RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
RIPK3-206ENST00000557624 Q8N814 137 aa9.28□□□□□ -0.92
RIPK3-206ENST00000557624 PRO1854Q9UHT4 67 aa9.28□□□□□ -0.92
RIPK3-206ENST00000557624 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.92
RIPK3-206ENST00000557624 SPAG11BQ08648 103 aa9.27□□□□□ -0.92
RIPK3-206ENST00000557624 C5orf47Q569G3 176 aa9.27□□□□□ -0.92
RIPK3-206ENST00000557624 LINC01561Q8N1V8 128 aa9.27□□□□□ -0.92
RIPK3-206ENST00000557624 TOMM7Q9P0U1 55 aa9.27□□□□□ -0.92
RIPK3-206ENST00000557624 DNAH17Q9UFH2 4485 aa9.27□□□□□ -0.93
RIPK3-206ENST00000557624 A0A0B4J2C4 111 aa9.27□□□□□ -0.93
RIPK3-206ENST00000557624 ZNF561-AS1K7EIQ3 104 aa9.27□□□□□ -0.93
RIPK3-206ENST00000557624 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
RIPK3-206ENST00000557624 TRBV7-7A0A0K0K1E9 115 aa9.26□□□□□ -0.93
RIPK3-206ENST00000557624 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
RIPK3-206ENST00000557624 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
RIPK3-206ENST00000557624 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
RIPK3-206ENST00000557624 PRSS2P07478 247 aa9.25□□□□□ -0.93
RIPK3-206ENST00000557624 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
RIPK3-206ENST00000557624 TRBV10-2A0A0K0K1G8 114 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 A0A1B0GX51 115 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 H3BT86 120 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 KRTAP10-2P60368 255 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 COX7B2Q8TF08 81 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 C9JAW5 83 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 ACYP1P07311 99 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 CFC1P0CG37 223 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 C6orf226Q5I0X4 101 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 Q8IZM0 81 aa9.23□□□□□ -0.93
RIPK3-206ENST00000557624 FAT2Q9NYQ8 4349 aa9.22□□□□□ -0.93
RIPK3-206ENST00000557624 SLPIP03973 132 aa9.22□□□□□ -0.93
RIPK3-206ENST00000557624 KIAA0087Q14695 138 aa9.22□□□□□ -0.93
RIPK3-206ENST00000557624 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
RIPK3-206ENST00000557624 NTN5Q8WTR8 489 aaPredicted RBP9.22□□□□□ -0.93
RIPK3-206ENST00000557624 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
RIPK3-206ENST00000557624 IGLV5-52A0A0A0MRZ9 124 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 A0A1B0GVY2 172 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 LINC01620Q4KN68 170 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 C2orf48Q96LS8 159 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 TRBV30A0A0K0K1B3 111 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 NDUFA1O15239 70 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
RIPK3-206ENST00000557624 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
RIPK3-206ENST00000557624 Q6ZRU5 148 aa9.2□□□□□ -0.94
RIPK3-206ENST00000557624 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
RIPK3-206ENST00000557624 UNQ6190/PRO20217Q6UXQ8 127 aa9.19□□□□□ -0.94
RIPK3-206ENST00000557624 J3KT08 172 aa9.18□□□□□ -0.94
RIPK3-206ENST00000557624 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
RIPK3-206ENST00000557624 UQCRQO14949 82 aa9.17□□□□□ -0.94
RIPK3-206ENST00000557624 LEPROTO15243 131 aa9.17□□□□□ -0.94
RIPK3-206ENST00000557624 CXCL5P42830 114 aa9.17□□□□□ -0.94
RIPK3-206ENST00000557624 TSPEAR-AS2P59090 65 aa9.17□□□□□ -0.94
RIPK3-206ENST00000557624 KRTAP17-1Q9BYP8 105 aa9.17□□□□□ -0.94
RIPK3-206ENST00000557624 F8WDY8 70 aa9.16□□□□□ -0.94
RIPK3-206ENST00000557624 J3QQQ9 107 aa9.16□□□□□ -0.94
RIPK3-206ENST00000557624 LGALS3P17931 250 aaKnown RBP9.16□□□□□ -0.94
RIPK3-206ENST00000557624 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
RIPK3-206ENST00000557624 COX6CP09669 75 aa9.15□□□□□ -0.94
RIPK3-206ENST00000557624 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
RIPK3-206ENST00000557624 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
RIPK3-206ENST00000557624 OR13C6PQ8NH95 151 aa9.15□□□□□ -0.94
RIPK3-206ENST00000557624 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
RIPK3-206ENST00000557624 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
RIPK3-206ENST00000557624 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
RIPK3-206ENST00000557624 C16orf90A8MZG2 172 aa9.13□□□□□ -0.95
RIPK3-206ENST00000557624 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
RIPK3-206ENST00000557624 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
RIPK3-206ENST00000557624 PKD1P98161 4303 aa9.12□□□□□ -0.95
RIPK3-206ENST00000557624 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
RIPK3-206ENST00000557624 SFTA2Q6UW10 78 aa9.12□□□□□ -0.95
RIPK3-206ENST00000557624 A4D1N5 150 aa9.11□□□□□ -0.95
RIPK3-206ENST00000557624 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
RIPK3-206ENST00000557624 LINC00643Q86TS7 51 aa9.1□□□□□ -0.95
RIPK3-206ENST00000557624 PKHD1P08F94 4074 aa9.1□□□□□ -0.95
RIPK3-206ENST00000557624 TEX49A0A1B0GTD5 131 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 PFN2P35080 140 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 Q1RN00 199 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 HECTD4Q9Y4D8 3996 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
RIPK3-206ENST00000557624 IGKV2-24A0A0C4DH68 120 aa9.08□□□□□ -0.96
RIPK3-206ENST00000557624 A0A0U1RRA0 63 aa9.08□□□□□ -0.96
RIPK3-206ENST00000557624 CRYGAP11844 174 aa9.08□□□□□ -0.96
RIPK3-206ENST00000557624 A0A096LNI7 61 aa9.07□□□□□ -0.96
RIPK3-206ENST00000557624 NDUFC2-KCTD14E9PQ53 114 aa9.07□□□□□ -0.96
RIPK3-206ENST00000557624 CHTF8P0CG12 524 aa9.07□□□□□ -0.96
RIPK3-206ENST00000557624 Q6ZRP5 223 aa9.07□□□□□ -0.96
RIPK3-206ENST00000557624 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
RIPK3-206ENST00000557624 FAM236AA0A1B0GUQ0 79 aa9.06□□□□□ -0.96
RIPK3-206ENST00000557624 FAM236BA0A1B0GV22 79 aa9.06□□□□□ -0.96
RIPK3-206ENST00000557624 LST1O00453 97 aa9.06□□□□□ -0.96
RIPK3-206ENST00000557624 LINC00158P58513 81 aa9.06□□□□□ -0.96
RIPK3-206ENST00000557624 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
RIPK3-206ENST00000557624 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
RIPK3-206ENST00000557624 TRIAP1O43715 76 aa9.05□□□□□ -0.96
RIPK3-206ENST00000557624 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
RIPK3-206ENST00000557624 COX7CP15954 63 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms