RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SVEP1Q4LDE5 3571 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 A0A1B0GU33 70 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 A6NN06 94 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 A8MTW9 85 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 M0R2P5 195 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 MGST1P10620 155 aaKnown RBP3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 TDRG1Q3Y452 100 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 SVBPQ8N300 66 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 Q8N814 137 aa3.18□□□□□ -1.9
VPS35P1-201ENST00000563400 FBN1P35555 2871 aaKnown RBP3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 TRGV4A0A0C4DH28 118 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 ZNF705FA8MVS1 300 aaPredicted RBP3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 H3BNG1 76 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 M0R3E3 92 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 CCL18P55774 89 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 ESRGQ1W209 222 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 SPANXN1Q5VSR9 72 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 LINC01545Q5VT33 79 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 SMIM7Q9BQ49 75 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 PRO1933Q9H354 126 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 SERP1Q9Y6X1 66 aa3.17□□□□□ -1.9
VPS35P1-201ENST00000563400 MUC21A0A0G2JKD1 596 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 G3V3Q6 166 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 CKS2P33552 79 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 FXYD2P54710 66 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 ROMO1P60602 79 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 LINC00526Q96FQ7 95 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
VPS35P1-201ENST00000563400 IGKV2-40A0A087WW87 121 aaPredicted RBP3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 A0A087WWC5 75 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 DEFB131BA0A096LNP1 70 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 IGKV2D-40P01614 121 aaPredicted RBP3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 PRB2P02812 416 aaPredicted RBP3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 ELOBQ15370 118 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 C1orf134Q5TEV5 83 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 COPS9Q8WXC6 57 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 TVP23CQ96ET8 276 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 PRO0255Q9UI72 69 aa3.15□□□□□ -1.9
VPS35P1-201ENST00000563400 TRGV1A0A0A0MS02 117 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 LINC01549A6NIU2 74 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 DEFB130BP0DP73 79 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 DEFB130AP0DP74 79 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 PYY3Q5JQD4 70 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 GDF5OSQ5U4N7 250 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 FP248Q71RG6 208 aaPredicted RBP3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 Q86TA4 180 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 UBE2DNLQ8IWF7 75 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 NOP10Q9NPE3 64 aaKnown RBP3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 RPS10P5Q9NQ39 176 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 HHLA3Q9XRX5 114 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 MGAM2Q2M2H8 2515 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 LOC107984156A0A0G2JMH3 177 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 TRBV10-1A0A0K0K1A3 114 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 TRBV6-4A0A1B0GX49 114 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 RHOHQ15669 191 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 ARL17AQ8IVW1 177 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 TMEM242Q9NWH2 141 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 KIF25-AS1Q9Y6Z4 181 aa3.14□□□□□ -1.91
VPS35P1-201ENST00000563400 A0A1B0GUT8 65 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 SPINK4O60575 86 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 CRPP02741 224 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 ADIRFQ15847 76 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 FAM19A2Q8N3H0 131 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 Q8TAT8 98 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 TSKUQ8WUA8 353 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 RAB37Q96AX2 223 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 MUC4Q99102 2169 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 SPANXDQ9BXN6 97 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 WFDC10AQ9H1F0 79 aa3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 NHP2Q9NX24 153 aaKnown RBP3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 ANK3Q12955 4377 aaKnown RBP3.13□□□□□ -1.91
VPS35P1-201ENST00000563400 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
VPS35P1-201ENST00000563400 ARMS2P0C7Q2 107 aa3.12□□□□□ -1.91
VPS35P1-201ENST00000563400 HTN3P15516 51 aa3.12□□□□□ -1.91
VPS35P1-201ENST00000563400 TMEM136Q6ZRR5 245 aa3.12□□□□□ -1.91
VPS35P1-201ENST00000563400 DPH3P1Q9H4G8 78 aa3.12□□□□□ -1.91
VPS35P1-201ENST00000563400 DNHD1Q96M86 4753 aa3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 COLCA2A8K830 154 aa3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 K7EMI3 77 aa3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 SFTA3P0C7M3 94 aa3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 ZNF56Q15929 161 aa3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 C20orf166-AS1Q96NR2 134 aa3.11□□□□□ -1.91
VPS35P1-201ENST00000563400 CUBNO60494 3623 aa3.1□□□□□ -1.91
VPS35P1-201ENST00000563400 TRBV7-3A0A075B6L6 115 aa3.1□□□□□ -1.91
VPS35P1-201ENST00000563400 FAM74A4Q5TZK3 123 aa3.1□□□□□ -1.91
VPS35P1-201ENST00000563400 ATP11AUNQ6ZP68 121 aa3.1□□□□□ -1.91
VPS35P1-201ENST00000563400 TMSB15BA0A087X1C1 80 aa3.09□□□□□ -1.91
VPS35P1-201ENST00000563400 HIGD1CA8MV81 97 aa3.09□□□□□ -1.91
VPS35P1-201ENST00000563400 TMEM262E9PQX1 116 aa3.09□□□□□ -1.91
VPS35P1-201ENST00000563400 H3BVH4 76 aa3.09□□□□□ -1.91
VPS35P1-201ENST00000563400 MT-ATP8P03928 68 aa3.09□□□□□ -1.91
VPS35P1-201ENST00000563400 NPC2P61916 151 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms