RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PRO0628Q9UI54 55 aa11.24□□□□□ -0.61
TPM1-228ENST00000560975 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
TPM1-228ENST00000560975 CCDC168Q8NDH2 2452 aa11.23□□□□□ -0.61
TPM1-228ENST00000560975 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
TPM1-228ENST00000560975 PRB1P04280 392 aa11.23□□□□□ -0.61
TPM1-228ENST00000560975 BBC3Q96PG8 261 aaPredicted RBP11.23□□□□□ -0.61
TPM1-228ENST00000560975 BCE1O60756 84 aa11.22□□□□□ -0.61
TPM1-228ENST00000560975 CD164L2Q6UWJ8 174 aa11.22□□□□□ -0.61
TPM1-228ENST00000560975 UNQ6190/PRO20217Q6UXQ8 127 aa11.22□□□□□ -0.61
TPM1-228ENST00000560975 SMIM26A0A096LP01 95 aa11.22□□□□□ -0.61
TPM1-228ENST00000560975 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
TPM1-228ENST00000560975 C16orf95Q9H693 158 aa11.21□□□□□ -0.61
TPM1-228ENST00000560975 MUC7Q8TAX7 377 aa11.21□□□□□ -0.62
TPM1-228ENST00000560975 C19orf73Q9NVV2 129 aa11.21□□□□□ -0.62
TPM1-228ENST00000560975 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
TPM1-228ENST00000560975 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
TPM1-228ENST00000560975 ZNF469Q96JG9 3925 aaPredicted RBP11.2□□□□□ -0.62
TPM1-228ENST00000560975 CXCL6P80162 114 aa11.19□□□□□ -0.62
TPM1-228ENST00000560975 REG3AQ06141 175 aa11.19□□□□□ -0.62
TPM1-228ENST00000560975 IGHV4-28A0A0C4DH34 117 aa11.18□□□□□ -0.62
TPM1-228ENST00000560975 Q8N9L7 120 aa11.18□□□□□ -0.62
TPM1-228ENST00000560975 MIFP14174 115 aa11.17□□□□□ -0.62
TPM1-228ENST00000560975 SPAG11BQ08648 103 aa11.16□□□□□ -0.62
TPM1-228ENST00000560975 CMC4P56277 68 aaPredicted RBP11.16□□□□□ -0.62
TPM1-228ENST00000560975 NREPQ16612 68 aa11.16□□□□□ -0.62
TPM1-228ENST00000560975 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
TPM1-228ENST00000560975 TRBV7-4A0A0J9YYF1 115 aa11.15□□□□□ -0.62
TPM1-228ENST00000560975 IGLV6-57P01721 117 aa11.15□□□□□ -0.62
TPM1-228ENST00000560975 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
TPM1-228ENST00000560975 C9orf66Q5T8R8 295 aa11.15□□□□□ -0.62
TPM1-228ENST00000560975 IGSF10Q6WRI0 2623 aa11.15□□□□□ -0.63
TPM1-228ENST00000560975 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
TPM1-228ENST00000560975 PDE6GP18545 87 aa11.14□□□□□ -0.63
TPM1-228ENST00000560975 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
TPM1-228ENST00000560975 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
TPM1-228ENST00000560975 DEFB4AO15263 64 aa11.14□□□□□ -0.63
TPM1-228ENST00000560975 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
TPM1-228ENST00000560975 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
TPM1-228ENST00000560975 BPY2O14599 106 aa11.13□□□□□ -0.63
TPM1-228ENST00000560975 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
TPM1-228ENST00000560975 TMEM254Q8TBM7 123 aa11.12□□□□□ -0.63
TPM1-228ENST00000560975 DIRC1Q969H9 104 aa11.12□□□□□ -0.63
TPM1-228ENST00000560975 FAM229BQ4G0N7 80 aa11.11□□□□□ -0.63
TPM1-228ENST00000560975 MTORP42345 2549 aa11.11□□□□□ -0.63
TPM1-228ENST00000560975 A0A0U1RQV1 116 aa11.11□□□□□ -0.63
TPM1-228ENST00000560975 NDUFC1O43677 76 aa11.11□□□□□ -0.63
TPM1-228ENST00000560975 COX7BP24311 80 aa11.09□□□□□ -0.63
TPM1-228ENST00000560975 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
TPM1-228ENST00000560975 ZNF73O43830 326 aaPredicted RBP11.08□□□□□ -0.64
TPM1-228ENST00000560975 DAD1P61803 113 aa11.08□□□□□ -0.64
TPM1-228ENST00000560975 LINC00612Q8N6U2 182 aa11.07□□□□□ -0.64
TPM1-228ENST00000560975 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
TPM1-228ENST00000560975 X6R8D5 127 aa11.06□□□□□ -0.64
TPM1-228ENST00000560975 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
TPM1-228ENST00000560975 IGHV4-30-4P0DP06 118 aa11.05□□□□□ -0.64
TPM1-228ENST00000560975 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
TPM1-228ENST00000560975 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
TPM1-228ENST00000560975 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
TPM1-228ENST00000560975 C6orf48Q9UBA6 75 aa11.04□□□□□ -0.64
TPM1-228ENST00000560975 ACANP16112 2415 aa11.04□□□□□ -0.64
TPM1-228ENST00000560975 PIEZO1Q92508 2521 aa11.04□□□□□ -0.64
TPM1-228ENST00000560975 H3BQ85 93 aa11.03□□□□□ -0.64
TPM1-228ENST00000560975 FLNAP21333 2647 aaKnown RBP11.03□□□□□ -0.64
TPM1-228ENST00000560975 C3orf84H3BNL1 204 aa11.02□□□□□ -0.64
TPM1-228ENST00000560975 IGKV4-1P06312 121 aa11.02□□□□□ -0.64
TPM1-228ENST00000560975 HTN3P15516 51 aa11.02□□□□□ -0.64
TPM1-228ENST00000560975 PRYO14603 147 aa11.02□□□□□ -0.65
TPM1-228ENST00000560975 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.65
TPM1-228ENST00000560975 DEFB113Q30KQ7 82 aa11.02□□□□□ -0.65
TPM1-228ENST00000560975 HIGD2AQ9BW72 106 aa11.02□□□□□ -0.65
TPM1-228ENST00000560975 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.65
TPM1-228ENST00000560975 HIGD2BQ4VC39 106 aa10.99□□□□□ -0.65
TPM1-228ENST00000560975 OCR1Q9BZK8 76 aa10.99□□□□□ -0.65
TPM1-228ENST00000560975 DEFB135Q30KP9 77 aa10.98□□□□□ -0.65
TPM1-228ENST00000560975 CELA1Q9UNI1 258 aa10.97□□□□□ -0.65
TPM1-228ENST00000560975 DEFB105AQ8NG35 78 aa10.97□□□□□ -0.65
TPM1-228ENST00000560975 ERC2-IT1O76042 136 aa10.96□□□□□ -0.65
TPM1-228ENST00000560975 HIVEP2P31629 2446 aa10.96□□□□□ -0.66
TPM1-228ENST00000560975 LRCOL1A6NCL2 159 aa10.95□□□□□ -0.66
TPM1-228ENST00000560975 ESRGQ1W209 222 aa10.95□□□□□ -0.66
TPM1-228ENST00000560975 FAM30AQ9NZY2 134 aa10.95□□□□□ -0.66
TPM1-228ENST00000560975 VPREB1P12018 145 aa10.95□□□□□ -0.66
TPM1-228ENST00000560975 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
TPM1-228ENST00000560975 Q6ZTC4 211 aa10.94□□□□□ -0.66
TPM1-228ENST00000560975 LYRM9A8MSI8 78 aa10.94□□□□□ -0.66
TPM1-228ENST00000560975 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
TPM1-228ENST00000560975 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
TPM1-228ENST00000560975 LINC00528Q8N1L1 170 aa10.93□□□□□ -0.66
TPM1-228ENST00000560975 KRTAP1-3Q8IUG1 177 aa10.92□□□□□ -0.66
TPM1-228ENST00000560975 LELP1Q5T871 98 aa10.91□□□□□ -0.66
TPM1-228ENST00000560975 SMIM29Q86T20 159 aa10.91□□□□□ -0.66
TPM1-228ENST00000560975 M0R378 163 aa10.91□□□□□ -0.66
TPM1-228ENST00000560975 VWFP04275 2813 aa10.9□□□□□ -0.66
TPM1-228ENST00000560975 PRR34Q9NV39 138 aa10.9□□□□□ -0.66
TPM1-228ENST00000560975 Q6ZRU5 148 aa10.88□□□□□ -0.67
TPM1-228ENST00000560975 V9GYY9 64 aa10.85□□□□□ -0.67
TPM1-228ENST00000560975 UNC79Q9P2D8 2635 aa10.84□□□□□ -0.67
TPM1-228ENST00000560975 Q8N377 158 aa10.83□□□□□ -0.68
TPM1-228ENST00000560975 F8WDY8 70 aa10.83□□□□□ -0.68
TPM1-228ENST00000560975 KPRPQ5T749 579 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms