RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MAP1BP46821 2468 aaKnown RBP0.99□□□□□ -2.25
RTF1-207ENST00000561076 CEP250Q9BV73 2442 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 PTPRDP23468 1912 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 TCHHQ07283 1943 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 POLQO75417 2590 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 MED13Q9UHV7 2174 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 DNAH12Q6ZR08 3092 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 CNOT1A5YKK6 2376 aaKnown RBP0.98□□□□□ -2.25
RTF1-207ENST00000561076 SPTBN2O15020 2390 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 COL4A1P02462 1669 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 DCHS1Q96JQ0 3298 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 SETD2Q9BYW2 2564 aaPredicted RBP0.98□□□□□ -2.25
RTF1-207ENST00000561076 IQCF6A8MYZ5 107 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 CD52P31358 61 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP12-2P59991 146 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 C10orf99Q6UWK7 81 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 C18orf32Q8TCD1 76 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP4-11Q9BYQ6 195 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP4-9Q9BYQ8 210 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 PSENENQ9NZ42 101 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 REV3LO60673 3130 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 PLXNB2O15031 1838 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 PATJQ8NI35 1801 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 DOCK2Q92608 1830 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 PCNX2A6NKB5 2137 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 CREBBPQ92793 2442 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 CFAP46Q8IYW2 2715 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 NAV3Q8IVL0 2385 aa0.98□□□□□ -2.25
RTF1-207ENST00000561076 MYO18AQ92614 2054 aaKnown RBP0.98□□□□□ -2.25
RTF1-207ENST00000561076 HELZ2Q9BYK8 2649 aaKnown RBP0.98□□□□□ -2.25
RTF1-207ENST00000561076 TANC1Q9C0D5 1861 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 PLXNA4Q9HCM2 1894 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 ESPL1Q14674 2120 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 ZNF236Q9UL36 1845 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 A0A087WVE0 104 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 SPRR5A0A1B0GTR4 108 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 A0A1B0GUT8 65 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 PIN1P1O15428 100 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP10-3P60369 221 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 HAMPP81172 84 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP13-4Q3LI77 160 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP13-3Q3SY46 172 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 ATP5EP2Q5VTU8 51 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 TMEM263Q8WUH6 116 aaKnown RBP0.97□□□□□ -2.25
RTF1-207ENST00000561076 GNG13Q9P2W3 67 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 LOC285556D6RIA3 1793 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 SIPA1L3O60292 1781 aaPredicted RBP0.97□□□□□ -2.25
RTF1-207ENST00000561076 ICE1Q9Y2F5 2266 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 SPTAN1Q13813 2472 aaKnown RBP0.97□□□□□ -2.25
RTF1-207ENST00000561076 INTS1Q8N201 2190 aaKnown RBP0.97□□□□□ -2.25
RTF1-207ENST00000561076 COL4A4P53420 1690 aaPredicted RBP0.97□□□□□ -2.25
RTF1-207ENST00000561076 OTOGLQ3ZCN5 2332 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 NOTCH3Q9UM47 2321 aa0.97□□□□□ -2.25
RTF1-207ENST00000561076 JMJD1CQ15652 2540 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 CHD7Q9P2D1 2997 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 ASXL3Q9C0F0 2248 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 A0A1B0GUL6 1792 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 CHD9Q3L8U1 2897 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 SPTA1P02549 2419 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 DNAH14Q0VDD8 3507 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 A0A087WTM6 91 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 TRBV6-1A0A0K0K1D8 114 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 H0Y9P7 68 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 H3BVH4 76 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 ZNF137PP52743 207 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 Q6ZRX8 168 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 DEFB107AQ8IZN7 70 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 PLAC4Q8WY50 150 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 Q96NJ1 140 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 LINC00846Q9NV44 126 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 GBF1Q92538 1859 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 MYO15AQ9UKN7 3530 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 EXPH5Q8NEV8 1989 aa0.96□□□□□ -2.26
RTF1-207ENST00000561076 ZFYVE26Q68DK2 2539 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 SPTBP11277 2137 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 URB1O60287 2271 aaKnown RBP0.95□□□□□ -2.26
RTF1-207ENST00000561076 MYO7AQ13402 2215 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 TEX15Q9BXT5 2789 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 CR1P17927 2039 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 NDUFB1O75438 58 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 Q6JHZ5 121 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 HEPN1Q6WQI6 88 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 LINC01600Q96MT4 127 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP4-7Q9BYR0 210 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 FLNCQ14315 2725 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 LRRK2Q5S007 2527 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 BPTFQ12830 3046 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 DMXL1Q9Y485 3027 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 ABCA4P78363 2273 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 ASPMQ8IZT6 3477 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 SPG11Q96JI7 2443 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 FBN2P35556 2912 aa0.95□□□□□ -2.26
RTF1-207ENST00000561076 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 PCNX1Q96RV3 2341 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 PARP14Q460N5 1801 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 COL6A5A8TX70 2615 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 TET1Q8NFU7 2136 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 DLG5Q8TDM6 1919 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms