RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 DPM2O94777 84 aa9.93□□□□□ -0.82
HDGFL3-203ENST00000563404 PRSS2P07478 247 aa9.93□□□□□ -0.82
HDGFL3-203ENST00000563404 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-203ENST00000563404 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
HDGFL3-203ENST00000563404 Q8IZM0 81 aa9.93□□□□□ -0.82
HDGFL3-203ENST00000563404 A0A087X002 238 aa9.92□□□□□ -0.82
HDGFL3-203ENST00000563404 TSPAN13O95857 204 aa9.92□□□□□ -0.82
HDGFL3-203ENST00000563404 CKS1BP61024 79 aa9.92□□□□□ -0.82
HDGFL3-203ENST00000563404 C20orf202A1L168 122 aa9.91□□□□□ -0.82
HDGFL3-203ENST00000563404 H0Y8G0 127 aa9.91□□□□□ -0.82
HDGFL3-203ENST00000563404 IGKCP01834 107 aa9.91□□□□□ -0.82
HDGFL3-203ENST00000563404 KRTDAPP60985 99 aa9.91□□□□□ -0.82
HDGFL3-203ENST00000563404 IGLV5-39A0A0G2JS06 123 aa9.9□□□□□ -0.82
HDGFL3-203ENST00000563404 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
HDGFL3-203ENST00000563404 LBHQ53QV2 105 aaPredicted RBP9.9□□□□□ -0.82
HDGFL3-203ENST00000563404 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
HDGFL3-203ENST00000563404 MUC17Q685J3 4493 aa9.89□□□□□ -0.83
HDGFL3-203ENST00000563404 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
HDGFL3-203ENST00000563404 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
HDGFL3-203ENST00000563404 MRPL55Q7Z7F7 128 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-203ENST00000563404 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
HDGFL3-203ENST00000563404 BCE1O60756 84 aa9.87□□□□□ -0.83
HDGFL3-203ENST00000563404 TMA7Q9Y2S6 64 aaKnown RBP9.87□□□□□ -0.83
HDGFL3-203ENST00000563404 CXCL5P42830 114 aa9.86□□□□□ -0.83
HDGFL3-203ENST00000563404 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
HDGFL3-203ENST00000563404 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
HDGFL3-203ENST00000563404 ANAPC11Q9NYG5 84 aa9.86□□□□□ -0.83
HDGFL3-203ENST00000563404 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
HDGFL3-203ENST00000563404 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-203ENST00000563404 HERVK_113P61574 105 aa9.85□□□□□ -0.83
HDGFL3-203ENST00000563404 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
HDGFL3-203ENST00000563404 PMCHL2Q9BQD1 86 aa9.85□□□□□ -0.83
HDGFL3-203ENST00000563404 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
HDGFL3-203ENST00000563404 TYMSOSQ8TAI1 123 aa9.84□□□□□ -0.83
HDGFL3-203ENST00000563404 CRYGAP11844 174 aa9.83□□□□□ -0.84
HDGFL3-203ENST00000563404 KRTAP13-2Q52LG2 175 aa9.83□□□□□ -0.84
HDGFL3-203ENST00000563404 GAGE10A6NGK3 116 aa9.82□□□□□ -0.84
HDGFL3-203ENST00000563404 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
HDGFL3-203ENST00000563404 PLEKHB2Q96CS7 222 aa9.82□□□□□ -0.84
HDGFL3-203ENST00000563404 KRTAP9-2Q9BYQ4 174 aa9.82□□□□□ -0.84
HDGFL3-203ENST00000563404 E9PLD3 99 aa9.81□□□□□ -0.84
HDGFL3-203ENST00000563404 LEPROTO15243 131 aa9.81□□□□□ -0.84
HDGFL3-203ENST00000563404 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
HDGFL3-203ENST00000563404 LCE2AQ5TA79 106 aaPredicted RBP9.8□□□□□ -0.84
HDGFL3-203ENST00000563404 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
HDGFL3-203ENST00000563404 JOSD1Q15040 202 aaPredicted RBP9.79□□□□□ -0.84
HDGFL3-203ENST00000563404 SCGB1D1O95968 90 aa9.78□□□□□ -0.84
HDGFL3-203ENST00000563404 NMUP48645 174 aa9.78□□□□□ -0.84
HDGFL3-203ENST00000563404 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
HDGFL3-203ENST00000563404 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
HDGFL3-203ENST00000563404 J3QQQ9 107 aa9.77□□□□□ -0.85
HDGFL3-203ENST00000563404 HERV-K104P63124 156 aa9.77□□□□□ -0.85
HDGFL3-203ENST00000563404 LINC00587B1AMM8 73 aa9.76□□□□□ -0.85
HDGFL3-203ENST00000563404 MYMXA0A1B0GTQ4 84 aa9.75□□□□□ -0.85
HDGFL3-203ENST00000563404 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
HDGFL3-203ENST00000563404 UBE2AP49459 152 aa9.75□□□□□ -0.85
HDGFL3-203ENST00000563404 COX17Q14061 63 aa9.75□□□□□ -0.85
HDGFL3-203ENST00000563404 NDUFA12Q9UI09 145 aa9.75□□□□□ -0.85
HDGFL3-203ENST00000563404 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-203ENST00000563404 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
HDGFL3-203ENST00000563404 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
HDGFL3-203ENST00000563404 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
HDGFL3-203ENST00000563404 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
HDGFL3-203ENST00000563404 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
HDGFL3-203ENST00000563404 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
HDGFL3-203ENST00000563404 TSPEAR-AS2P59090 65 aa9.72□□□□□ -0.85
HDGFL3-203ENST00000563404 ANKRD39Q53RE8 183 aa9.71□□□□□ -0.86
HDGFL3-203ENST00000563404 IGKV2D-26A0A0A0MRZ7 120 aa9.7□□□□□ -0.86
HDGFL3-203ENST00000563404 PRLHP81277 87 aa9.7□□□□□ -0.86
HDGFL3-203ENST00000563404 PYY3Q5JQD4 70 aa9.7□□□□□ -0.86
HDGFL3-203ENST00000563404 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
HDGFL3-203ENST00000563404 VPREB1P12018 145 aa9.69□□□□□ -0.86
HDGFL3-203ENST00000563404 TMEM238C9JI98 176 aa9.68□□□□□ -0.86
HDGFL3-203ENST00000563404 PFN2P35080 140 aa9.68□□□□□ -0.86
HDGFL3-203ENST00000563404 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
HDGFL3-203ENST00000563404 Q8NDZ9 215 aa9.68□□□□□ -0.86
HDGFL3-203ENST00000563404 FAM19A1Q7Z5A9 133 aa9.67□□□□□ -0.86
HDGFL3-203ENST00000563404 TMEM126AQ9H061 195 aa9.67□□□□□ -0.86
HDGFL3-203ENST00000563404 TIMM17BO60830 172 aa9.66□□□□□ -0.86
HDGFL3-203ENST00000563404 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
HDGFL3-203ENST00000563404 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
HDGFL3-203ENST00000563404 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
HDGFL3-203ENST00000563404 IGLV7-46A0A075B6I9 117 aa9.65□□□□□ -0.86
HDGFL3-203ENST00000563404 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
HDGFL3-203ENST00000563404 M0R378 163 aa9.65□□□□□ -0.86
HDGFL3-203ENST00000563404 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
HDGFL3-203ENST00000563404 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
HDGFL3-203ENST00000563404 DLEU1O43261 78 aa9.64□□□□□ -0.87
HDGFL3-203ENST00000563404 LINC00158P58513 81 aa9.64□□□□□ -0.87
HDGFL3-203ENST00000563404 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
HDGFL3-203ENST00000563404 LOC105371267A0A1B0GV96 52 aa9.63□□□□□ -0.87
HDGFL3-203ENST00000563404 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
HDGFL3-203ENST00000563404 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
HDGFL3-203ENST00000563404 KRTAP9-6A0A140TA67 174 aa9.62□□□□□ -0.87
HDGFL3-203ENST00000563404 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
HDGFL3-203ENST00000563404 COX8AP10176 69 aa9.62□□□□□ -0.87
HDGFL3-203ENST00000563404 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
HDGFL3-203ENST00000563404 CTAG1AP78358 180 aa9.61□□□□□ -0.87
HDGFL3-203ENST00000563404 SPATA45Q537H7 98 aa9.61□□□□□ -0.87
HDGFL3-203ENST00000563404 Q6ZVH6 145 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms