RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PMCHL2Q9BQD1 86 aa17.09■□□□□ 0.33
NME3-203ENST00000563367 VPREB1P12018 145 aa17.08■□□□□ 0.32
NME3-203ENST00000563367 LINC00158P58513 81 aa17.08■□□□□ 0.32
NME3-203ENST00000563367 Q8NDZ9 215 aa17.08■□□□□ 0.32
NME3-203ENST00000563367 ZNF861PO60384 105 aa17.07■□□□□ 0.32
NME3-203ENST00000563367 A0A0U1RRA0 63 aa17.06■□□□□ 0.32
NME3-203ENST00000563367 PLNP26678 52 aa17.06■□□□□ 0.32
NME3-203ENST00000563367 BCE1O60756 84 aa17.05■□□□□ 0.32
NME3-203ENST00000563367 DPM2O94777 84 aa17.04■□□□□ 0.32
NME3-203ENST00000563367 TSPEAR-AS2P59090 65 aa17.04■□□□□ 0.32
NME3-203ENST00000563367 KRTAP1-4P0C5Y4 121 aa17.03■□□□□ 0.32
NME3-203ENST00000563367 SMIM13P0DJ93 91 aa17.03■□□□□ 0.32
NME3-203ENST00000563367 MAP1LC3CQ9BXW4 147 aa17.03■□□□□ 0.32
NME3-203ENST00000563367 NDUFA12Q9UI09 145 aa17.03■□□□□ 0.32
NME3-203ENST00000563367 RPL24P83731 157 aaKnown RBP17.02■□□□□ 0.32
NME3-203ENST00000563367 PRR26Q8N8Z3 221 aa17.02■□□□□ 0.32
NME3-203ENST00000563367 IGKV2-28A0A075B6P5 120 aa17.01■□□□□ 0.31
NME3-203ENST00000563367 LEPROTO15243 131 aa17.01■□□□□ 0.31
NME3-203ENST00000563367 IGKV2D-28P01615 120 aa17.01■□□□□ 0.31
NME3-203ENST00000563367 IGKCP01834 107 aa17.01■□□□□ 0.31
NME3-203ENST00000563367 HERV-K104P63124 156 aa17■□□□□ 0.31
NME3-203ENST00000563367 MEIG1Q5JSS6 88 aa17■□□□□ 0.31
NME3-203ENST00000563367 IGLV1-50A0A075B6I6 118 aa16.98■□□□□ 0.31
NME3-203ENST00000563367 MYMXA0A1B0GTQ4 84 aa16.98■□□□□ 0.31
NME3-203ENST00000563367 PLEKHB2Q96CS7 222 aa16.98■□□□□ 0.31
NME3-203ENST00000563367 RPL28P46779 137 aaKnown RBP16.97■□□□□ 0.31
NME3-203ENST00000563367 MIR7-3HGQ8N6C7 128 aa16.96■□□□□ 0.31
NME3-203ENST00000563367 J3QQQ9 107 aa16.95■□□□□ 0.3
NME3-203ENST00000563367 ATP6V1G1O75348 118 aa16.95■□□□□ 0.3
NME3-203ENST00000563367 SYS1-DBNDD2H3BUS1 97 aa16.94■□□□□ 0.3
NME3-203ENST00000563367 HERVK_113P61574 105 aa16.94■□□□□ 0.3
NME3-203ENST00000563367 KRTAP13-1Q8IUC0 172 aa16.94■□□□□ 0.3
NME3-203ENST00000563367 TMEM238C9JI98 176 aa16.92■□□□□ 0.3
NME3-203ENST00000563367 LINC00587B1AMM8 73 aa16.91■□□□□ 0.3
NME3-203ENST00000563367 COA6Q5JTJ3 125 aaKnown RBP16.9■□□□□ 0.3
NME3-203ENST00000563367 TMEM126AQ9H061 195 aa16.9■□□□□ 0.3
NME3-203ENST00000563367 UBE2AP49459 152 aa16.89■□□□□ 0.29
NME3-203ENST00000563367 BOD1L2Q8IYS8 172 aa16.89■□□□□ 0.29
NME3-203ENST00000563367 M0R378 163 aa16.88■□□□□ 0.29
NME3-203ENST00000563367 LGALS3P17931 250 aaKnown RBP16.88■□□□□ 0.29
NME3-203ENST00000563367 LINC01545Q5VT33 79 aa16.87■□□□□ 0.29
NME3-203ENST00000563367 DAND5Q8N907 189 aa16.87■□□□□ 0.29
NME3-203ENST00000563367 NMUP48645 174 aa16.86■□□□□ 0.29
NME3-203ENST00000563367 E9PLD3 99 aa16.85■□□□□ 0.29
NME3-203ENST00000563367 PRLHP81277 87 aa16.84■□□□□ 0.29
NME3-203ENST00000563367 PET117Q6UWS5 81 aa16.84■□□□□ 0.29
NME3-203ENST00000563367 FAM19A1Q7Z5A9 133 aa16.84■□□□□ 0.29
NME3-203ENST00000563367 NCR3O14931 201 aa16.83■□□□□ 0.28
NME3-203ENST00000563367 C3orf79P0CE67 100 aa16.83■□□□□ 0.28
NME3-203ENST00000563367 LOC107984156A0A0G2JMH3 177 aa16.8■□□□□ 0.28
NME3-203ENST00000563367 RPL13AP40429 203 aaKnown RBP16.8■□□□□ 0.28
NME3-203ENST00000563367 ARL17AQ8IVW1 177 aa16.8■□□□□ 0.28
NME3-203ENST00000563367 A0A087X002 238 aa16.78■□□□□ 0.28
NME3-203ENST00000563367 IGKV2D-26A0A0A0MRZ7 120 aa16.77■□□□□ 0.28
NME3-203ENST00000563367 A0A0J9YXY3 114 aa16.77■□□□□ 0.28
NME3-203ENST00000563367 KRTDAPP60985 99 aa16.77■□□□□ 0.28
NME3-203ENST00000563367 ANAPC11Q9NYG5 84 aa16.77■□□□□ 0.28
NME3-203ENST00000563367 S100A1P23297 94 aa16.76■□□□□ 0.27
NME3-203ENST00000563367 ADAMTSL4-AS1Q5T5F5 129 aa16.74■□□□□ 0.27
NME3-203ENST00000563367 TRBV10-3A0A0K0K1G6 114 aa16.72■□□□□ 0.27
NME3-203ENST00000563367 PRYO14603 147 aa16.72■□□□□ 0.27
NME3-203ENST00000563367 CRYGAP11844 174 aa16.72■□□□□ 0.27
NME3-203ENST00000563367 KCNQ1DNQ9H478 68 aa16.72■□□□□ 0.27
NME3-203ENST00000563367 EIF4EBP3O60516 100 aaPredicted RBP16.71■□□□□ 0.27
NME3-203ENST00000563367 SOSTDC1Q6X4U4 206 aa16.71■□□□□ 0.27
NME3-203ENST00000563367 UBR4Q5T4S7 5183 aa16.7■□□□□ 0.26
NME3-203ENST00000563367 SPRR1AP35321 89 aa16.7■□□□□ 0.26
NME3-203ENST00000563367 MIEN1Q9BRT3 115 aa16.69■□□□□ 0.26
NME3-203ENST00000563367 NPC2P61916 151 aa16.68■□□□□ 0.26
NME3-203ENST00000563367 LRP2P98164 4655 aa16.68■□□□□ 0.26
NME3-203ENST00000563367 HIGD2AQ9BW72 106 aa16.68■□□□□ 0.26
NME3-203ENST00000563367 TTTY13Q9BZ97 58 aa16.68■□□□□ 0.26
NME3-203ENST00000563367 TRBV10-2A0A0K0K1G8 114 aa16.67■□□□□ 0.26
NME3-203ENST00000563367 KRTAP13-2Q52LG2 175 aa16.67■□□□□ 0.26
NME3-203ENST00000563367 KRTAP4-16G5E9R7 235 aaPredicted RBP16.66■□□□□ 0.26
NME3-203ENST00000563367 LINC00337Q8N6G1 96 aa16.66■□□□□ 0.26
NME3-203ENST00000563367 LITAFQ99732 161 aa16.66■□□□□ 0.26
NME3-203ENST00000563367 NDUFC2O95298 119 aa16.65■□□□□ 0.26
NME3-203ENST00000563367 FAM229BQ4G0N7 80 aa16.65■□□□□ 0.26
NME3-203ENST00000563367 TYMSOSQ8TAI1 123 aa16.65■□□□□ 0.26
NME3-203ENST00000563367 SPANXB1Q9NS25 103 aaPredicted RBP16.65■□□□□ 0.26
NME3-203ENST00000563367 ZNF815PA8K554 130 aa16.64■□□□□ 0.25
NME3-203ENST00000563367 DDTP30046 118 aa16.64■□□□□ 0.25
NME3-203ENST00000563367 C20orf202A1L168 122 aa16.62■□□□□ 0.25
NME3-203ENST00000563367 ATOH7Q8N100 152 aa16.61■□□□□ 0.25
NME3-203ENST00000563367 ETDCA0A1B0GVM5 59 aa16.6■□□□□ 0.25
NME3-203ENST00000563367 TIMM17BO60830 172 aa16.6■□□□□ 0.25
NME3-203ENST00000563367 ANKRD39Q53RE8 183 aa16.59■□□□□ 0.25
NME3-203ENST00000563367 HIST3H2BBQ8N257 126 aa16.59■□□□□ 0.25
NME3-203ENST00000563367 IGLV6-57P01721 117 aa16.58■□□□□ 0.24
NME3-203ENST00000563367 LINC00308Q8TCZ7 52 aa16.58■□□□□ 0.24
NME3-203ENST00000563367 S100A12P80511 92 aa16.57■□□□□ 0.24
NME3-203ENST00000563367 SPRR4Q96PI1 79 aa16.57■□□□□ 0.24
NME3-203ENST00000563367 B5MCH6 92 aa16.56■□□□□ 0.24
NME3-203ENST00000563367 TSPAN13O95857 204 aa16.56■□□□□ 0.24
NME3-203ENST00000563367 S100A7L2Q5SY68 101 aa16.56■□□□□ 0.24
NME3-203ENST00000563367 SMCR5Q8TEV8 140 aa16.56■□□□□ 0.24
NME3-203ENST00000563367 HIST1H2BLQ99880 126 aa16.55■□□□□ 0.24
NME3-203ENST00000563367 LPAP08519 4548 aa16.51■□□□□ 0.23
NME3-203ENST00000563367 S100A2P29034 98 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms