RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 A6NDN8 102 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 HINT1P49773 126 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-227ENST00000557599 CNBPP62633 177 aaKnown RBP6.88□□□□□ -1.31
PRKCH-227ENST00000557599 BATFQ16520 125 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 Q8N1X5 172 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 Q8N814 137 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 NPC2P61916 151 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
PRKCH-227ENST00000557599 WFDC2Q14508 124 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-227ENST00000557599 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 DAND5Q8N907 189 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 LINC00308Q8TCZ7 52 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 LITAFQ99732 161 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 PPDPFQ9H3Y8 114 aa6.87□□□□□ -1.31
PRKCH-227ENST00000557599 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
PRKCH-227ENST00000557599 TLX1NBP0CAT3 122 aa6.85□□□□□ -1.31
PRKCH-227ENST00000557599 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
PRKCH-227ENST00000557599 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
PRKCH-227ENST00000557599 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
PRKCH-227ENST00000557599 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
PRKCH-227ENST00000557599 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
PRKCH-227ENST00000557599 IGLV5-52A0A0A0MRZ9 124 aa6.83□□□□□ -1.32
PRKCH-227ENST00000557599 A4D1N5 150 aa6.83□□□□□ -1.32
PRKCH-227ENST00000557599 FXYD2P54710 66 aa6.83□□□□□ -1.32
PRKCH-227ENST00000557599 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
PRKCH-227ENST00000557599 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
PRKCH-227ENST00000557599 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
PRKCH-227ENST00000557599 LINC00474Q9P2X8 69 aa6.83□□□□□ -1.32
PRKCH-227ENST00000557599 SLPIP03973 132 aa6.82□□□□□ -1.32
PRKCH-227ENST00000557599 COL5A1-AS1Q5SY13 56 aa6.82□□□□□ -1.32
PRKCH-227ENST00000557599 TRAV13-2A0A0B4J235 113 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 NDUFC2O95298 119 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 Q6ZRP5 223 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 NKAPP1Q8N9T2 125 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 PGPEP1Q9NXJ5 209 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 CBY1Q9Y3M2 126 aa6.81□□□□□ -1.32
PRKCH-227ENST00000557599 A0A0B4J2C4 111 aa6.8□□□□□ -1.32
PRKCH-227ENST00000557599 LBHQ53QV2 105 aaPredicted RBP6.8□□□□□ -1.32
PRKCH-227ENST00000557599 SNHG12Q9BXW3 62 aa6.8□□□□□ -1.32
PRKCH-227ENST00000557599 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
PRKCH-227ENST00000557599 XGP55808 180 aa6.79□□□□□ -1.32
PRKCH-227ENST00000557599 Q1RN00 199 aa6.79□□□□□ -1.32
PRKCH-227ENST00000557599 SOSTDC1Q6X4U4 206 aa6.79□□□□□ -1.32
PRKCH-227ENST00000557599 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
PRKCH-227ENST00000557599 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
PRKCH-227ENST00000557599 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
PRKCH-227ENST00000557599 S100A7L2Q5SY68 101 aa6.78□□□□□ -1.32
PRKCH-227ENST00000557599 PRO1854Q9UHT4 67 aa6.78□□□□□ -1.32
PRKCH-227ENST00000557599 TRBV10-2A0A0K0K1G8 114 aa6.77□□□□□ -1.33
PRKCH-227ENST00000557599 A0A1B0GWB2 263 aa6.77□□□□□ -1.33
PRKCH-227ENST00000557599 CFC1BP0CG36 223 aa6.77□□□□□ -1.33
PRKCH-227ENST00000557599 CFC1P0CG37 223 aa6.77□□□□□ -1.33
PRKCH-227ENST00000557599 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
PRKCH-227ENST00000557599 A0A096LNI7 61 aa6.76□□□□□ -1.33
PRKCH-227ENST00000557599 M0R378 163 aa6.76□□□□□ -1.33
PRKCH-227ENST00000557599 NCR3O14931 201 aa6.76□□□□□ -1.33
PRKCH-227ENST00000557599 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
PRKCH-227ENST00000557599 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
PRKCH-227ENST00000557599 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
PRKCH-227ENST00000557599 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
PRKCH-227ENST00000557599 H7C2G1 150 aa6.75□□□□□ -1.33
PRKCH-227ENST00000557599 K7ERJ3 54 aa6.75□□□□□ -1.33
PRKCH-227ENST00000557599 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-227ENST00000557599 C9orf129Q5T035 196 aaKnown RBP6.75□□□□□ -1.33
PRKCH-227ENST00000557599 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-227ENST00000557599 SDIM1Q6ZPB5 146 aa6.75□□□□□ -1.33
PRKCH-227ENST00000557599 COX6CP09669 75 aa6.74□□□□□ -1.33
PRKCH-227ENST00000557599 VPREB1P12018 145 aa6.74□□□□□ -1.33
PRKCH-227ENST00000557599 PSMB2P49721 201 aa6.74□□□□□ -1.33
PRKCH-227ENST00000557599 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
PRKCH-227ENST00000557599 IGLV5-37A0A075B6J1 123 aa6.73□□□□□ -1.33
PRKCH-227ENST00000557599 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
PRKCH-227ENST00000557599 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
PRKCH-227ENST00000557599 IGKV2-28A0A075B6P5 120 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 M0QXV9 152 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 IGKV2D-28P01615 120 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
PRKCH-227ENST00000557599 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
PRKCH-227ENST00000557599 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
PRKCH-227ENST00000557599 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
PRKCH-227ENST00000557599 CHTF8P0CG12 524 aa6.71□□□□□ -1.34
PRKCH-227ENST00000557599 SCGB1C2P0DMR2 95 aa6.71□□□□□ -1.34
PRKCH-227ENST00000557599 VAMP3Q15836 100 aa6.71□□□□□ -1.34
PRKCH-227ENST00000557599 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
PRKCH-227ENST00000557599 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
PRKCH-227ENST00000557599 SNCGO76070 127 aa6.7□□□□□ -1.34
PRKCH-227ENST00000557599 TSPAN13O95857 204 aa6.7□□□□□ -1.34
PRKCH-227ENST00000557599 FABP2P12104 132 aa6.7□□□□□ -1.34
PRKCH-227ENST00000557599 UBE2BP63146 152 aa6.7□□□□□ -1.34
PRKCH-227ENST00000557599 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms