RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
RTF1-205ENST00000558298 IGHV4-28A0A0C4DH34 117 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 NUPR2A6NF83 97 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 PRB4P10163 310 aaPredicted RBP5.6□□□□□ -1.51
RTF1-205ENST00000558298 CXCL6P80162 114 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 SPINK13Q1W4C9 94 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 SND1-IT1Q9HBX3 110 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 LINC00846Q9NV44 126 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
RTF1-205ENST00000558298 MUC4Q99102 2169 aa5.59□□□□□ -1.51
RTF1-205ENST00000558298 LCE6AA0A183 80 aa5.59□□□□□ -1.51
RTF1-205ENST00000558298 SMIM1B2RUZ4 78 aa5.59□□□□□ -1.51
RTF1-205ENST00000558298 C1orf43Q9BWL3 253 aa5.59□□□□□ -1.51
RTF1-205ENST00000558298 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 PLAC8L1A1L4L8 177 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 LYRM9A8MSI8 78 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 RS1O15537 224 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 IGKV3-20P01619 116 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 FHL2Q14192 279 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 LINC00612Q8N6U2 182 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 C11orf45Q8TAV5 145 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 C16orf74Q96GX8 76 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 C14orf132Q9NPU4 83 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
RTF1-205ENST00000558298 BIRC6Q9NR09 4857 aa5.57□□□□□ -1.52
RTF1-205ENST00000558298 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
RTF1-205ENST00000558298 RPL36AP83881 106 aaKnown RBP5.57□□□□□ -1.52
RTF1-205ENST00000558298 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
RTF1-205ENST00000558298 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
RTF1-205ENST00000558298 RPL36ALQ969Q0 106 aaKnown RBP5.57□□□□□ -1.52
RTF1-205ENST00000558298 FAM104AQ969W3 186 aa5.57□□□□□ -1.52
RTF1-205ENST00000558298 H7BZZ5 65 aa5.56□□□□□ -1.52
RTF1-205ENST00000558298 SPART-AS1P0CW21 52 aa5.56□□□□□ -1.52
RTF1-205ENST00000558298 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
RTF1-205ENST00000558298 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 TRBV6-4A0A1B0GX49 114 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 UBE2L6O14933 153 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 LECT2O14960 151 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 C1orf195Q5TG92 126 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 C11orf72Q8NBR9 251 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 SMIM11BQ8TCY0 68 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 NACAE9PAV3 2078 aa5.55□□□□□ -1.52
RTF1-205ENST00000558298 IGHV3OR16-12A0A075B7B8 117 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 TRAV10A0A0B4J240 114 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 K7EQD1 137 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 OXTP01178 125 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 COX17Q14061 63 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 SOSTDC1Q6X4U4 206 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 Q9HAA7 133 aa5.54□□□□□ -1.52
RTF1-205ENST00000558298 VPS13DQ5THJ4 4388 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.53□□□□□ -1.52
RTF1-205ENST00000558298 IGKV2-29A2NJV5 120 aaPredicted RBP5.53□□□□□ -1.52
RTF1-205ENST00000558298 ZNF561-AS1K7EIQ3 104 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 SEC61GP60059 68 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
RTF1-205ENST00000558298 Q6ZTC4 211 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 LINC00336Q6ZUF6 198 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 LINC00337Q8N6G1 96 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 CDC42SE2Q9NRR3 84 aa5.53□□□□□ -1.52
RTF1-205ENST00000558298 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 TRAV23DV6A0A075B6W5 121 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 A0A087WVE0 104 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 A0A087WYN8 130 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 H3BNG1 76 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 DEFB4AO15263 64 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 LINC00158P58513 81 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
RTF1-205ENST00000558298 Q8N814 137 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
RTF1-205ENST00000558298 A0A1B0GW54 56 aa5.51□□□□□ -1.53
RTF1-205ENST00000558298 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
RTF1-205ENST00000558298 CYSTM1Q9H1C7 97 aa5.51□□□□□ -1.53
RTF1-205ENST00000558298 IGKV2-28A0A075B6P5 120 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 A0A087WZ39 114 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 DEFB131BA0A096LNP1 70 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 NCR3O14931 201 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 PAX4O43316 350 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 IGKV2D-28P01615 120 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 DAD1P61803 113 aa5.5□□□□□ -1.53
RTF1-205ENST00000558298 CCL18P55774 89 aa5.49□□□□□ -1.53
RTF1-205ENST00000558298 NOP10Q9NPE3 64 aaKnown RBP5.49□□□□□ -1.53
RTF1-205ENST00000558298 APLNQ9ULZ1 77 aa5.49□□□□□ -1.53
RTF1-205ENST00000558298 PRM2P04554 102 aa5.48□□□□□ -1.53
RTF1-205ENST00000558298 COX6A2Q02221 97 aa5.48□□□□□ -1.53
RTF1-205ENST00000558298 RNASE13Q5GAN3 156 aaKnown RBP5.48□□□□□ -1.53
RTF1-205ENST00000558298 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
RTF1-205ENST00000558298 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
RTF1-205ENST00000558298 C6orf223Q8N319 242 aa5.48□□□□□ -1.53
RTF1-205ENST00000558298 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
RTF1-205ENST00000558298 F8WEM9 126 aa5.47□□□□□ -1.53
RTF1-205ENST00000558298 LINC01547P58512 204 aaPredicted RBP5.47□□□□□ -1.53
RTF1-205ENST00000558298 Q6ZQT0 140 aa5.47□□□□□ -1.53
RTF1-205ENST00000558298 Q8IZM0 81 aa5.47□□□□□ -1.53
RTF1-205ENST00000558298 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
RTF1-205ENST00000558298 TRBV7-4A0A0J9YYF1 115 aa5.46□□□□□ -1.54
RTF1-205ENST00000558298 A0A0U1RRA0 63 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms