RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ATP5LO75964 103 aa7.36□□□□□ -1.23
TPM1-216ENST00000558910 CXCL5P42830 114 aa7.36□□□□□ -1.23
TPM1-216ENST00000558910 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
TPM1-216ENST00000558910 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
TPM1-216ENST00000558910 C22orf24Q9Y442 160 aa7.36□□□□□ -1.23
TPM1-216ENST00000558910 SRSF9Q13242 221 aaKnown RBP eCLIP7.35□□□□□ -1.23
TPM1-216ENST00000558910 A0A0U1RRA0 63 aa7.34□□□□□ -1.23
TPM1-216ENST00000558910 RPL37AP8A6NKH3 93 aa7.34□□□□□ -1.23
TPM1-216ENST00000558910 HSBP1O75506 76 aa7.34□□□□□ -1.23
TPM1-216ENST00000558910 SCO1O75880 301 aa7.34□□□□□ -1.23
TPM1-216ENST00000558910 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
TPM1-216ENST00000558910 IFI27L1Q96BM0 104 aa7.34□□□□□ -1.23
TPM1-216ENST00000558910 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
TPM1-216ENST00000558910 CHCHD1Q96BP2 118 aaKnown RBP7.33□□□□□ -1.24
TPM1-216ENST00000558910 LINC01600Q96MT4 127 aa7.33□□□□□ -1.24
TPM1-216ENST00000558910 SERF1AO75920 110 aa7.31□□□□□ -1.24
TPM1-216ENST00000558910 FABP4P15090 132 aa7.31□□□□□ -1.24
TPM1-216ENST00000558910 IGLV5-39A0A0G2JS06 123 aa7.3□□□□□ -1.24
TPM1-216ENST00000558910 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
TPM1-216ENST00000558910 MRPL55Q7Z7F7 128 aaKnown RBP7.3□□□□□ -1.24
TPM1-216ENST00000558910 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
TPM1-216ENST00000558910 DIRC1Q969H9 104 aa7.3□□□□□ -1.24
TPM1-216ENST00000558910 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
TPM1-216ENST00000558910 NUPR1O60356 82 aa7.29□□□□□ -1.24
TPM1-216ENST00000558910 LINC00158P58513 81 aa7.29□□□□□ -1.24
TPM1-216ENST00000558910 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
TPM1-216ENST00000558910 PMCHL2Q9BQD1 86 aa7.29□□□□□ -1.24
TPM1-216ENST00000558910 ERG28Q9UKR5 140 aa7.29□□□□□ -1.24
TPM1-216ENST00000558910 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
TPM1-216ENST00000558910 COLCA2A8K830 154 aa7.28□□□□□ -1.24
TPM1-216ENST00000558910 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
TPM1-216ENST00000558910 TMEM223A0PJW6 202 aa7.27□□□□□ -1.25
TPM1-216ENST00000558910 H0Y9J4 135 aa7.27□□□□□ -1.25
TPM1-216ENST00000558910 LEPROTL1O95214 131 aa7.27□□□□□ -1.25
TPM1-216ENST00000558910 SND1-IT1Q9HBX3 110 aa7.27□□□□□ -1.25
TPM1-216ENST00000558910 TRAV12-1A0A0B4J245 112 aa7.26□□□□□ -1.25
TPM1-216ENST00000558910 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
TPM1-216ENST00000558910 ATP6V1G1O75348 118 aa7.25□□□□□ -1.25
TPM1-216ENST00000558910 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
TPM1-216ENST00000558910 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
TPM1-216ENST00000558910 ZNF861PO60384 105 aa7.23□□□□□ -1.25
TPM1-216ENST00000558910 UBE2AP49459 152 aa7.23□□□□□ -1.25
TPM1-216ENST00000558910 Q8NDZ9 215 aa7.23□□□□□ -1.25
TPM1-216ENST00000558910 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
TPM1-216ENST00000558910 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
TPM1-216ENST00000558910 BCE1O60756 84 aa7.22□□□□□ -1.25
TPM1-216ENST00000558910 VPREB1P12018 145 aa7.22□□□□□ -1.25
TPM1-216ENST00000558910 ANAPC11Q9NYG5 84 aa7.22□□□□□ -1.25
TPM1-216ENST00000558910 HSPB8Q9UJY1 196 aa7.22□□□□□ -1.25
TPM1-216ENST00000558910 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
TPM1-216ENST00000558910 NDUFA12Q9UI09 145 aa7.21□□□□□ -1.26
TPM1-216ENST00000558910 NCR3O14931 201 aa7.2□□□□□ -1.26
TPM1-216ENST00000558910 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
TPM1-216ENST00000558910 PRLHP81277 87 aa7.2□□□□□ -1.26
TPM1-216ENST00000558910 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
TPM1-216ENST00000558910 COX17Q14061 63 aa7.2□□□□□ -1.26
TPM1-216ENST00000558910 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
TPM1-216ENST00000558910 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
TPM1-216ENST00000558910 DAND5Q8N907 189 aa7.2□□□□□ -1.26
TPM1-216ENST00000558910 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
TPM1-216ENST00000558910 DPM2O94777 84 aa7.19□□□□□ -1.26
TPM1-216ENST00000558910 KRTAP1-4P0C5Y4 121 aa7.19□□□□□ -1.26
TPM1-216ENST00000558910 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
TPM1-216ENST00000558910 MAP1LC3CQ9BXW4 147 aa7.19□□□□□ -1.26
TPM1-216ENST00000558910 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BKO60814 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 IGKCP01834 107 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BJP06899 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BOP23527 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BBP33778 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BDP58876 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HERVK_113P61574 105 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BCP62807 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST2H2BEQ16778 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BHQ93079 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BNQ99877 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 HIST1H2BMQ99879 126 aa7.18□□□□□ -1.26
TPM1-216ENST00000558910 IGLV1-50A0A075B6I6 118 aa7.17□□□□□ -1.26
TPM1-216ENST00000558910 LEPROTO15243 131 aa7.17□□□□□ -1.26
TPM1-216ENST00000558910 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
TPM1-216ENST00000558910 PLNP26678 52 aa7.17□□□□□ -1.26
TPM1-216ENST00000558910 NPC2P61916 151 aa7.17□□□□□ -1.26
TPM1-216ENST00000558910 SFTA2Q6UW10 78 aa7.17□□□□□ -1.26
TPM1-216ENST00000558910 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
TPM1-216ENST00000558910 LRP2P98164 4655 aa7.16□□□□□ -1.26
TPM1-216ENST00000558910 J3QQQ9 107 aa7.16□□□□□ -1.26
TPM1-216ENST00000558910 TSPAN13O95857 204 aa7.16□□□□□ -1.26
TPM1-216ENST00000558910 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
TPM1-216ENST00000558910 S100A6P06703 90 aa7.15□□□□□ -1.26
TPM1-216ENST00000558910 HERV-K104P63124 156 aa7.15□□□□□ -1.26
TPM1-216ENST00000558910 A0A087X002 238 aa7.14□□□□□ -1.27
TPM1-216ENST00000558910 M0R378 163 aa7.14□□□□□ -1.27
TPM1-216ENST00000558910 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
TPM1-216ENST00000558910 SYS1-DBNDD2H3BUS1 97 aa7.13□□□□□ -1.27
TPM1-216ENST00000558910 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
TPM1-216ENST00000558910 AKR1D1P51857 326 aa7.12□□□□□ -1.27
TPM1-216ENST00000558910 KRTDAPP60985 99 aa7.12□□□□□ -1.27
TPM1-216ENST00000558910 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
TPM1-216ENST00000558910 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms