RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 LOC105371267A0A1B0GV96 52 aa11.25□□□□□ -0.61
MAP1LC3B-203ENST00000562778 SERF1AO75920 110 aa11.25□□□□□ -0.61
MAP1LC3B-203ENST00000562778 LINC00310P59036 64 aa11.25□□□□□ -0.61
MAP1LC3B-203ENST00000562778 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
MAP1LC3B-203ENST00000562778 NKAPP1Q8N9T2 125 aa11.25□□□□□ -0.61
MAP1LC3B-203ENST00000562778 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
MAP1LC3B-203ENST00000562778 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
MAP1LC3B-203ENST00000562778 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
MAP1LC3B-203ENST00000562778 S100A2P29034 98 aa11.23□□□□□ -0.61
MAP1LC3B-203ENST00000562778 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
MAP1LC3B-203ENST00000562778 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
MAP1LC3B-203ENST00000562778 Q8NDZ9 215 aa11.22□□□□□ -0.61
MAP1LC3B-203ENST00000562778 VPREB1P12018 145 aa11.21□□□□□ -0.61
MAP1LC3B-203ENST00000562778 FAM19A2Q8N3H0 131 aa11.21□□□□□ -0.61
MAP1LC3B-203ENST00000562778 IFI27L1Q96BM0 104 aa11.21□□□□□ -0.61
MAP1LC3B-203ENST00000562778 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
MAP1LC3B-203ENST00000562778 TMEM223A0PJW6 202 aa11.19□□□□□ -0.62
MAP1LC3B-203ENST00000562778 HSBP1O75506 76 aa11.19□□□□□ -0.62
MAP1LC3B-203ENST00000562778 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
MAP1LC3B-203ENST00000562778 HIST1H2BLQ99880 126 aa11.19□□□□□ -0.62
MAP1LC3B-203ENST00000562778 A0A087X002 238 aa11.18□□□□□ -0.62
MAP1LC3B-203ENST00000562778 A0A0U1RRA0 63 aa11.18□□□□□ -0.62
MAP1LC3B-203ENST00000562778 COX17Q14061 63 aa11.18□□□□□ -0.62
MAP1LC3B-203ENST00000562778 KRTAP13-1Q8IUC0 172 aa11.18□□□□□ -0.62
MAP1LC3B-203ENST00000562778 ANAPC11Q9NYG5 84 aa11.18□□□□□ -0.62
MAP1LC3B-203ENST00000562778 FABP4P15090 132 aa11.17□□□□□ -0.62
MAP1LC3B-203ENST00000562778 UBE2AP49459 152 aa11.17□□□□□ -0.62
MAP1LC3B-203ENST00000562778 TMEM238C9JI98 176 aa11.16□□□□□ -0.62
MAP1LC3B-203ENST00000562778 LINC00158P58513 81 aa11.16□□□□□ -0.62
MAP1LC3B-203ENST00000562778 H0Y8G0 127 aa11.15□□□□□ -0.62
MAP1LC3B-203ENST00000562778 AKR1D1P51857 326 aa11.15□□□□□ -0.62
MAP1LC3B-203ENST00000562778 PRLHP81277 87 aa11.15□□□□□ -0.62
MAP1LC3B-203ENST00000562778 RPL24P83731 157 aaKnown RBP11.14□□□□□ -0.63
MAP1LC3B-203ENST00000562778 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
MAP1LC3B-203ENST00000562778 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
MAP1LC3B-203ENST00000562778 SMIM13P0DJ93 91 aa11.12□□□□□ -0.63
MAP1LC3B-203ENST00000562778 M0R378 163 aa11.11□□□□□ -0.63
MAP1LC3B-203ENST00000562778 TSPAN13O95857 204 aa11.11□□□□□ -0.63
MAP1LC3B-203ENST00000562778 CRYGAP11844 174 aa11.11□□□□□ -0.63
MAP1LC3B-203ENST00000562778 FAM19A1Q7Z5A9 133 aa11.11□□□□□ -0.63
MAP1LC3B-203ENST00000562778 LEPROTL1O95214 131 aa11.09□□□□□ -0.63
MAP1LC3B-203ENST00000562778 KRTAP13-2Q52LG2 175 aa11.09□□□□□ -0.63
MAP1LC3B-203ENST00000562778 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
MAP1LC3B-203ENST00000562778 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
MAP1LC3B-203ENST00000562778 PRR4Q16378 134 aa11.08□□□□□ -0.64
MAP1LC3B-203ENST00000562778 TSPEAR-AS2P59090 65 aa11.07□□□□□ -0.64
MAP1LC3B-203ENST00000562778 MIR7-3HGQ8N6C7 128 aa11.07□□□□□ -0.64
MAP1LC3B-203ENST00000562778 HSPB8Q9UJY1 196 aa11.07□□□□□ -0.64
MAP1LC3B-203ENST00000562778 NDUFA12Q9UI09 145 aa11.06□□□□□ -0.64
MAP1LC3B-203ENST00000562778 BOD1L2Q8IYS8 172 aa11.05□□□□□ -0.64
MAP1LC3B-203ENST00000562778 PMCHL2Q9BQD1 86 aa11.05□□□□□ -0.64
MAP1LC3B-203ENST00000562778 KRTDAPP60985 99 aa11.04□□□□□ -0.64
MAP1LC3B-203ENST00000562778 NCR3O14931 201 aa11.03□□□□□ -0.64
MAP1LC3B-203ENST00000562778 SMIM6P0DI80 62 aa11.03□□□□□ -0.64
MAP1LC3B-203ENST00000562778 HERV-K104P63124 156 aa11.03□□□□□ -0.64
MAP1LC3B-203ENST00000562778 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
MAP1LC3B-203ENST00000562778 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
MAP1LC3B-203ENST00000562778 FAM229BQ4G0N7 80 aa11.02□□□□□ -0.65
MAP1LC3B-203ENST00000562778 PLEKHB2Q96CS7 222 aa11.02□□□□□ -0.65
MAP1LC3B-203ENST00000562778 HIGD2AQ9BW72 106 aa11.02□□□□□ -0.65
MAP1LC3B-203ENST00000562778 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
MAP1LC3B-203ENST00000562778 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
MAP1LC3B-203ENST00000562778 DAND5Q8N907 189 aa11.01□□□□□ -0.65
MAP1LC3B-203ENST00000562778 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
MAP1LC3B-203ENST00000562778 LEPROTO15243 131 aa11□□□□□ -0.65
MAP1LC3B-203ENST00000562778 DPM2O94777 84 aa10.99□□□□□ -0.65
MAP1LC3B-203ENST00000562778 PLNP26678 52 aa10.99□□□□□ -0.65
MAP1LC3B-203ENST00000562778 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
MAP1LC3B-203ENST00000562778 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
MAP1LC3B-203ENST00000562778 J3QQQ9 107 aa10.97□□□□□ -0.65
MAP1LC3B-203ENST00000562778 SCGB1D1O95968 90 aa10.97□□□□□ -0.65
MAP1LC3B-203ENST00000562778 IGKCP01834 107 aa10.97□□□□□ -0.65
MAP1LC3B-203ENST00000562778 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
MAP1LC3B-203ENST00000562778 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
MAP1LC3B-203ENST00000562778 LINC00304Q8N9R0 145 aa10.97□□□□□ -0.65
MAP1LC3B-203ENST00000562778 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
MAP1LC3B-203ENST00000562778 C20orf202A1L168 122 aa10.96□□□□□ -0.65
MAP1LC3B-203ENST00000562778 LINC00587B1AMM8 73 aa10.96□□□□□ -0.65
MAP1LC3B-203ENST00000562778 PRYO14603 147 aa10.96□□□□□ -0.65
MAP1LC3B-203ENST00000562778 LINC00518Q8N0U6 118 aa10.96□□□□□ -0.65
MAP1LC3B-203ENST00000562778 C12orf57Q99622 126 aa10.95□□□□□ -0.66
MAP1LC3B-203ENST00000562778 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
MAP1LC3B-203ENST00000562778 HERVK_113P61574 105 aa10.94□□□□□ -0.66
MAP1LC3B-203ENST00000562778 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
MAP1LC3B-203ENST00000562778 KCNQ1DNQ9H478 68 aa10.94□□□□□ -0.66
MAP1LC3B-203ENST00000562778 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
MAP1LC3B-203ENST00000562778 SPRR1AP35321 89 aa10.93□□□□□ -0.66
MAP1LC3B-203ENST00000562778 MUC2Q02817 5179 aa10.92□□□□□ -0.66
MAP1LC3B-203ENST00000562778 KRTAP4-16G5E9R7 235 aaPredicted RBP10.92□□□□□ -0.66
MAP1LC3B-203ENST00000562778 LINC01545Q5VT33 79 aa10.92□□□□□ -0.66
MAP1LC3B-203ENST00000562778 LINC00337Q8N6G1 96 aa10.92□□□□□ -0.66
MAP1LC3B-203ENST00000562778 LOC107984156A0A0G2JMH3 177 aa10.91□□□□□ -0.66
MAP1LC3B-203ENST00000562778 ARL17AQ8IVW1 177 aa10.91□□□□□ -0.66
MAP1LC3B-203ENST00000562778 ETDCA0A1B0GVM5 59 aa10.9□□□□□ -0.66
MAP1LC3B-203ENST00000562778 NMUP48645 174 aa10.9□□□□□ -0.66
MAP1LC3B-203ENST00000562778 SMCR5Q8TEV8 140 aa10.9□□□□□ -0.66
MAP1LC3B-203ENST00000562778 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
MAP1LC3B-203ENST00000562778 NPC2P61916 151 aa10.89□□□□□ -0.67
MAP1LC3B-203ENST00000562778 DDTP30046 118 aa10.88□□□□□ -0.67
MAP1LC3B-203ENST00000562778 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms