RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 Q86TA4 180 aa5.55□□□□□ -1.52
PALB2-202ENST00000561514 TMEM75Q8N9X5 138 aa5.55□□□□□ -1.52
PALB2-202ENST00000561514 A0A0U1RRA0 63 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 ZNF815PA8K554 130 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 IGLV2-11P01706 119 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
PALB2-202ENST00000561514 ARMS2P0C7Q2 107 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 RNASE3P12724 160 aaKnown RBP5.54□□□□□ -1.52
PALB2-202ENST00000561514 ZNF80P51504 273 aaPredicted RBP5.54□□□□□ -1.52
PALB2-202ENST00000561514 CD164Q04900 197 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 MRPL51Q4U2R6 128 aaKnown RBP5.54□□□□□ -1.52
PALB2-202ENST00000561514 Q9HAA7 133 aa5.54□□□□□ -1.52
PALB2-202ENST00000561514 LOC389332A0A1B0GUA5 103 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 IGHV3-30P01768 117 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 IGHV3-33P01772 117 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 IGHV3-30-5P0DP03 117 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 COX8CQ7Z4L0 72 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 DPH3P1Q9H4G8 78 aa5.53□□□□□ -1.52
PALB2-202ENST00000561514 MRPL35Q9NZE8 188 aaKnown RBP5.53□□□□□ -1.52
PALB2-202ENST00000561514 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 TRAV8-3A0A0A6YYJ7 113 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 TEX49A0A1B0GTD5 131 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 hADV29S1A0JD25 119 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 Q8N3U1 123 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 DEFB104AQ8WTQ1 72 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 CNFNQ9BYD5 112 aa5.52□□□□□ -1.53
PALB2-202ENST00000561514 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
PALB2-202ENST00000561514 PKIGQ9Y2B9 76 aa5.51□□□□□ -1.53
PALB2-202ENST00000561514 IGKV3D-20A0A0C4DH25 116 aa5.5□□□□□ -1.53
PALB2-202ENST00000561514 NDUFC1O43677 76 aa5.5□□□□□ -1.53
PALB2-202ENST00000561514 ATP5EP2Q5VTU8 51 aa5.5□□□□□ -1.53
PALB2-202ENST00000561514 DAZ4Q86SG3 579 aaKnown RBP5.5□□□□□ -1.53
PALB2-202ENST00000561514 CHCHD7Q9BUK0 85 aa5.5□□□□□ -1.53
PALB2-202ENST00000561514 DAZ3Q9NR90 486 aaKnown RBP5.5□□□□□ -1.53
PALB2-202ENST00000561514 IGHV3-73A0A0B4J1V6 119 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 PPP1R17O96001 155 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 OXTP01178 125 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 SERTAD4-AS1Q5TG53 156 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 Q6JHZ5 121 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 NEXN-AS1Q8NBZ9 246 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 TTTY13Q9BZ97 58 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 Q9UF83 564 aa5.49□□□□□ -1.53
PALB2-202ENST00000561514 SDHAF1A6NFY7 115 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 H3BS24 57 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 LST1O00453 97 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 LECT2O14960 151 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 Q1RN00 199 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 C14orf178Q8N769 122 aaPredicted RBP5.48□□□□□ -1.53
PALB2-202ENST00000561514 RMI2Q96E14 147 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
PALB2-202ENST00000561514 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
PALB2-202ENST00000561514 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
PALB2-202ENST00000561514 H7C423 109 aa5.47□□□□□ -1.53
PALB2-202ENST00000561514 FAM19A1Q7Z5A9 133 aa5.47□□□□□ -1.53
PALB2-202ENST00000561514 CIRBP-AS1Q8TBR5 109 aa5.47□□□□□ -1.53
PALB2-202ENST00000561514 TRBV10-1A0A0K0K1A3 114 aa5.46□□□□□ -1.54
PALB2-202ENST00000561514 LYZL1Q6UWQ5 148 aa5.46□□□□□ -1.54
PALB2-202ENST00000561514 PRNTQ86SH4 94 aa5.46□□□□□ -1.54
PALB2-202ENST00000561514 TOMM6Q96B49 74 aa5.46□□□□□ -1.54
PALB2-202ENST00000561514 TRBV7-6A0A0J9YX20 115 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 TMEM223A0PJW6 202 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 S100A4P26447 101 aaKnown RBP5.45□□□□□ -1.54
PALB2-202ENST00000561514 CRIP1P50238 77 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 Q6ZRU5 148 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 PRR15Q8IV56 129 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 TMEM243Q9BU79 118 aa5.45□□□□□ -1.54
PALB2-202ENST00000561514 IGKV2D-24A0A075B6R9 120 aa5.44□□□□□ -1.54
PALB2-202ENST00000561514 C14orf177Q52M58 125 aa5.44□□□□□ -1.54
PALB2-202ENST00000561514 TMEM141Q96I45 108 aa5.44□□□□□ -1.54
PALB2-202ENST00000561514 SCGB3A1Q96QR1 104 aa5.44□□□□□ -1.54
PALB2-202ENST00000561514 TIMM21Q9BVV7 248 aa5.44□□□□□ -1.54
PALB2-202ENST00000561514 KLK12Q9UKR0 248 aa5.44□□□□□ -1.54
PALB2-202ENST00000561514 TNXBP22105 4242 aa5.43□□□□□ -1.54
PALB2-202ENST00000561514 TRAV26-2A0A0B4J265 109 aa5.43□□□□□ -1.54
PALB2-202ENST00000561514 TRBV10-3A0A0K0K1G6 114 aa5.43□□□□□ -1.54
PALB2-202ENST00000561514 SH2D1AO60880 128 aa5.43□□□□□ -1.54
PALB2-202ENST00000561514 LGALS3P17931 250 aaKnown RBP5.43□□□□□ -1.54
PALB2-202ENST00000561514 ENHOQ6UWT2 76 aa5.43□□□□□ -1.54
PALB2-202ENST00000561514 RNF185Q96GF1 192 aa5.43□□□□□ -1.54
PALB2-202ENST00000561514 TRBV6-8A0A0A6YYG3 113 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 M0R381 172 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 TRIAP1O43715 76 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 ZNF22P17026 224 aaPredicted RBP5.42□□□□□ -1.54
PALB2-202ENST00000561514 RPL36AP83881 106 aaKnown RBP5.42□□□□□ -1.54
PALB2-202ENST00000561514 KRTAP26-1Q6PEX3 210 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 SFTA2Q6UW10 78 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 RPL36ALQ969Q0 106 aaKnown RBP5.42□□□□□ -1.54
PALB2-202ENST00000561514 SMIM2Q9BVW6 85 aa5.42□□□□□ -1.54
PALB2-202ENST00000561514 A0A087WWL8 130 aa5.41□□□□□ -1.54
PALB2-202ENST00000561514 A0A0J9YXY3 114 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms