-204ENST00000563945 MIEN1Q9BRT3 115 aa11.64□□□□□ -0.55
HERC2-204ENST00000563945 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
HERC2-204ENST00000563945 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
HERC2-204ENST00000563945 C9orf153Q5TBE3 101 aa11.63□□□□□ -0.55
HERC2-204ENST00000563945 JOSD1Q15040 202 aaPredicted RBP11.62□□□□□ -0.55
HERC2-204ENST00000563945 S100A7L2Q5SY68 101 aa11.62□□□□□ -0.55
HERC2-204ENST00000563945 H0Y8G0 127 aa11.61□□□□□ -0.55
HERC2-204ENST00000563945 Q6ZRX8 168 aa11.61□□□□□ -0.55
HERC2-204ENST00000563945 XP32Q5T750 250 aa11.6□□□□□ -0.55
HERC2-204ENST00000563945 Q9BRP9 147 aa11.6□□□□□ -0.55
HERC2-204ENST00000563945 HSBP1O75506 76 aa11.59□□□□□ -0.55
HERC2-204ENST00000563945 APOC3P02656 99 aa11.59□□□□□ -0.55
HERC2-204ENST00000563945 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
HERC2-204ENST00000563945 LOC107984156A0A0G2JMH3 177 aa11.58□□□□□ -0.56
HERC2-204ENST00000563945 LEPROTO15243 131 aa11.58□□□□□ -0.56
HERC2-204ENST00000563945 ARL17AQ8IVW1 177 aa11.58□□□□□ -0.56
HERC2-204ENST00000563945 NDUFA5Q16718 116 aa11.57□□□□□ -0.56
HERC2-204ENST00000563945 SNAPINO95295 136 aa11.56□□□□□ -0.56
HERC2-204ENST00000563945 HINT1P49773 126 aaPredicted RBP11.55□□□□□ -0.56
HERC2-204ENST00000563945 HERVK_113P61574 105 aa11.55□□□□□ -0.56
HERC2-204ENST00000563945 TRAV23DV6A0A075B6W5 121 aa11.54□□□□□ -0.56
HERC2-204ENST00000563945 J3QQQ9 107 aa11.53□□□□□ -0.56
HERC2-204ENST00000563945 NDUFC2O95298 119 aa11.53□□□□□ -0.56
HERC2-204ENST00000563945 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
HERC2-204ENST00000563945 TSPEAR-AS2P59090 65 aa11.53□□□□□ -0.56
HERC2-204ENST00000563945 SVBPQ8N300 66 aa11.53□□□□□ -0.56
HERC2-204ENST00000563945 IGLV6-57P01721 117 aa11.52□□□□□ -0.57
HERC2-204ENST00000563945 PLNP26678 52 aa11.52□□□□□ -0.57
HERC2-204ENST00000563945 NMUP48645 174 aa11.52□□□□□ -0.57
HERC2-204ENST00000563945 CRCT1Q9UGL9 99 aa11.52□□□□□ -0.57
HERC2-204ENST00000563945 CBY1Q9Y3M2 126 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms