RNA–Protein interactions for RNA: ENST00000561290.1

CRTC3-214, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-214ENST00000561290 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
CRTC3-214ENST00000561290 PRR4Q16378 134 aa8.49□□□□□ -1.05
CRTC3-214ENST00000561290 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
CRTC3-214ENST00000561290 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
CRTC3-214ENST00000561290 TRGC2P03986 189 aa8.48□□□□□ -1.05
CRTC3-214ENST00000561290 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
CRTC3-214ENST00000561290 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
CRTC3-214ENST00000561290 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
CRTC3-214ENST00000561290 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.06
CRTC3-214ENST00000561290 Q8NDZ9 215 aa8.46□□□□□ -1.06
CRTC3-214ENST00000561290 M0R378 163 aa8.45□□□□□ -1.06
CRTC3-214ENST00000561290 CTAG1AP78358 180 aa8.45□□□□□ -1.06
CRTC3-214ENST00000561290 PRLHP81277 87 aa8.45□□□□□ -1.06
CRTC3-214ENST00000561290 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
CRTC3-214ENST00000561290 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
CRTC3-214ENST00000561290 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
CRTC3-214ENST00000561290 TSPAN13O95857 204 aa8.44□□□□□ -1.06
CRTC3-214ENST00000561290 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
CRTC3-214ENST00000561290 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BKO60814 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BJP06899 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BOP23527 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BBP33778 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 AKR1D1P51857 326 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BDP58876 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BCP62807 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST2H2BEQ16778 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BHQ93079 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BNQ99877 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 HIST1H2BMQ99879 126 aa8.43□□□□□ -1.06
CRTC3-214ENST00000561290 LINC00158P58513 81 aa8.42□□□□□ -1.06
CRTC3-214ENST00000561290 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
CRTC3-214ENST00000561290 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
CRTC3-214ENST00000561290 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
CRTC3-214ENST00000561290 HERV-K104P63124 156 aa8.41□□□□□ -1.06
CRTC3-214ENST00000561290 LINC00587B1AMM8 73 aa8.4□□□□□ -1.06
CRTC3-214ENST00000561290 HSBP1O75506 76 aa8.4□□□□□ -1.06
CRTC3-214ENST00000561290 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.06
CRTC3-214ENST00000561290 S100A2P29034 98 aa8.39□□□□□ -1.07
CRTC3-214ENST00000561290 PRYO14603 147 aa8.38□□□□□ -1.07
CRTC3-214ENST00000561290 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
CRTC3-214ENST00000561290 A0A0U1RRA0 63 aa8.37□□□□□ -1.07
CRTC3-214ENST00000561290 SMIM13P0DJ93 91 aa8.37□□□□□ -1.07
CRTC3-214ENST00000561290 MIR7-3HGQ8N6C7 128 aa8.37□□□□□ -1.07
CRTC3-214ENST00000561290 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
CRTC3-214ENST00000561290 SPRR1AP35321 89 aa8.36□□□□□ -1.07
CRTC3-214ENST00000561290 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
CRTC3-214ENST00000561290 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
CRTC3-214ENST00000561290 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
CRTC3-214ENST00000561290 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
CRTC3-214ENST00000561290 MUC2Q02817 5179 aa8.35□□□□□ -1.07
CRTC3-214ENST00000561290 MYMXA0A1B0GTQ4 84 aa8.35□□□□□ -1.07
CRTC3-214ENST00000561290 SPRR4Q96PI1 79 aa8.35□□□□□ -1.07
CRTC3-214ENST00000561290 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
CRTC3-214ENST00000561290 KCNQ1DNQ9H478 68 aa8.35□□□□□ -1.07
CRTC3-214ENST00000561290 ZNF706Q9Y5V0 76 aaPredicted RBP8.35□□□□□ -1.07
CRTC3-214ENST00000561290 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
CRTC3-214ENST00000561290 PLNP26678 52 aa8.34□□□□□ -1.07
CRTC3-214ENST00000561290 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
CRTC3-214ENST00000561290 HIST3H2BBQ8N257 126 aa8.34□□□□□ -1.07
CRTC3-214ENST00000561290 LOC107984156A0A0G2JMH3 177 aa8.33□□□□□ -1.08
CRTC3-214ENST00000561290 KRTAP4-16G5E9R7 235 aaPredicted RBP8.33□□□□□ -1.08
CRTC3-214ENST00000561290 SERF1AO75920 110 aa8.33□□□□□ -1.08
CRTC3-214ENST00000561290 LINC00310P59036 64 aa8.33□□□□□ -1.08
CRTC3-214ENST00000561290 COA6Q5JTJ3 125 aaKnown RBP8.33□□□□□ -1.08
CRTC3-214ENST00000561290 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
CRTC3-214ENST00000561290 ARL17AQ8IVW1 177 aa8.33□□□□□ -1.08
CRTC3-214ENST00000561290 C3orf22Q8N5N4 141 aa8.33□□□□□ -1.08
CRTC3-214ENST00000561290 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
CRTC3-214ENST00000561290 NCR3O14931 201 aa8.32□□□□□ -1.08
CRTC3-214ENST00000561290 LEPROTO15243 131 aa8.32□□□□□ -1.08
CRTC3-214ENST00000561290 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
CRTC3-214ENST00000561290 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
CRTC3-214ENST00000561290 FABP4P15090 132 aa8.31□□□□□ -1.08
CRTC3-214ENST00000561290 TSPEAR-AS2P59090 65 aa8.31□□□□□ -1.08
CRTC3-214ENST00000561290 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
CRTC3-214ENST00000561290 TRBV10-3A0A0K0K1G6 114 aa8.3□□□□□ -1.08
CRTC3-214ENST00000561290 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
CRTC3-214ENST00000561290 H0Y8G0 127 aa8.3□□□□□ -1.08
CRTC3-214ENST00000561290 NMUP48645 174 aa8.3□□□□□ -1.08
CRTC3-214ENST00000561290 S100A12P80511 92 aa8.3□□□□□ -1.08
CRTC3-214ENST00000561290 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
CRTC3-214ENST00000561290 DPM2O94777 84 aa8.29□□□□□ -1.08
CRTC3-214ENST00000561290 HERVK_113P61574 105 aa8.29□□□□□ -1.08
CRTC3-214ENST00000561290 LINC00518Q8N0U6 118 aa8.29□□□□□ -1.08
CRTC3-214ENST00000561290 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
CRTC3-214ENST00000561290 J3QQQ9 107 aa8.28□□□□□ -1.08
CRTC3-214ENST00000561290 LINC00483Q53H64 154 aa8.28□□□□□ -1.08
CRTC3-214ENST00000561290 C12orf57Q99622 126 aa8.28□□□□□ -1.08
CRTC3-214ENST00000561290 HIST1H2BLQ99880 126 aa8.28□□□□□ -1.08
CRTC3-214ENST00000561290 SMCR5Q8TEV8 140 aa8.27□□□□□ -1.09
CRTC3-214ENST00000561290 NDUFC2O95298 119 aa8.26□□□□□ -1.09
CRTC3-214ENST00000561290 IGKCP01834 107 aa8.26□□□□□ -1.09
CRTC3-214ENST00000561290 FP248Q71RG6 208 aaPredicted RBP8.26□□□□□ -1.09
CRTC3-214ENST00000561290 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
CRTC3-214ENST00000561290 SPANXB1Q9NS25 103 aaPredicted RBP8.26□□□□□ -1.09
CRTC3-214ENST00000561290 B5MCH6 92 aa8.25□□□□□ -1.09
CRTC3-214ENST00000561290 LGALS3P17931 250 aaKnown RBP8.25□□□□□ -1.09
CRTC3-214ENST00000561290 DDTP30046 118 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms