RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 ATP5LO75964 103 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 PRSS2P07478 247 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 G0S2P27469 103 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 UBE2BP63146 152 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 KIAA0087Q14695 138 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 SPATA45Q537H7 98 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 ORMDL2Q53FV1 153 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 LINC00469Q8N7U9 141 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 MIEN1Q9BRT3 115 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 VCX2Q9H322 139 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 PAM16Q9Y3D7 125 aa5.05□□□□□ -1.6
GINS3-204ENST00000561952 F8WDY8 70 aa5.04□□□□□ -1.6
GINS3-204ENST00000561952 TLX1NBP0CAT3 122 aa5.04□□□□□ -1.6
GINS3-204ENST00000561952 IGLC3P0DOY3 106 aa5.04□□□□□ -1.6
GINS3-204ENST00000561952 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
GINS3-204ENST00000561952 TOMM6Q96B49 74 aa5.04□□□□□ -1.6
GINS3-204ENST00000561952 TRBV30A0A0K0K1B3 111 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 CKS1BP61024 79 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 CTAG1AP78358 180 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 C9orf129Q5T035 196 aaKnown RBP5.03□□□□□ -1.6
GINS3-204ENST00000561952 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 C14orf144Q96I85 54 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 AMELXQ99217 191 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 LPAP08519 4548 aa5.03□□□□□ -1.6
GINS3-204ENST00000561952 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 IGIPA6NJ69 53 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 NDUFC2-KCTD14E9PQ53 114 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 LBHQ53QV2 105 aaPredicted RBP5.02□□□□□ -1.61
GINS3-204ENST00000561952 C6orf226Q5I0X4 101 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 ATOH7Q8N100 152 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 PRR26Q8N8Z3 221 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 GEMIN7Q9H840 131 aaKnown RBP5.02□□□□□ -1.61
GINS3-204ENST00000561952 XAGE1AQ9HD64 81 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 UQCR10Q9UDW1 63 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 CDKN2A-AS1Q9UH64 79 aa5.02□□□□□ -1.61
GINS3-204ENST00000561952 ERASQ7Z444 233 aa5.01□□□□□ -1.61
GINS3-204ENST00000561952 SCGB3A1Q96QR1 104 aa5.01□□□□□ -1.61
GINS3-204ENST00000561952 HSBP1L1C9JCN9 74 aa5□□□□□ -1.61
GINS3-204ENST00000561952 H0Y9J4 135 aa5□□□□□ -1.61
GINS3-204ENST00000561952 HERVK_113P63121 156 aa5□□□□□ -1.61
GINS3-204ENST00000561952 Q8IZM0 81 aa5□□□□□ -1.61
GINS3-204ENST00000561952 LINC01561Q8N1V8 128 aa5□□□□□ -1.61
GINS3-204ENST00000561952 TIMM17AQ99595 171 aa5□□□□□ -1.61
GINS3-204ENST00000561952 H0Y8G0 127 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 DLEU1O43261 78 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 DPM2O94777 84 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 NPSP0C0P6 89 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 SPINK8P0C7L1 97 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 COX8AP10176 69 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 PAPPA-AS1Q5QFB9 102 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 PMCHL2Q9BQD1 86 aa4.99□□□□□ -1.61
GINS3-204ENST00000561952 SMIM1B2RUZ4 78 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 F8VRH5 84 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 M0R143 59 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 IGKCP01834 107 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 PLNP26678 52 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 SEC11AP67812 179 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 ANKRD39Q53RE8 183 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 SLC25A34Q6PIV7 304 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 FAM19A3Q7Z5A8 133 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 SNHG12Q9BXW3 62 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
GINS3-204ENST00000561952 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
GINS3-204ENST00000561952 BOD1L2Q8IYS8 172 aa4.97□□□□□ -1.61
GINS3-204ENST00000561952 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
GINS3-204ENST00000561952 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
GINS3-204ENST00000561952 TINCRA0A1B0GVN0 87 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 GAGE10A6NGK3 116 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 KRTAP1-4P0C5Y4 121 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 CXCL5P42830 114 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 PMVKQ15126 192 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 CST9LQ9H4G1 147 aa4.96□□□□□ -1.62
GINS3-204ENST00000561952 MRPL55Q7Z7F7 128 aaKnown RBP4.95□□□□□ -1.62
GINS3-204ENST00000561952 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
GINS3-204ENST00000561952 ZNF861PO60384 105 aa4.94□□□□□ -1.62
GINS3-204ENST00000561952 C2orf91Q6ZV80 131 aa4.94□□□□□ -1.62
GINS3-204ENST00000561952 HIGD1BQ9P298 99 aa4.94□□□□□ -1.62
GINS3-204ENST00000561952 IGLV5-45A0A087WSX0 123 aa4.93□□□□□ -1.62
GINS3-204ENST00000561952 IGKV2D-26A0A0A0MRZ7 120 aa4.93□□□□□ -1.62
GINS3-204ENST00000561952 H3BRM9 83 aa4.93□□□□□ -1.62
GINS3-204ENST00000561952 PFN2P35080 140 aa4.93□□□□□ -1.62
GINS3-204ENST00000561952 NKAPP1Q8N9T2 125 aa4.93□□□□□ -1.62
GINS3-204ENST00000561952 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
GINS3-204ENST00000561952 IGKV2-28A0A075B6P5 120 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 C11orf86A6NJI1 115 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 E9PLD3 99 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 BCE1O60756 84 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 TSPAN13O95857 204 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 IGKV2D-28P01615 120 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 PRR4Q16378 134 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 PCP2Q8IVA1 136 aa4.92□□□□□ -1.62
GINS3-204ENST00000561952 ZNF625Q96I27 306 aaPredicted RBP4.92□□□□□ -1.62
GINS3-204ENST00000561952 ZNF22P17026 224 aaPredicted RBP4.91□□□□□ -1.62
GINS3-204ENST00000561952 RPL13AP40429 203 aaKnown RBP4.91□□□□□ -1.62
GINS3-204ENST00000561952 RPL28P46779 137 aaKnown RBP4.91□□□□□ -1.62
GINS3-204ENST00000561952 NMUP48645 174 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms