RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 LCE2AQ5TA79 106 aaPredicted RBP12.08□□□□□ -0.48
CHD9-208ENST00000563410 CTAG1AP78358 180 aa12.07□□□□□ -0.48
CHD9-208ENST00000563410 RHEBQ15382 184 aa12.07□□□□□ -0.48
CHD9-208ENST00000563410 TPRXLQ17RH7 258 aa12.07□□□□□ -0.48
CHD9-208ENST00000563410 COMMD7Q86VX2 200 aa12.07□□□□□ -0.48
CHD9-208ENST00000563410 C3orf22Q8N5N4 141 aa12.07□□□□□ -0.48
CHD9-208ENST00000563410 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
CHD9-208ENST00000563410 BAGE3Q86Y29 109 aa12.06□□□□□ -0.48
CHD9-208ENST00000563410 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
CHD9-208ENST00000563410 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
CHD9-208ENST00000563410 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
CHD9-208ENST00000563410 IGLV7-46A0A075B6I9 117 aa12.04□□□□□ -0.48
CHD9-208ENST00000563410 CDIP1Q9H305 208 aa12.03□□□□□ -0.48
CHD9-208ENST00000563410 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
CHD9-208ENST00000563410 KRTAP9-2Q9BYQ4 174 aa12.02□□□□□ -0.49
CHD9-208ENST00000563410 LINC00158P58513 81 aa12.01□□□□□ -0.49
CHD9-208ENST00000563410 SPRR4Q96PI1 79 aa12□□□□□ -0.49
CHD9-208ENST00000563410 CHTOPQ9Y3Y2 248 aaKnown RBP12□□□□□ -0.49
CHD9-208ENST00000563410 A0A0U1RRA0 63 aa11.99□□□□□ -0.49
CHD9-208ENST00000563410 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
CHD9-208ENST00000563410 PPDPFQ9H3Y8 114 aa11.97□□□□□ -0.49
CHD9-208ENST00000563410 SMIM13P0DJ93 91 aa11.95□□□□□ -0.5
CHD9-208ENST00000563410 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
CHD9-208ENST00000563410 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
CHD9-208ENST00000563410 PRYO14603 147 aa11.93□□□□□ -0.5
CHD9-208ENST00000563410 SPRR1AP35321 89 aa11.92□□□□□ -0.5
CHD9-208ENST00000563410 BOD1L2Q8IYS8 172 aa11.92□□□□□ -0.5
CHD9-208ENST00000563410 LINC00337Q8N6G1 96 aa11.91□□□□□ -0.5
CHD9-208ENST00000563410 IFI27L1Q96BM0 104 aa11.91□□□□□ -0.5
CHD9-208ENST00000563410 KCNQ1DNQ9H478 68 aa11.91□□□□□ -0.5
CHD9-208ENST00000563410 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
CHD9-208ENST00000563410 KRTAP4-16G5E9R7 235 aaPredicted RBP11.9□□□□□ -0.5
CHD9-208ENST00000563410 NCR3O14931 201 aa11.9□□□□□ -0.5
CHD9-208ENST00000563410 MIR7-3HGQ8N6C7 128 aa11.9□□□□□ -0.5
CHD9-208ENST00000563410 APOC3P02656 99 aa11.89□□□□□ -0.51
CHD9-208ENST00000563410 MEIG1Q5JSS6 88 aa11.89□□□□□ -0.51
CHD9-208ENST00000563410 DAND5Q8N907 189 aa11.89□□□□□ -0.51
CHD9-208ENST00000563410 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
CHD9-208ENST00000563410 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
CHD9-208ENST00000563410 ATP6V1G1O75348 118 aa11.88□□□□□ -0.51
CHD9-208ENST00000563410 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
CHD9-208ENST00000563410 Q8NBF4 154 aa11.88□□□□□ -0.51
CHD9-208ENST00000563410 HERV-K104P63124 156 aa11.87□□□□□ -0.51
CHD9-208ENST00000563410 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
CHD9-208ENST00000563410 YPEL4Q96NS1 127 aa11.87□□□□□ -0.51
CHD9-208ENST00000563410 TRBV10-3A0A0K0K1G6 114 aa11.86□□□□□ -0.51
CHD9-208ENST00000563410 SNAPINO95295 136 aa11.85□□□□□ -0.51
CHD9-208ENST00000563410 KRTAP13-3Q3SY46 172 aa11.85□□□□□ -0.51
CHD9-208ENST00000563410 ETDCA0A1B0GVM5 59 aa11.84□□□□□ -0.51
CHD9-208ENST00000563410 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
CHD9-208ENST00000563410 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
CHD9-208ENST00000563410 SVBPQ8N300 66 aa11.83□□□□□ -0.52
CHD9-208ENST00000563410 FAM19A2Q8N3H0 131 aa11.82□□□□□ -0.52
CHD9-208ENST00000563410 LINC00587B1AMM8 73 aa11.81□□□□□ -0.52
CHD9-208ENST00000563410 SPINK1P00995 79 aa11.81□□□□□ -0.52
CHD9-208ENST00000563410 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
CHD9-208ENST00000563410 B5MCH6 92 aa11.8□□□□□ -0.52
CHD9-208ENST00000563410 TSPEAR-AS2P59090 65 aa11.8□□□□□ -0.52
CHD9-208ENST00000563410 LOC107984156A0A0G2JMH3 177 aa11.79□□□□□ -0.52
CHD9-208ENST00000563410 ERC2-IT1O76042 136 aa11.79□□□□□ -0.52
CHD9-208ENST00000563410 NDUFA5Q16718 116 aa11.79□□□□□ -0.52
CHD9-208ENST00000563410 ARL17AQ8IVW1 177 aa11.79□□□□□ -0.52
CHD9-208ENST00000563410 MAP1LC3CQ9BXW4 147 aa11.79□□□□□ -0.52
CHD9-208ENST00000563410 GAGE2AQ6NT46 116 aa11.78□□□□□ -0.52
CHD9-208ENST00000563410 HSBP1O75506 76 aa11.77□□□□□ -0.53
CHD9-208ENST00000563410 ASB16-AS1Q495Z4 193 aa11.77□□□□□ -0.53
CHD9-208ENST00000563410 H0Y8G0 127 aa11.76□□□□□ -0.53
CHD9-208ENST00000563410 Q9BRP9 147 aa11.76□□□□□ -0.53
CHD9-208ENST00000563410 LEPROTO15243 131 aa11.75□□□□□ -0.53
CHD9-208ENST00000563410 DDTP30046 118 aa11.75□□□□□ -0.53
CHD9-208ENST00000563410 MOBPQ13875 183 aa11.75□□□□□ -0.53
CHD9-208ENST00000563410 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
CHD9-208ENST00000563410 TRBV10-2A0A0K0K1G8 114 aa11.74□□□□□ -0.53
CHD9-208ENST00000563410 S100A12P80511 92 aa11.74□□□□□ -0.53
CHD9-208ENST00000563410 KRTAP4-1Q9BYQ7 146 aa11.74□□□□□ -0.53
CHD9-208ENST00000563410 LINC00310P59036 64 aa11.73□□□□□ -0.53
CHD9-208ENST00000563410 SSBP3-AS1Q7Z2R9 100 aa11.73□□□□□ -0.53
CHD9-208ENST00000563410 Q8N377 158 aa11.73□□□□□ -0.53
CHD9-208ENST00000563410 RPS29P62273 56 aaKnown RBP11.72□□□□□ -0.53
CHD9-208ENST00000563410 Q6ZRX8 168 aa11.72□□□□□ -0.53
CHD9-208ENST00000563410 LEPROTL1O95214 131 aa11.71□□□□□ -0.53
CHD9-208ENST00000563410 J3QQQ9 107 aa11.7□□□□□ -0.54
CHD9-208ENST00000563410 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
CHD9-208ENST00000563410 KRTAP9-6A0A140TA67 174 aa11.69□□□□□ -0.54
CHD9-208ENST00000563410 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
CHD9-208ENST00000563410 SERF1AO75920 110 aa11.68□□□□□ -0.54
CHD9-208ENST00000563410 TRGC2P03986 189 aa11.68□□□□□ -0.54
CHD9-208ENST00000563410 PLNP26678 52 aa11.68□□□□□ -0.54
CHD9-208ENST00000563410 NDUFC2O95298 119 aa11.67□□□□□ -0.54
CHD9-208ENST00000563410 NMUP48645 174 aa11.66□□□□□ -0.54
CHD9-208ENST00000563410 SEC61BP60468 96 aaKnown RBP11.66□□□□□ -0.54
CHD9-208ENST00000563410 PMCHL2Q9BQD1 86 aa11.66□□□□□ -0.54
CHD9-208ENST00000563410 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.54
CHD9-208ENST00000563410 DPM2O94777 84 aa11.65□□□□□ -0.54
CHD9-208ENST00000563410 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
CHD9-208ENST00000563410 SLC25A20O43772 301 aa11.64□□□□□ -0.55
CHD9-208ENST00000563410 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
CHD9-208ENST00000563410 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
CHD9-208ENST00000563410 TRAV23DV6A0A075B6W5 121 aa11.63□□□□□ -0.55
CHD9-208ENST00000563410 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms