RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 LINC00643Q86TS7 51 aa0.5□□□□□ -2.33
CTDSPL2-207ENST00000559738 FXYD6Q9H0Q3 95 aa0.5□□□□□ -2.33
CTDSPL2-207ENST00000559738 PTPRQQ9UMZ3 2332 aa0.49□□□□□ -2.33
CTDSPL2-207ENST00000559738 LRRC7Q96NW7 1537 aa0.49□□□□□ -2.33
CTDSPL2-207ENST00000559738 DEFB109BQ30KR1 87 aa0.49□□□□□ -2.33
CTDSPL2-207ENST00000559738 CRIPTQ9P021 101 aa0.49□□□□□ -2.33
CTDSPL2-207ENST00000559738 LTN1O94822 1766 aa0.49□□□□□ -2.33
CTDSPL2-207ENST00000559738 ATP7BP35670 1465 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 ARHGAP35Q9NRY4 1499 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 BCORQ6W2J9 1755 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 A0A1B0GUT8 65 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 KANTRA0A1W2PQU2 76 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 COX8AP10176 69 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 SPRR1AP35321 89 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 Q5VSD8 79 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 S100A13Q99584 98 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 SPTBN1Q01082 2364 aaKnown RBP0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 DCAF1Q9Y4B6 1507 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 PKDREJQ9NTG1 2253 aa0.48□□□□□ -2.33
CTDSPL2-207ENST00000559738 AKAP6Q13023 2319 aa0.47□□□□□ -2.33
CTDSPL2-207ENST00000559738 ACYP1P07311 99 aa0.47□□□□□ -2.33
CTDSPL2-207ENST00000559738 SPRR1BP22528 89 aa0.47□□□□□ -2.33
CTDSPL2-207ENST00000559738 ADIRFQ15847 76 aa0.47□□□□□ -2.33
CTDSPL2-207ENST00000559738 GVINP1Q7Z2Y8 2422 aa0.47□□□□□ -2.33
CTDSPL2-207ENST00000559738 POLR1AO95602 1720 aaPredicted RBP0.47□□□□□ -2.33
CTDSPL2-207ENST00000559738 SPTY2D1-AS1A0A0U1RR47 76 aa0.46□□□□□ -2.34
CTDSPL2-207ENST00000559738 CEBPZOSA8MTT3 80 aa0.46□□□□□ -2.34
CTDSPL2-207ENST00000559738 I3L3M4 83 aa0.46□□□□□ -2.34
CTDSPL2-207ENST00000559738 ST20Q9HBF5 79 aa0.46□□□□□ -2.34
CTDSPL2-207ENST00000559738 ERVK-7P63135 1459 aa0.46□□□□□ -2.34
CTDSPL2-207ENST00000559738 UNC79Q9P2D8 2635 aa0.45□□□□□ -2.34
CTDSPL2-207ENST00000559738 CPSF4LA6NMK7 179 aaKnown RBP0.45□□□□□ -2.34
CTDSPL2-207ENST00000559738 NKTRP30414 1462 aaKnown RBP0.45□□□□□ -2.34
CTDSPL2-207ENST00000559738 OTOGQ6ZRI0 2925 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 ZNF831Q5JPB2 1677 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 DEFB105AQ8NG35 78 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 GAFA1Q96PS6 74 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 U3KQA8 63 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 PIK3C2BO00750 1634 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 TIAM2Q8IVF5 1701 aa0.44□□□□□ -2.34
CTDSPL2-207ENST00000559738 LRRC9Q6ZRR7 1453 aa0.43□□□□□ -2.34
CTDSPL2-207ENST00000559738 WFDC9Q8NEX5 89 aa0.43□□□□□ -2.34
CTDSPL2-207ENST00000559738 APLNQ9ULZ1 77 aa0.43□□□□□ -2.34
CTDSPL2-207ENST00000559738 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
CTDSPL2-207ENST00000559738 NCOR1O75376 2440 aa0.42□□□□□ -2.34
CTDSPL2-207ENST00000559738 COX7BP24311 80 aa0.42□□□□□ -2.34
CTDSPL2-207ENST00000559738 KLK9Q2XQG4 91 aa0.42□□□□□ -2.34
CTDSPL2-207ENST00000559738 PREX1Q8TCU6 1659 aa0.42□□□□□ -2.34
CTDSPL2-207ENST00000559738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.42□□□□□ -2.34
CTDSPL2-207ENST00000559738 KDM5DQ9BY66 1539 aa0.42□□□□□ -2.34
CTDSPL2-207ENST00000559738 MAST4O15021 2626 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 CHD6Q8TD26 2715 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 TRAV21A0A0B4J279 112 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 H3BUT2 72 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 MRPL34Q9BQ48 92 aaKnown RBP0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 URB2Q14146 1524 aaKnown RBP0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 RGPD8O14715 1765 aaPredicted RBP0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 RGPD5Q99666 1765 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 DOT1LQ8TEK3 1739 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 LRRIQ1Q96JM4 1722 aa0.41□□□□□ -2.34
CTDSPL2-207ENST00000559738 NCOR2Q9Y618 2525 aa0.4□□□□□ -2.34
CTDSPL2-207ENST00000559738 VWFP04275 2813 aa0.4□□□□□ -2.35
CTDSPL2-207ENST00000559738 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
CTDSPL2-207ENST00000559738 ARFGEF2Q9Y6D5 1785 aa0.4□□□□□ -2.35
CTDSPL2-207ENST00000559738 USP32Q8NFA0 1604 aa0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 RPL38P63173 70 aaKnown RBP0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 NCOA2Q15596 1464 aa0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 CFAP74Q9C0B2 1584 aa0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 SCN11AQ9UI33 1791 aa0.39□□□□□ -2.35
CTDSPL2-207ENST00000559738 CFAP43Q8NDM7 1665 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 CEP170BQ9Y4F5 1589 aaPredicted RBP0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 SPINK4O60575 86 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 NDUFB1O75438 58 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 H1FX-AS1Q4G0G2 97 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 BVES-AS1Q5T3Y7 98 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 HEPN1Q6WQI6 88 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 CLIP1P30622 1438 aa0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 RRBP1Q9P2E9 1410 aaKnown RBP0.38□□□□□ -2.35
CTDSPL2-207ENST00000559738 TNRC6CQ9HCJ0 1690 aaKnown RBP0.37□□□□□ -2.35
CTDSPL2-207ENST00000559738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.37□□□□□ -2.351e-6■■■□□ 14.9
CTDSPL2-207ENST00000559738 CSPG4Q6UVK1 2322 aa0.37□□□□□ -2.35
CTDSPL2-207ENST00000559738 CCL22O00626 93 aa0.37□□□□□ -2.35
CTDSPL2-207ENST00000559738 WNK2Q9Y3S1 2297 aa0.37□□□□□ -2.35
CTDSPL2-207ENST00000559738 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
CTDSPL2-207ENST00000559738 ABCC1P33527 1531 aa0.37□□□□□ -2.35
CTDSPL2-207ENST00000559738 A0A087WXM4 84 aa0.36□□□□□ -2.35
CTDSPL2-207ENST00000559738 MAGI3Q5TCQ9 1506 aa0.36□□□□□ -2.35
CTDSPL2-207ENST00000559738 ATRQ13535 2644 aa0.36□□□□□ -2.35
CTDSPL2-207ENST00000559738 SPTA1P02549 2419 aa0.36□□□□□ -2.35
CTDSPL2-207ENST00000559738 PTPN23Q9H3S7 1636 aa0.35□□□□□ -2.35
CTDSPL2-207ENST00000559738 LOC730098B7Z3J9 87 aa0.35□□□□□ -2.35
CTDSPL2-207ENST00000559738 ATP5EP2Q5VTU8 51 aa0.35□□□□□ -2.35
CTDSPL2-207ENST00000559738 TENM4Q6N022 2769 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms