RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 SMG1Q96Q15 3661 aaKnown RBP-1.73□□□□□ -2.69
PSMA4-221ENST00000560842 XRN1Q8IZH2 1706 aaKnown RBP-1.73□□□□□ -2.69
PSMA4-221ENST00000560842 A0A1B0GU69 56 aa-1.73□□□□□ -2.69
PSMA4-221ENST00000560842 DEFB1P60022 68 aa-1.73□□□□□ -2.69
PSMA4-221ENST00000560842 LELP1Q5T871 98 aa-1.73□□□□□ -2.69
PSMA4-221ENST00000560842 CSMD1Q96PZ7 3565 aa-1.73□□□□□ -2.69
PSMA4-221ENST00000560842 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 ADGRL2O95490 1459 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 EHBP1L1Q8N3D4 1523 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 FOCADQ5VW36 1801 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 F6UZH7 168 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 CCL22O00626 93 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 COX6CP09669 75 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 TRAPPC2P0DI81 140 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 TRAPPC2BP0DI82 140 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 SAA2P0DJI9 122 aaPredicted RBP-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 LINC00470Q9BZP3 86 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 CFAP46Q8IYW2 2715 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 CICQ96RK0 1608 aaPredicted RBP-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 UNC13AQ9UPW8 1703 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 MARF1Q9Y4F3 1742 aaKnown RBP-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 ANKRD50Q9ULJ7 1429 aa-1.74□□□□□ -2.69
PSMA4-221ENST00000560842 PLEKHH2Q8IVE3 1493 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 UBE2L5PA0A1B0GUS4 154 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 FAM223BA6NKX1 122 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 UBE2L3P68036 154 aaKnown RBP-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 KRTAP19-5Q3LI72 72 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 MRPL34Q9BQ48 92 aaKnown RBP-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 MANBALQ9NQG1 85 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 QRICH2Q9H0J4 1663 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 SPTBN5Q9NRC6 3674 aaKnown RBP-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 NAIPQ13075 1403 aa-1.75□□□□□ -2.69
PSMA4-221ENST00000560842 TRRAPQ9Y4A5 3859 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 TRAV30A0A087WSZ9 112 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 K7EP34 96 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 FGF7P21781 194 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 GNG11P61952 73 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 HEPN1Q6WQI6 88 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 WFDC13Q8IUB5 93 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 CDKN2A-AS1Q9UH64 79 aa-1.76□□□□□ -2.69
PSMA4-221ENST00000560842 MYO9AB2RTY4 2548 aa-1.77□□□□□ -2.69
PSMA4-221ENST00000560842 C12orf57Q99622 126 aa-1.77□□□□□ -2.69
PSMA4-221ENST00000560842 TLN2Q9Y4G6 2542 aa-1.77□□□□□ -2.69
PSMA4-221ENST00000560842 EYSQ5T1H1 3165 aa-1.77□□□□□ -2.69
PSMA4-221ENST00000560842 ANKRD36A6QL64 1941 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 OOSP1A8MZH6 123 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 GNG7O60262 68 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 MT1HL1P0DM35 61 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 SNCAP37840 140 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 Q0VG73 95 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 SFTA2Q6UW10 78 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 PRO1854Q9UHT4 67 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 NLRP1Q9C000 1473 aa-1.78□□□□□ -2.69
PSMA4-221ENST00000560842 DNAH17Q9UFH2 4485 aa-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 SPENQ96T58 3664 aaKnown RBP-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 MBD5Q9P267 1494 aa-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 ATP5EP56381 51 aaPredicted RBP-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 C6orf201Q7Z4U5 140 aa-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 DPH3P1Q9H4G8 78 aa-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 HIGD1BQ9P298 99 aa-1.79□□□□□ -2.7
PSMA4-221ENST00000560842 KNDC1Q76NI1 1749 aa-1.8□□□□□ -2.7
PSMA4-221ENST00000560842 EDC4Q6P2E9 1401 aaKnown RBP-1.8□□□□□ -2.7
PSMA4-221ENST00000560842 S4R3F8 94 aa-1.8□□□□□ -2.7
PSMA4-221ENST00000560842 PDCD11Q14690 1871 aaKnown RBP-1.8□□□□□ -2.7
PSMA4-221ENST00000560842 DNAH5Q8TE73 4624 aa-1.81□□□□□ -2.7
PSMA4-221ENST00000560842 MRC2Q9UBG0 1479 aa-1.81□□□□□ -2.7
PSMA4-221ENST00000560842 KTN1Q86UP2 1357 aaKnown RBP-1.81□□□□□ -2.7
PSMA4-221ENST00000560842 ROBO1Q9Y6N7 1651 aa-1.81□□□□□ -2.7
PSMA4-221ENST00000560842 FAM24AA6NFZ4 105 aa-1.82□□□□□ -2.7
PSMA4-221ENST00000560842 DEFB110Q30KQ9 67 aa-1.82□□□□□ -2.7
PSMA4-221ENST00000560842 DIP2CQ9Y2E4 1556 aa-1.82□□□□□ -2.7
PSMA4-221ENST00000560842 CLIP1P30622 1438 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 A0A087WVE0 104 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 A0A0G2JND7 137 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 NAP1L6A6NFF2 107 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 H3BQF6 201 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 AKAIN1P0CW23 69 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 NCOA3Q9Y6Q9 1424 aa-1.83□□□□□ -2.7
PSMA4-221ENST00000560842 MAP3K1Q13233 1512 aa-1.84□□□□□ -2.7
PSMA4-221ENST00000560842 VAMP8Q9BV40 100 aa-1.84□□□□□ -2.7
PSMA4-221ENST00000560842 DNAH10Q8IVF4 4471 aa-1.84□□□□□ -2.7
PSMA4-221ENST00000560842 BCORQ6W2J9 1755 aa-1.85□□□□□ -2.7
PSMA4-221ENST00000560842 NUP188Q5SRE5 1749 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 SCN7AQ01118 1682 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 SPTY2D1-AS1A0A0U1RR47 76 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 C7orf77A4D0Y5 90 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 SCAPERQ9BY12 1400 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 ITPR2Q14571 2701 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 ADGRG4Q8IZF6 3080 aa-1.85□□□□□ -2.71
PSMA4-221ENST00000560842 LRRC37AA6NMS7 1700 aa-1.86□□□□□ -2.71
PSMA4-221ENST00000560842 H0Y9P7 68 aa-1.86□□□□□ -2.71
PSMA4-221ENST00000560842 ARMS2P0C7Q2 107 aa-1.86□□□□□ -2.71
PSMA4-221ENST00000560842 PP6455Q8WZ26 134 aa-1.86□□□□□ -2.71
PSMA4-221ENST00000560842 RGPD2P0DJD1 1756 aa-1.86□□□□□ -2.71
PSMA4-221ENST00000560842 A2ML1A8K2U0 1454 aa-1.87□□□□□ -2.71
PSMA4-221ENST00000560842 GNGT1P63211 74 aa-1.87□□□□□ -2.71
PSMA4-221ENST00000560842 CCDC58Q4VC31 144 aa-1.87□□□□□ -2.71
PSMA4-221ENST00000560842 DMXL2Q8TDJ6 3036 aa-1.87□□□□□ -2.71
PSMA4-221ENST00000560842 DEFB107AQ8IZN7 70 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms