RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 RPL28P46779 137 aaKnown RBP9.17□□□□□ -0.94
SMPD3-205ENST00000563455 ATXN8Q156A1 80 aa9.17□□□□□ -0.94
SMPD3-205ENST00000563455 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
SMPD3-205ENST00000563455 H0YGX0 51 aa9.16□□□□□ -0.94
SMPD3-205ENST00000563455 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
SMPD3-205ENST00000563455 C6orf223Q8N319 242 aa9.16□□□□□ -0.94
SMPD3-205ENST00000563455 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
SMPD3-205ENST00000563455 NBDYA0A0U1RRE5 68 aa9.15□□□□□ -0.94
SMPD3-205ENST00000563455 PSCAO43653 123 aa9.15□□□□□ -0.94
SMPD3-205ENST00000563455 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.94
SMPD3-205ENST00000563455 NAA38Q9BRA0 125 aaKnown RBP9.15□□□□□ -0.94
SMPD3-205ENST00000563455 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 H7C2G1 150 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 M0QXV9 152 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 SNCGO76070 127 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
SMPD3-205ENST00000563455 Q6ZRU5 148 aa9.13□□□□□ -0.95
SMPD3-205ENST00000563455 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
SMPD3-205ENST00000563455 TRIAP1O43715 76 aa9.12□□□□□ -0.95
SMPD3-205ENST00000563455 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
SMPD3-205ENST00000563455 H3BMG7 143 aa9.11□□□□□ -0.95
SMPD3-205ENST00000563455 C9orf116Q5BN46 136 aaPredicted RBP9.11□□□□□ -0.95
SMPD3-205ENST00000563455 LINC00337Q8N6G1 96 aa9.11□□□□□ -0.95
SMPD3-205ENST00000563455 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
SMPD3-205ENST00000563455 A0A1B0GX51 115 aa9.1□□□□□ -0.95
SMPD3-205ENST00000563455 TCL1BO95988 128 aa9.1□□□□□ -0.95
SMPD3-205ENST00000563455 CNBPP62633 177 aaKnown RBP9.1□□□□□ -0.95
SMPD3-205ENST00000563455 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
SMPD3-205ENST00000563455 KMT2AQ03164 3969 aa9.1□□□□□ -0.95
SMPD3-205ENST00000563455 S100A7L2Q5SY68 101 aa9.09□□□□□ -0.95
SMPD3-205ENST00000563455 LINC00526Q96FQ7 95 aa9.09□□□□□ -0.95
SMPD3-205ENST00000563455 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
SMPD3-205ENST00000563455 LST1O00453 97 aa9.08□□□□□ -0.96
SMPD3-205ENST00000563455 TRACP01848 142 aa9.08□□□□□ -0.96
SMPD3-205ENST00000563455 KRTAP17-1Q9BYP8 105 aa9.08□□□□□ -0.96
SMPD3-205ENST00000563455 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
SMPD3-205ENST00000563455 M0R378 163 aa9.07□□□□□ -0.96
SMPD3-205ENST00000563455 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
SMPD3-205ENST00000563455 SMIM11BQ8TCY0 68 aa9.06□□□□□ -0.96
SMPD3-205ENST00000563455 TRBV7-6A0A0J9YX20 115 aa9.05□□□□□ -0.96
SMPD3-205ENST00000563455 H3BT86 120 aa9.05□□□□□ -0.96
SMPD3-205ENST00000563455 J3QR89 54 aa9.05□□□□□ -0.96
SMPD3-205ENST00000563455 GHRHP01286 108 aa9.05□□□□□ -0.96
SMPD3-205ENST00000563455 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
SMPD3-205ENST00000563455 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
SMPD3-205ENST00000563455 DNAH10Q8IVF4 4471 aa9.04□□□□□ -0.96
SMPD3-205ENST00000563455 H3BQ85 93 aa9.04□□□□□ -0.96
SMPD3-205ENST00000563455 K7ERU9 68 aa9.04□□□□□ -0.96
SMPD3-205ENST00000563455 FRAS1Q86XX4 4008 aa9.03□□□□□ -0.96
SMPD3-205ENST00000563455 M0R2N4 97 aa9.03□□□□□ -0.96
SMPD3-205ENST00000563455 Q6ZRP5 223 aa9.03□□□□□ -0.96
SMPD3-205ENST00000563455 PRO0461Q9UI25 63 aa9.03□□□□□ -0.96
SMPD3-205ENST00000563455 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 SLC25A20O43772 301 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 VPREB1P12018 145 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 XAGE1AQ9HD64 81 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 VPS13DQ5THJ4 4388 aa9.02□□□□□ -0.97
SMPD3-205ENST00000563455 C9JAW5 83 aa9.01□□□□□ -0.97
SMPD3-205ENST00000563455 DNAL4O96015 105 aa9.01□□□□□ -0.97
SMPD3-205ENST00000563455 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
SMPD3-205ENST00000563455 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
SMPD3-205ENST00000563455 Q6ZR54 194 aa9.01□□□□□ -0.97
SMPD3-205ENST00000563455 ANKRD29Q8N6D5 301 aa9.01□□□□□ -0.97
SMPD3-205ENST00000563455 TEN1Q86WV5 123 aa9□□□□□ -0.97
SMPD3-205ENST00000563455 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
SMPD3-205ENST00000563455 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
SMPD3-205ENST00000563455 RTL8CO15255 209 aa8.99□□□□□ -0.97
SMPD3-205ENST00000563455 SLPIP03973 132 aa8.99□□□□□ -0.97
SMPD3-205ENST00000563455 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 NCR3O14931 201 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 WFDC2Q14508 124 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
SMPD3-205ENST00000563455 CLEC2BQ92478 149 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 DNAH6Q9C0G6 4158 aa8.98□□□□□ -0.97
SMPD3-205ENST00000563455 HERC2O95714 4834 aa8.97□□□□□ -0.97
SMPD3-205ENST00000563455 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
SMPD3-205ENST00000563455 OCIAD2Q56VL3 154 aa8.97□□□□□ -0.97
SMPD3-205ENST00000563455 C9orf129Q5T035 196 aaKnown RBP8.97□□□□□ -0.97
SMPD3-205ENST00000563455 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
SMPD3-205ENST00000563455 DIRC1Q969H9 104 aa8.97□□□□□ -0.97
SMPD3-205ENST00000563455 TRBV10-3A0A0K0K1G6 114 aa8.96□□□□□ -0.98
SMPD3-205ENST00000563455 LECT2O14960 151 aa8.96□□□□□ -0.98
SMPD3-205ENST00000563455 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
SMPD3-205ENST00000563455 GAGE2BQ13066 116 aa8.95□□□□□ -0.98
SMPD3-205ENST00000563455 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
SMPD3-205ENST00000563455 C6orf99Q4VX62 202 aa8.95□□□□□ -0.98
SMPD3-205ENST00000563455 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
SMPD3-205ENST00000563455 KCNQ1DNQ9H478 68 aa8.95□□□□□ -0.98
SMPD3-205ENST00000563455 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
SMPD3-205ENST00000563455 Q8N814 137 aa8.94□□□□□ -0.98
SMPD3-205ENST00000563455 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
SMPD3-205ENST00000563455 Q8NDZ9 215 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms