RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 IGHV1-58A0A0C4DH39 117 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 A0A0J9YXV3 536 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 LINC01549A6NIU2 74 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 PANO1I0J062 215 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 IGLC3P0DOY3 106 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 G0S2P27469 103 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 RAB5BP61020 215 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 PMVKQ15126 192 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 TEX43Q6ZNM6 134 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 C5orf38Q86SI9 138 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 LINC01561Q8N1V8 128 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 FAM19A2Q8N3H0 131 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 LINC00526Q96FQ7 95 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 SCGB3A1Q96QR1 104 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 VCX2Q9H322 139 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 TRAV12-1A0A0B4J245 112 aa2.84□□□□□ -1.95
SMG1-206ENST00000562668 TINCRA0A1B0GVN0 87 aa2.84□□□□□ -1.95
SMG1-206ENST00000562668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.84□□□□□ -1.95
SMG1-206ENST00000562668 COX7A2LO14548 114 aa2.84□□□□□ -1.95
SMG1-206ENST00000562668 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
SMG1-206ENST00000562668 SDIM1Q6ZPB5 146 aa2.84□□□□□ -1.95
SMG1-206ENST00000562668 BAGE3Q86Y29 109 aa2.84□□□□□ -1.95
SMG1-206ENST00000562668 CDKN2A-AS1Q9UH64 79 aa2.84□□□□□ -1.95
SMG1-206ENST00000562668 C11orf86A6NJI1 115 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 HSBP1O75506 76 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 ATP5LO75964 103 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 ZNF22P17026 224 aaPredicted RBP2.83□□□□□ -1.96
SMG1-206ENST00000562668 HERVK_113P63121 156 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 Q6ZN92 141 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 Q6ZRU5 148 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 IFI27L1Q96BM0 104 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 C2orf88Q9BSF0 95 aa2.83□□□□□ -1.96
SMG1-206ENST00000562668 LEPROTL1O95214 131 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 KRTAP10-4P60372 401 aaPredicted RBP2.82□□□□□ -1.96
SMG1-206ENST00000562668 HAMPP81172 84 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 SPAG11BQ08648 103 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 UNQ6190/PRO20217Q6UXQ8 127 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 ORAOV1Q8WV07 137 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 PACRGQ96M98 296 aaPredicted RBP2.82□□□□□ -1.96
SMG1-206ENST00000562668 CHAC1Q9BUX1 264 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 MRPL35Q9NZE8 188 aaKnown RBP2.82□□□□□ -1.96
SMG1-206ENST00000562668 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
SMG1-206ENST00000562668 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
SMG1-206ENST00000562668 A0A096LNI7 61 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 F8VRH5 84 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 F8WDY8 70 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 APOMO95445 188 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 TLX1NBP0CAT3 122 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 NDUFA6P56556 154 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 SEC11AP67812 179 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 SCXQ7RTU7 201 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 Q8IZM0 81 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 CIRBP-AS1Q8TBR5 109 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 SPACA4Q8TDM5 124 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 CARD19Q96LW7 228 aa2.81□□□□□ -1.96
SMG1-206ENST00000562668 CHTOPQ9Y3Y2 248 aaKnown RBP2.81□□□□□ -1.96
SMG1-206ENST00000562668 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.8□□□□□ -1.96
SMG1-206ENST00000562668 TMEM223A0PJW6 202 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 SYS1-DBNDD2H3BUS1 97 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 SPINK8P0C7L1 97 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 FABP4P15090 132 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 HIST3H2BBQ8N257 126 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 LINC00469Q8N7U9 141 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 CAMK2N2Q96S95 79 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 GEMIN7Q9H840 131 aaKnown RBP2.8□□□□□ -1.96
SMG1-206ENST00000562668 PLAC8Q9NZF1 115 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 DHRS4-AS1Q9P1J3 65 aa2.8□□□□□ -1.96
SMG1-206ENST00000562668 TRBV30A0A0K0K1B3 111 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 NDUFA1O15239 70 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 C3orf79P0CE67 100 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 TSPEAR-AS2P59090 65 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 C9orf116Q5BN46 136 aaPredicted RBP2.79□□□□□ -1.96
SMG1-206ENST00000562668 LINC01545Q5VT33 79 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 COX7B2Q8TF08 81 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 ZNF625Q96I27 306 aaPredicted RBP2.79□□□□□ -1.96
SMG1-206ENST00000562668 HIST1H2BLQ99880 126 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 PMCHL2Q9BQD1 86 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 HSPB8Q9UJY1 196 aa2.79□□□□□ -1.96
SMG1-206ENST00000562668 TNXBP22105 4242 aa2.78□□□□□ -1.96
SMG1-206ENST00000562668 LOC107984640A0A0U1RRK4 108 aa2.78□□□□□ -1.96
SMG1-206ENST00000562668 H3BRM9 83 aa2.78□□□□□ -1.96
SMG1-206ENST00000562668 SMR3BP02814 79 aaPredicted RBP2.78□□□□□ -1.96
SMG1-206ENST00000562668 C9orf129Q5T035 196 aaKnown RBP2.78□□□□□ -1.96
SMG1-206ENST00000562668 TMEM170BQ5T4T1 132 aa2.78□□□□□ -1.96
SMG1-206ENST00000562668 MAP1LC3CQ9BXW4 147 aa2.78□□□□□ -1.96
SMG1-206ENST00000562668 TOMM7Q9P0U1 55 aa2.78□□□□□ -1.96
SMG1-206ENST00000562668 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 NDUFC2-KCTD14E9PQ53 114 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 H0Y8G0 127 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 DPM2O94777 84 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 IGKCP01834 107 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 PLNP26678 52 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 CXCL5P42830 114 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms