RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 UBE2AP49459 152 aa5.55□□□□□ -1.52
SPG11-212ENST00000558790 VCX2Q9H322 139 aa5.55□□□□□ -1.52
SPG11-212ENST00000558790 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
SPG11-212ENST00000558790 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
SPG11-212ENST00000558790 HERVK_113P63121 156 aa5.54□□□□□ -1.52
SPG11-212ENST00000558790 ATP5L2Q7Z4Y8 100 aa5.54□□□□□ -1.52
SPG11-212ENST00000558790 Q8N8P6 123 aa5.54□□□□□ -1.52
SPG11-212ENST00000558790 CXCL5P42830 114 aa5.53□□□□□ -1.52
SPG11-212ENST00000558790 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
SPG11-212ENST00000558790 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 IGKV2D-26A0A0A0MRZ7 120 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 SCO1O75880 301 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 PRLHP81277 87 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 KIAA1644Q3SXP7 199 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 NKAPP1Q8N9T2 125 aa5.52□□□□□ -1.53
SPG11-212ENST00000558790 GEMIN7Q9H840 131 aaKnown RBP5.52□□□□□ -1.53
SPG11-212ENST00000558790 SEC11AP67812 179 aa5.51□□□□□ -1.53
SPG11-212ENST00000558790 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
SPG11-212ENST00000558790 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
SPG11-212ENST00000558790 COX7B2Q8TF08 81 aa5.5□□□□□ -1.53
SPG11-212ENST00000558790 TIMM17AQ99595 171 aa5.5□□□□□ -1.53
SPG11-212ENST00000558790 K7EMI3 77 aa5.49□□□□□ -1.53
SPG11-212ENST00000558790 RAB5BP61020 215 aa5.49□□□□□ -1.53
SPG11-212ENST00000558790 PEA15Q15121 130 aa5.49□□□□□ -1.53
SPG11-212ENST00000558790 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 SPINK8P0C7L1 97 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 CTAG1AP78358 180 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 PDZD11Q5EBL8 140 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 TOMM6Q96B49 74 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 LITAFQ99732 161 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
SPG11-212ENST00000558790 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
SPG11-212ENST00000558790 NXT2Q9NPJ8 142 aaKnown RBP5.47□□□□□ -1.53
SPG11-212ENST00000558790 TINCRA0A1B0GVN0 87 aa5.46□□□□□ -1.54
SPG11-212ENST00000558790 M0R378 163 aa5.46□□□□□ -1.54
SPG11-212ENST00000558790 ADCYAP1P18509 176 aa5.46□□□□□ -1.54
SPG11-212ENST00000558790 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
SPG11-212ENST00000558790 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
SPG11-212ENST00000558790 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.54
SPG11-212ENST00000558790 MT3P25713 68 aa5.45□□□□□ -1.54
SPG11-212ENST00000558790 ASB16-AS1Q495Z4 193 aa5.45□□□□□ -1.54
SPG11-212ENST00000558790 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
SPG11-212ENST00000558790 ERASQ7Z444 233 aa5.45□□□□□ -1.54
SPG11-212ENST00000558790 Q8NDZ9 215 aa5.45□□□□□ -1.54
SPG11-212ENST00000558790 SCGB3A1Q96QR1 104 aa5.45□□□□□ -1.54
SPG11-212ENST00000558790 ATP5LO75964 103 aa5.44□□□□□ -1.54
SPG11-212ENST00000558790 PFN2P35080 140 aa5.44□□□□□ -1.54
SPG11-212ENST00000558790 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
SPG11-212ENST00000558790 CBLN2Q8IUK8 224 aa5.44□□□□□ -1.54
SPG11-212ENST00000558790 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 G0S2P27469 103 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 SPRR4Q96PI1 79 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
SPG11-212ENST00000558790 CST9LQ9H4G1 147 aa5.42□□□□□ -1.54
SPG11-212ENST00000558790 ERG28Q9UKR5 140 aa5.42□□□□□ -1.54
SPG11-212ENST00000558790 MT-ND4LP03901 98 aa5.41□□□□□ -1.54
SPG11-212ENST00000558790 RAB14P61106 215 aa5.41□□□□□ -1.54
SPG11-212ENST00000558790 DAND5Q8N907 189 aa5.41□□□□□ -1.54
SPG11-212ENST00000558790 Q8NBF4 154 aa5.41□□□□□ -1.54
SPG11-212ENST00000558790 GNB1LQ9BYB4 327 aa5.41□□□□□ -1.54
SPG11-212ENST00000558790 H3BRM9 83 aa5.4□□□□□ -1.54
SPG11-212ENST00000558790 PMVKQ15126 192 aa5.4□□□□□ -1.54
SPG11-212ENST00000558790 LINC01546A6NGU7 62 aa5.39□□□□□ -1.55
SPG11-212ENST00000558790 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
SPG11-212ENST00000558790 ZNF625Q96I27 306 aaPredicted RBP5.39□□□□□ -1.55
SPG11-212ENST00000558790 ZNF22P17026 224 aaPredicted RBP5.38□□□□□ -1.55
SPG11-212ENST00000558790 COX17Q14061 63 aa5.38□□□□□ -1.55
SPG11-212ENST00000558790 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
SPG11-212ENST00000558790 ZNF706Q9Y5V0 76 aaPredicted RBP5.38□□□□□ -1.55
SPG11-212ENST00000558790 LINC01549A6NIU2 74 aa5.37□□□□□ -1.55
SPG11-212ENST00000558790 USH2AO75445 5202 aa5.36□□□□□ -1.55
SPG11-212ENST00000558790 A0A1B0GVG6 124 aa5.36□□□□□ -1.55
SPG11-212ENST00000558790 SPINK1P00995 79 aa5.36□□□□□ -1.55
SPG11-212ENST00000558790 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
SPG11-212ENST00000558790 Q8N377 158 aa5.35□□□□□ -1.55
SPG11-212ENST00000558790 A0A096LNJ9 63 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 NDUFA6P56556 154 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 MOBPQ13875 183 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 FA2HQ7L5A8 372 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 SMCO4Q9NRQ5 59 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.55
SPG11-212ENST00000558790 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 C11orf86A6NJI1 115 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 NCR3O14931 201 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 SPRR1AP35321 89 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 FAM19A2Q8N3H0 131 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 SMCR5Q8TEV8 140 aa5.33□□□□□ -1.56
SPG11-212ENST00000558790 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
SPG11-212ENST00000558790 TRAV9-1A0A075B6T8 112 aa5.32□□□□□ -1.56
SPG11-212ENST00000558790 KRTAP4-16G5E9R7 235 aaPredicted RBP5.32□□□□□ -1.56
SPG11-212ENST00000558790 LINC00158P58513 81 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms