RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 LINC00482Q8N8I6 264 aa9.51□□□□□ -0.89
VPS9D1-202ENST00000561976 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
VPS9D1-202ENST00000561976 C4orf26Q17RF5 130 aa9.5□□□□□ -0.89
VPS9D1-202ENST00000561976 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
VPS9D1-202ENST00000561976 MRAPQ8TCY5 172 aa9.5□□□□□ -0.89
VPS9D1-202ENST00000561976 DEFB135Q30KP9 77 aa9.49□□□□□ -0.89
VPS9D1-202ENST00000561976 DAD1P61803 113 aa9.49□□□□□ -0.89
VPS9D1-202ENST00000561976 HAMPP81172 84 aa9.49□□□□□ -0.89
VPS9D1-202ENST00000561976 C20orf197Q8N268 126 aa9.49□□□□□ -0.89
VPS9D1-202ENST00000561976 CYSRT1A8MQ03 144 aa9.48□□□□□ -0.89
VPS9D1-202ENST00000561976 Q6ZQY7 126 aa9.48□□□□□ -0.89
VPS9D1-202ENST00000561976 M0R2N4 97 aa9.47□□□□□ -0.89
VPS9D1-202ENST00000561976 KRTAP1-1Q07627 177 aa9.47□□□□□ -0.89
VPS9D1-202ENST00000561976 HTN3P15516 51 aa9.47□□□□□ -0.89
VPS9D1-202ENST00000561976 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.89
VPS9D1-202ENST00000561976 OXTP01178 125 aa9.45□□□□□ -0.9
VPS9D1-202ENST00000561976 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
VPS9D1-202ENST00000561976 LINC01547P58512 204 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-202ENST00000561976 KLK12Q9UKR0 248 aa9.45□□□□□ -0.9
VPS9D1-202ENST00000561976 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 Q6ZVQ6 151 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 TENM4Q6N022 2769 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 IGHV4-30-4P0DP06 118 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 MUC7Q8TAX7 377 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 XAGE1AQ9HD64 81 aa9.44□□□□□ -0.9
VPS9D1-202ENST00000561976 NDUFC2-KCTD14E9PQ53 114 aa9.42□□□□□ -0.9
VPS9D1-202ENST00000561976 DIRC1Q969H9 104 aa9.42□□□□□ -0.9
VPS9D1-202ENST00000561976 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
VPS9D1-202ENST00000561976 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
VPS9D1-202ENST00000561976 LELP1Q5T871 98 aa9.41□□□□□ -0.9
VPS9D1-202ENST00000561976 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
VPS9D1-202ENST00000561976 F8WDY8 70 aa9.41□□□□□ -0.9
VPS9D1-202ENST00000561976 PDE6GP18545 87 aa9.41□□□□□ -0.9
VPS9D1-202ENST00000561976 H3BQ85 93 aa9.4□□□□□ -0.91
VPS9D1-202ENST00000561976 APOC4P55056 127 aa9.4□□□□□ -0.91
VPS9D1-202ENST00000561976 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
VPS9D1-202ENST00000561976 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
VPS9D1-202ENST00000561976 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
VPS9D1-202ENST00000561976 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
VPS9D1-202ENST00000561976 COX7BP24311 80 aa9.39□□□□□ -0.91
VPS9D1-202ENST00000561976 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
VPS9D1-202ENST00000561976 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
VPS9D1-202ENST00000561976 C9orf66Q5T8R8 295 aa9.38□□□□□ -0.91
VPS9D1-202ENST00000561976 Q5XG85 94 aa9.38□□□□□ -0.91
VPS9D1-202ENST00000561976 BCE1O60756 84 aa9.37□□□□□ -0.91
VPS9D1-202ENST00000561976 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
VPS9D1-202ENST00000561976 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
VPS9D1-202ENST00000561976 CXCL6P80162 114 aa9.37□□□□□ -0.91
VPS9D1-202ENST00000561976 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
VPS9D1-202ENST00000561976 GVQW2A0A096LPI5 108 aaPredicted RBP9.36□□□□□ -0.91
VPS9D1-202ENST00000561976 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
VPS9D1-202ENST00000561976 SNURFQ9Y675 71 aa9.36□□□□□ -0.91
VPS9D1-202ENST00000561976 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 Q8NAQ8 132 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 HIVEP2P31629 2446 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 SMR3AQ99954 134 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 PRO0628Q9UI54 55 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 H7BZZ5 65 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 MIFP14174 115 aa9.35□□□□□ -0.91
VPS9D1-202ENST00000561976 VWFP04275 2813 aa9.34□□□□□ -0.91
VPS9D1-202ENST00000561976 CAMK2N2Q96S95 79 aa9.34□□□□□ -0.91
VPS9D1-202ENST00000561976 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
VPS9D1-202ENST00000561976 ELOF1P60002 83 aaKnown RBP9.34□□□□□ -0.91
VPS9D1-202ENST00000561976 PDZD2O15018 2839 aa9.33□□□□□ -0.92
VPS9D1-202ENST00000561976 KMT2BQ9UMN6 2715 aaPredicted RBP9.33□□□□□ -0.92
VPS9D1-202ENST00000561976 RMI2Q96E14 147 aa9.33□□□□□ -0.92
VPS9D1-202ENST00000561976 ANK3Q12955 4377 aaKnown RBP9.32□□□□□ -0.92
VPS9D1-202ENST00000561976 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
VPS9D1-202ENST00000561976 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
VPS9D1-202ENST00000561976 VPREB1P12018 145 aa9.3□□□□□ -0.92
VPS9D1-202ENST00000561976 SEC61GP60059 68 aa9.3□□□□□ -0.92
VPS9D1-202ENST00000561976 HELZ2Q9BYK8 2649 aaKnown RBP9.3□□□□□ -0.92
VPS9D1-202ENST00000561976 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
VPS9D1-202ENST00000561976 F8WEM9 126 aa9.29□□□□□ -0.92
VPS9D1-202ENST00000561976 SERP1Q9Y6X1 66 aa9.29□□□□□ -0.92
VPS9D1-202ENST00000561976 M0R378 163 aa9.29□□□□□ -0.92
VPS9D1-202ENST00000561976 LINC00336Q6ZUF6 198 aa9.29□□□□□ -0.92
VPS9D1-202ENST00000561976 TRBV7-6A0A0J9YX20 115 aa9.29□□□□□ -0.92
VPS9D1-202ENST00000561976 Q6ZRU5 148 aa9.28□□□□□ -0.92
VPS9D1-202ENST00000561976 WFDC10BQ8IUB3 73 aa9.28□□□□□ -0.92
VPS9D1-202ENST00000561976 EGFEM1PQ0D2K5 195 aa9.27□□□□□ -0.93
VPS9D1-202ENST00000561976 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
VPS9D1-202ENST00000561976 Q8N9L7 120 aa9.25□□□□□ -0.93
VPS9D1-202ENST00000561976 BPY2O14599 106 aa9.25□□□□□ -0.93
VPS9D1-202ENST00000561976 NREPQ16612 68 aa9.25□□□□□ -0.93
VPS9D1-202ENST00000561976 V9GYY9 64 aa9.25□□□□□ -0.93
VPS9D1-202ENST00000561976 J3QKU1 62 aa9.23□□□□□ -0.93
VPS9D1-202ENST00000561976 KPRPQ5T749 579 aaPredicted RBP9.23□□□□□ -0.93
VPS9D1-202ENST00000561976 DEFB105AQ8NG35 78 aa9.23□□□□□ -0.93
VPS9D1-202ENST00000561976 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
VPS9D1-202ENST00000561976 EPM2AB3EWF7 344 aa9.22□□□□□ -0.93
VPS9D1-202ENST00000561976 NDUFC1O43677 76 aa9.22□□□□□ -0.93
VPS9D1-202ENST00000561976 C3orf84H3BNL1 204 aa9.21□□□□□ -0.93
VPS9D1-202ENST00000561976 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.94
VPS9D1-202ENST00000561976 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
VPS9D1-202ENST00000561976 Q6ZRP5 223 aa9.21□□□□□ -0.94
VPS9D1-202ENST00000561976 TMEM254Q8TBM7 123 aa9.2□□□□□ -0.94
VPS9D1-202ENST00000561976 FASNP49327 2511 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms