RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 A6NJY4 79 aa10.22□□□□□ -0.77
CDC42BPB-203ENST00000558867 SRSF9Q13242 221 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDC42BPB-203ENST00000558867 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPB-203ENST00000558867 TAX1BP3O14907 124 aa10.21□□□□□ -0.77
CDC42BPB-203ENST00000558867 Q8IZM0 81 aa10.21□□□□□ -0.77
CDC42BPB-203ENST00000558867 C7orf33Q8WU49 177 aa10.21□□□□□ -0.77
CDC42BPB-203ENST00000558867 COX7A2LO14548 114 aa10.2□□□□□ -0.78
CDC42BPB-203ENST00000558867 XCL1P47992 114 aa10.2□□□□□ -0.78
CDC42BPB-203ENST00000558867 PTTG1IPP53801 180 aa10.2□□□□□ -0.78
CDC42BPB-203ENST00000558867 A0A1B0GV90 55 aa10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 IFITM1P13164 125 aa10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 FOXI1Q12951 378 aa10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
CDC42BPB-203ENST00000558867 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
CDC42BPB-203ENST00000558867 CXCL5P42830 114 aa10.18□□□□□ -0.78
CDC42BPB-203ENST00000558867 LRP2P98164 4655 aa10.18□□□□□ -0.78
CDC42BPB-203ENST00000558867 PANO1I0J062 215 aa10.17□□□□□ -0.78
CDC42BPB-203ENST00000558867 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
CDC42BPB-203ENST00000558867 APOMO95445 188 aa10.16□□□□□ -0.78
CDC42BPB-203ENST00000558867 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
CDC42BPB-203ENST00000558867 A0A087WYN8 130 aa10.15□□□□□ -0.78
CDC42BPB-203ENST00000558867 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
CDC42BPB-203ENST00000558867 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.78
CDC42BPB-203ENST00000558867 NHP2Q9NX24 153 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-203ENST00000558867 TNXBP22105 4242 aa10.14□□□□□ -0.79
CDC42BPB-203ENST00000558867 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
CDC42BPB-203ENST00000558867 C9orf118A6NHY6 69 aa10.14□□□□□ -0.79
CDC42BPB-203ENST00000558867 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
CDC42BPB-203ENST00000558867 LINC01600Q96MT4 127 aa10.14□□□□□ -0.79
CDC42BPB-203ENST00000558867 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 PRSS2P07478 247 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 MALP21145 153 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 MUSTN1Q8IVN3 82 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 SPACA4Q8TDM5 124 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
CDC42BPB-203ENST00000558867 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
CDC42BPB-203ENST00000558867 PLAC8Q9NZF1 115 aa10.12□□□□□ -0.79
CDC42BPB-203ENST00000558867 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
CDC42BPB-203ENST00000558867 A4D1N5 150 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 CFC1BP0CG36 223 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 CFC1P0CG37 223 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 COX17Q14061 63 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
CDC42BPB-203ENST00000558867 F8WDY8 70 aa10.09□□□□□ -0.79
CDC42BPB-203ENST00000558867 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
CDC42BPB-203ENST00000558867 K7ERJ3 54 aa10.08□□□□□ -0.8
CDC42BPB-203ENST00000558867 CKS1BP61024 79 aa10.08□□□□□ -0.8
CDC42BPB-203ENST00000558867 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPB-203ENST00000558867 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
CDC42BPB-203ENST00000558867 PRO1854Q9UHT4 67 aa10.07□□□□□ -0.8
CDC42BPB-203ENST00000558867 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
CDC42BPB-203ENST00000558867 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
CDC42BPB-203ENST00000558867 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
CDC42BPB-203ENST00000558867 A0A1W2PPM0 123 aa10.06□□□□□ -0.8
CDC42BPB-203ENST00000558867 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
CDC42BPB-203ENST00000558867 RAB37Q96AX2 223 aa10.06□□□□□ -0.8
CDC42BPB-203ENST00000558867 H3BUT2 72 aa10.05□□□□□ -0.8
CDC42BPB-203ENST00000558867 SLPIP03973 132 aa10.05□□□□□ -0.8
CDC42BPB-203ENST00000558867 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
CDC42BPB-203ENST00000558867 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
CDC42BPB-203ENST00000558867 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
CDC42BPB-203ENST00000558867 SOSTDC1Q6X4U4 206 aa10.04□□□□□ -0.8
CDC42BPB-203ENST00000558867 MIR7-3HGQ8N6C7 128 aa10.04□□□□□ -0.8
CDC42BPB-203ENST00000558867 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
CDC42BPB-203ENST00000558867 IGKV2-24A0A0C4DH68 120 aa10.03□□□□□ -0.8
CDC42BPB-203ENST00000558867 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-203ENST00000558867 LINC00158P58513 81 aa10.03□□□□□ -0.8
CDC42BPB-203ENST00000558867 C2orf82Q6UX34 121 aa10.03□□□□□ -0.8
CDC42BPB-203ENST00000558867 DAND5Q8N907 189 aa10.03□□□□□ -0.8
CDC42BPB-203ENST00000558867 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
CDC42BPB-203ENST00000558867 TSPAN13O95857 204 aa10.02□□□□□ -0.81
CDC42BPB-203ENST00000558867 FABP2P12104 132 aa10.02□□□□□ -0.81
CDC42BPB-203ENST00000558867 UBE2V1Q13404 147 aa10.02□□□□□ -0.81
CDC42BPB-203ENST00000558867 VAMP3Q15836 100 aa10.02□□□□□ -0.81
CDC42BPB-203ENST00000558867 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
CDC42BPB-203ENST00000558867 KRTAP10-8P60410 259 aa10.01□□□□□ -0.81
CDC42BPB-203ENST00000558867 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
CDC42BPB-203ENST00000558867 GTF2H5Q6ZYL4 71 aa10□□□□□ -0.81
CDC42BPB-203ENST00000558867 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
CDC42BPB-203ENST00000558867 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
CDC42BPB-203ENST00000558867 K7EP34 96 aa9.99□□□□□ -0.81
CDC42BPB-203ENST00000558867 PFN2P35080 140 aa9.98□□□□□ -0.81
CDC42BPB-203ENST00000558867 NPC2P61916 151 aa9.98□□□□□ -0.81
CDC42BPB-203ENST00000558867 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
CDC42BPB-203ENST00000558867 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
CDC42BPB-203ENST00000558867 Q6ZRP5 223 aa9.98□□□□□ -0.81
CDC42BPB-203ENST00000558867 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
CDC42BPB-203ENST00000558867 NDUFC2O95298 119 aa9.97□□□□□ -0.81
CDC42BPB-203ENST00000558867 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
CDC42BPB-203ENST00000558867 SPCS1Q9Y6A9 102 aa9.97□□□□□ -0.81
CDC42BPB-203ENST00000558867 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.82
CDC42BPB-203ENST00000558867 C10orf25Q5T742 122 aa9.96□□□□□ -0.82
CDC42BPB-203ENST00000558867 NAA38Q9BRA0 125 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-203ENST00000558867 RNF151Q2KHN1 245 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms