RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 H0Y8G0 127 aa5.47□□□□□ -1.53
PTPN9-203ENST00000563835 HSBP1O75506 76 aa5.47□□□□□ -1.53
PTPN9-203ENST00000563835 RPL28P46779 137 aaKnown RBP5.47□□□□□ -1.53
PTPN9-203ENST00000563835 ANAPC11Q9NYG5 84 aa5.47□□□□□ -1.53
PTPN9-203ENST00000563835 SERF1AO75920 110 aa5.46□□□□□ -1.54
PTPN9-203ENST00000563835 UBE2AP49459 152 aa5.46□□□□□ -1.54
PTPN9-203ENST00000563835 PRLHP81277 87 aa5.46□□□□□ -1.54
PTPN9-203ENST00000563835 RPL13AP40429 203 aaKnown RBP5.45□□□□□ -1.54
PTPN9-203ENST00000563835 LINC00158P58513 81 aa5.45□□□□□ -1.54
PTPN9-203ENST00000563835 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
PTPN9-203ENST00000563835 COX17Q14061 63 aa5.45□□□□□ -1.54
PTPN9-203ENST00000563835 TMEM126AQ9H061 195 aa5.45□□□□□ -1.54
PTPN9-203ENST00000563835 TMA7Q9Y2S6 64 aaKnown RBP5.45□□□□□ -1.54
PTPN9-203ENST00000563835 M0R378 163 aa5.44□□□□□ -1.54
PTPN9-203ENST00000563835 SMIM13P0DJ93 91 aa5.44□□□□□ -1.54
PTPN9-203ENST00000563835 SFTA2Q6UW10 78 aa5.44□□□□□ -1.54
PTPN9-203ENST00000563835 FAM19A1Q7Z5A9 133 aa5.44□□□□□ -1.54
PTPN9-203ENST00000563835 NCR3O14931 201 aa5.43□□□□□ -1.54
PTPN9-203ENST00000563835 RPL24P83731 157 aaKnown RBP5.43□□□□□ -1.54
PTPN9-203ENST00000563835 KRTAP13-2Q52LG2 175 aa5.43□□□□□ -1.54
PTPN9-203ENST00000563835 PMCHL2Q9BQD1 86 aa5.43□□□□□ -1.54
PTPN9-203ENST00000563835 LEPROTL1O95214 131 aa5.42□□□□□ -1.54
PTPN9-203ENST00000563835 TSPAN13O95857 204 aa5.42□□□□□ -1.54
PTPN9-203ENST00000563835 FABP4P15090 132 aa5.42□□□□□ -1.54
PTPN9-203ENST00000563835 MEIG1Q5JSS6 88 aa5.42□□□□□ -1.54
PTPN9-203ENST00000563835 MIR7-3HGQ8N6C7 128 aa5.42□□□□□ -1.54
PTPN9-203ENST00000563835 CRYGAP11844 174 aa5.41□□□□□ -1.54
PTPN9-203ENST00000563835 PRR4Q16378 134 aa5.41□□□□□ -1.54
PTPN9-203ENST00000563835 DAND5Q8N907 189 aa5.41□□□□□ -1.54
PTPN9-203ENST00000563835 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
PTPN9-203ENST00000563835 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
PTPN9-203ENST00000563835 BOD1L2Q8IYS8 172 aa5.4□□□□□ -1.54
PTPN9-203ENST00000563835 LEPROTO15243 131 aa5.39□□□□□ -1.55
PTPN9-203ENST00000563835 PLNP26678 52 aa5.39□□□□□ -1.55
PTPN9-203ENST00000563835 HERV-K104P63124 156 aa5.39□□□□□ -1.55
PTPN9-203ENST00000563835 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
PTPN9-203ENST00000563835 MYMXA0A1B0GTQ4 84 aa5.38□□□□□ -1.55
PTPN9-203ENST00000563835 J3QQQ9 107 aa5.38□□□□□ -1.55
PTPN9-203ENST00000563835 DPM2O94777 84 aa5.38□□□□□ -1.55
PTPN9-203ENST00000563835 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
PTPN9-203ENST00000563835 HSPB8Q9UJY1 196 aa5.38□□□□□ -1.55
PTPN9-203ENST00000563835 PRYO14603 147 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BKO60814 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 IGKCP01834 107 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BJP06899 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BOP23527 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BBP33778 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BDP58876 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BCP62807 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST2H2BEQ16778 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-203ENST00000563835 C3orf22Q8N5N4 141 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BHQ93079 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BNQ99877 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 HIST1H2BMQ99879 126 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 RETNLBQ9BQ08 111 aa5.37□□□□□ -1.55
PTPN9-203ENST00000563835 TRBV10-3A0A0K0K1G6 114 aa5.36□□□□□ -1.55
PTPN9-203ENST00000563835 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
PTPN9-203ENST00000563835 IGKV2D-26A0A0A0MRZ7 120 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
PTPN9-203ENST00000563835 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
PTPN9-203ENST00000563835 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
PTPN9-203ENST00000563835 SPRR1AP35321 89 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 HERVK_113P61574 105 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 NPC2P61916 151 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 MAP1LC3CQ9BXW4 147 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 KCNQ1DNQ9H478 68 aa5.35□□□□□ -1.55
PTPN9-203ENST00000563835 SOSTDC1Q6X4U4 206 aa5.34□□□□□ -1.55
PTPN9-203ENST00000563835 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.55
PTPN9-203ENST00000563835 SMCR5Q8TEV8 140 aa5.34□□□□□ -1.55
PTPN9-203ENST00000563835 ETDCA0A1B0GVM5 59 aa5.33□□□□□ -1.56
PTPN9-203ENST00000563835 LINC00587B1AMM8 73 aa5.33□□□□□ -1.56
PTPN9-203ENST00000563835 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
PTPN9-203ENST00000563835 NMUP48645 174 aa5.33□□□□□ -1.56
PTPN9-203ENST00000563835 PPDPFQ9H3Y8 114 aa5.33□□□□□ -1.56
PTPN9-203ENST00000563835 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 E9PLD3 99 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 DDTP30046 118 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 SNRPEP62304 92 aaKnown RBP5.32□□□□□ -1.56
PTPN9-203ENST00000563835 ADAMTSL4-AS1Q5T5F5 129 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
PTPN9-203ENST00000563835 SPANXB1Q9NS25 103 aaPredicted RBP5.32□□□□□ -1.56
PTPN9-203ENST00000563835 MUC2Q02817 5179 aa5.31□□□□□ -1.56
PTPN9-203ENST00000563835 B5MCH6 92 aa5.31□□□□□ -1.56
PTPN9-203ENST00000563835 Q9BRP9 147 aa5.31□□□□□ -1.56
PTPN9-203ENST00000563835 MIEN1Q9BRT3 115 aa5.31□□□□□ -1.56
PTPN9-203ENST00000563835 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
PTPN9-203ENST00000563835 TRBV10-2A0A0K0K1G8 114 aa5.3□□□□□ -1.56
PTPN9-203ENST00000563835 C5orf52A6NGY3 159 aa5.3□□□□□ -1.56
PTPN9-203ENST00000563835 LINC01545Q5VT33 79 aa5.3□□□□□ -1.56
PTPN9-203ENST00000563835 LITAFQ99732 161 aa5.3□□□□□ -1.56
PTPN9-203ENST00000563835 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
PTPN9-203ENST00000563835 LOC105371267A0A1B0GV96 52 aa5.29□□□□□ -1.56
PTPN9-203ENST00000563835 NDUFC2O95298 119 aa5.29□□□□□ -1.56
PTPN9-203ENST00000563835 IGLV6-57P01721 117 aa5.29□□□□□ -1.56
PTPN9-203ENST00000563835 C3orf79P0CE67 100 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms