RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MRPL55Q7Z7F7 128 aaKnown RBP5.29□□□□□ -1.56
SNRPA1-206ENST00000558059 PRR26Q8N8Z3 221 aa5.29□□□□□ -1.56
SNRPA1-206ENST00000558059 CHCHD1Q96BP2 118 aaKnown RBP5.29□□□□□ -1.56
SNRPA1-206ENST00000558059 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
SNRPA1-206ENST00000558059 NUPR1O60356 82 aa5.28□□□□□ -1.56
SNRPA1-206ENST00000558059 ZNF861PO60384 105 aa5.28□□□□□ -1.56
SNRPA1-206ENST00000558059 SLC7A5P1Q8MH63 180 aa5.28□□□□□ -1.56
SNRPA1-206ENST00000558059 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
SNRPA1-206ENST00000558059 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
SNRPA1-206ENST00000558059 TRAV12-1A0A0B4J245 112 aa5.27□□□□□ -1.57
SNRPA1-206ENST00000558059 PFN2P35080 140 aa5.27□□□□□ -1.57
SNRPA1-206ENST00000558059 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
SNRPA1-206ENST00000558059 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
SNRPA1-206ENST00000558059 CHTOPQ9Y3Y2 248 aaKnown RBP5.27□□□□□ -1.57
SNRPA1-206ENST00000558059 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 RPL37AP8A6NKH3 93 aa5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 TRGC2P03986 189 aa5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 FAM19A2Q8N3H0 131 aa5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 ZNF625Q96I27 306 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 SND1-IT1Q9HBX3 110 aa5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 ERG28Q9UKR5 140 aa5.26□□□□□ -1.57
SNRPA1-206ENST00000558059 IGLV1-50A0A075B6I6 118 aa5.25□□□□□ -1.57
SNRPA1-206ENST00000558059 TMEM223A0PJW6 202 aa5.25□□□□□ -1.57
SNRPA1-206ENST00000558059 BCE1O60756 84 aa5.25□□□□□ -1.57
SNRPA1-206ENST00000558059 SCO1O75880 301 aa5.25□□□□□ -1.57
SNRPA1-206ENST00000558059 COX17Q14061 63 aa5.25□□□□□ -1.57
SNRPA1-206ENST00000558059 HSBP1O75506 76 aa5.24□□□□□ -1.57
SNRPA1-206ENST00000558059 VPREB1P12018 145 aa5.24□□□□□ -1.57
SNRPA1-206ENST00000558059 NKAPP1Q8N9T2 125 aa5.24□□□□□ -1.57
SNRPA1-206ENST00000558059 Q8NDZ9 215 aa5.24□□□□□ -1.57
SNRPA1-206ENST00000558059 COLCA2A8K830 154 aa5.23□□□□□ -1.57
SNRPA1-206ENST00000558059 RPL28P46779 137 aaKnown RBP5.23□□□□□ -1.57
SNRPA1-206ENST00000558059 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
SNRPA1-206ENST00000558059 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
SNRPA1-206ENST00000558059 LPAP08519 4548 aa5.22□□□□□ -1.57
SNRPA1-206ENST00000558059 SERF1AO75920 110 aa5.22□□□□□ -1.57
SNRPA1-206ENST00000558059 IGKV2-28A0A075B6P5 120 aa5.21□□□□□ -1.58
SNRPA1-206ENST00000558059 LEPROTL1O95214 131 aa5.21□□□□□ -1.58
SNRPA1-206ENST00000558059 IGKV2D-28P01615 120 aa5.21□□□□□ -1.58
SNRPA1-206ENST00000558059 RPL13AP40429 203 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-206ENST00000558059 LINC00158P58513 81 aa5.21□□□□□ -1.58
SNRPA1-206ENST00000558059 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-206ENST00000558059 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
SNRPA1-206ENST00000558059 A0A087X002 238 aa5.2□□□□□ -1.58
SNRPA1-206ENST00000558059 A0A0U1RRA0 63 aa5.2□□□□□ -1.58
SNRPA1-206ENST00000558059 H0Y8G0 127 aa5.2□□□□□ -1.58
SNRPA1-206ENST00000558059 SMIM13P0DJ93 91 aa5.2□□□□□ -1.58
SNRPA1-206ENST00000558059 TMEM238C9JI98 176 aa5.19□□□□□ -1.58
SNRPA1-206ENST00000558059 M0R378 163 aa5.19□□□□□ -1.58
SNRPA1-206ENST00000558059 FABP4P15090 132 aa5.19□□□□□ -1.58
SNRPA1-206ENST00000558059 UBE2AP49459 152 aa5.19□□□□□ -1.58
SNRPA1-206ENST00000558059 TMEM126AQ9H061 195 aa5.19□□□□□ -1.58
SNRPA1-206ENST00000558059 ANAPC11Q9NYG5 84 aa5.19□□□□□ -1.58
SNRPA1-206ENST00000558059 TSPEAR-AS2P59090 65 aa5.18□□□□□ -1.58
SNRPA1-206ENST00000558059 HERV-K104P63124 156 aa5.18□□□□□ -1.58
SNRPA1-206ENST00000558059 NDUFA12Q9UI09 145 aa5.18□□□□□ -1.58
SNRPA1-206ENST00000558059 HSPB8Q9UJY1 196 aa5.18□□□□□ -1.58
SNRPA1-206ENST00000558059 MYMXA0A1B0GTQ4 84 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 LEPROTO15243 131 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 CRYGAP11844 174 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 PRLHP81277 87 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 FAM19A1Q7Z5A9 133 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 MIR7-3HGQ8N6C7 128 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 PMCHL2Q9BQD1 86 aa5.17□□□□□ -1.58
SNRPA1-206ENST00000558059 ATP6V1G1O75348 118 aa5.16□□□□□ -1.58
SNRPA1-206ENST00000558059 DPM2O94777 84 aa5.16□□□□□ -1.58
SNRPA1-206ENST00000558059 PLNP26678 52 aa5.16□□□□□ -1.58
SNRPA1-206ENST00000558059 KRTAP13-2Q52LG2 175 aa5.16□□□□□ -1.58
SNRPA1-206ENST00000558059 BOD1L2Q8IYS8 172 aa5.16□□□□□ -1.58
SNRPA1-206ENST00000558059 PLEKHB2Q96CS7 222 aa5.16□□□□□ -1.58
SNRPA1-206ENST00000558059 LINC00587B1AMM8 73 aa5.15□□□□□ -1.59
SNRPA1-206ENST00000558059 J3QQQ9 107 aa5.15□□□□□ -1.59
SNRPA1-206ENST00000558059 IGKCP01834 107 aa5.15□□□□□ -1.59
SNRPA1-206ENST00000558059 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
SNRPA1-206ENST00000558059 TYMSOSQ8TAI1 123 aa5.15□□□□□ -1.59
SNRPA1-206ENST00000558059 LOC107984156A0A0G2JMH3 177 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 NCR3O14931 201 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BKO60814 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 TSPAN13O95857 204 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BJP06899 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BOP23527 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BBP33778 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BDP58876 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BCP62807 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST2H2BEQ16778 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 ARL17AQ8IVW1 177 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BHQ93079 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BNQ99877 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 HIST1H2BMQ99879 126 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 MAP1LC3CQ9BXW4 147 aa5.14□□□□□ -1.59
SNRPA1-206ENST00000558059 IGKV2D-26A0A0A0MRZ7 120 aa5.13□□□□□ -1.59
SNRPA1-206ENST00000558059 PRYO14603 147 aa5.13□□□□□ -1.59
SNRPA1-206ENST00000558059 SPRR1AP35321 89 aa5.13□□□□□ -1.59
SNRPA1-206ENST00000558059 HERVK_113P61574 105 aa5.13□□□□□ -1.59
SNRPA1-206ENST00000558059 DAND5Q8N907 189 aa5.13□□□□□ -1.59
SNRPA1-206ENST00000558059 KCNQ1DNQ9H478 68 aa5.13□□□□□ -1.59
SNRPA1-206ENST00000558059 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
SNRPA1-206ENST00000558059 KRTAP4-16G5E9R7 235 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms