RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 ASXL3Q9C0F0 2248 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 TRBV25-1A0A075B6N4 114 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 TRGV4A0A0C4DH28 118 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 TMEM14DPA8MWL7 114 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 IGKV1-17P01599 117 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 IL9P15248 144 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 CCL3L1P16619 93 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 SNRPFP62306 86 aaKnown RBP1.65□□□□□ -2.15
FOXN3-217ENST00000557572 LINC00304Q8N9R0 145 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 TVP23CQ96ET8 276 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 TTTY12Q9BZ98 90 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 DYNLRB1Q9NP97 96 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 PCDH15Q96QU1 1955 aa1.65□□□□□ -2.15
FOXN3-217ENST00000557572 RGPD8O14715 1765 aaPredicted RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 RGPD5Q99666 1765 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 TGP01266 2768 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 SPENQ96T58 3664 aaKnown RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 FREM1Q5H8C1 2179 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 A0A087WTM6 91 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 F8WEM9 126 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 BCE1O60756 84 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 COX6CP09669 75 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 ELOF1P60002 83 aaKnown RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 RPL37AP61513 92 aaKnown RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 SSBP1Q04837 148 aaKnown RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 IGFL1Q6UW32 110 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 Q6ZRN7 208 aaPredicted RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 KLK9Q9UKQ9 250 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 LENEPQ9Y5L5 61 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 ANKHD1Q8IWZ3 2542 aaKnown RBP1.64□□□□□ -2.15
FOXN3-217ENST00000557572 TECTAO75443 2155 aa1.64□□□□□ -2.15
FOXN3-217ENST00000557572 PTPRQQ9UMZ3 2332 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 COL6A5A8TX70 2615 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 IGKV2-24A0A0C4DH68 120 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 KANTRA0A1W2PQU2 76 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 FAM223BA6NKX1 122 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 HIGD1CA8MV81 97 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 PPP1R17O96001 155 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 DNAL4O96015 105 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 LINC00643Q86TS7 51 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 S100ZQ8WXG8 99 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 TXNDC17Q9BRA2 123 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 PROK2Q9HC23 129 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 TMEM14BQ9NUH8 114 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 PSENENQ9NZ42 101 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 SHROOM3Q8TF72 1996 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 CRYBG1Q9Y4K1 1723 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 PI4KAP42356 2102 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 GBF1Q92538 1859 aa1.63□□□□□ -2.15
FOXN3-217ENST00000557572 TLN2Q9Y4G6 2542 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 AFDNP55196 1824 aaKnown RBP1.62□□□□□ -2.15
FOXN3-217ENST00000557572 TNRC6BQ9UPQ9 1833 aaKnown RBP1.62□□□□□ -2.15
FOXN3-217ENST00000557572 IGKV2-29A2NJV5 120 aaPredicted RBP1.62□□□□□ -2.15
FOXN3-217ENST00000557572 PRB1P04280 392 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 SPAG11BQ08648 103 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 FXYD3Q14802 87 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 SPAG11AQ6PDA7 123 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 MYO7BQ6PIF6 2116 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 COA5Q86WW8 74 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 C5orf56Q8N8D9 126 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 TET1Q8NFU7 2136 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 COX7B2Q8TF08 81 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 DOPEY2Q9Y3R5 2298 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 ALPK2Q86TB3 2170 aa1.62□□□□□ -2.15
FOXN3-217ENST00000557572 SIPA1L3O60292 1781 aaPredicted RBP1.62□□□□□ -2.15
FOXN3-217ENST00000557572 MDC1Q14676 2089 aaKnown RBP1.62□□□□□ -2.15
FOXN3-217ENST00000557572 HIVEP1P15822 2718 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 TOGARAM1Q9Y4F4 1720 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 VWFP04275 2813 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 RTTNQ86VV8 2226 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 IGLV3-32A0A0A0MS00 114 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 IQCF6A8MYZ5 107 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 HMGN2P05204 90 aaKnown RBP1.61□□□□□ -2.15
FOXN3-217ENST00000557572 CCL18P55774 89 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 PSMG4Q5JS54 123 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 TMEM170BQ5T4T1 132 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 HCP5Q6MZN7 132 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 ARL2-SNX15V9GYD0 113 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 ZNF236Q9UL36 1845 aa1.61□□□□□ -2.15
FOXN3-217ENST00000557572 MAP1AP78559 2803 aaPredicted RBP1.61□□□□□ -2.15
FOXN3-217ENST00000557572 TACC2O95359 2948 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 A0A0G2JMZ2 1700 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 ZNF815PA8K554 130 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 INE1O15225 51 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 HMGN3Q15651 99 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 LINC00322Q6ZN03 302 aaPredicted RBP1.6□□□□□ -2.15
FOXN3-217ENST00000557572 ZNF625Q96I27 306 aaPredicted RBP1.6□□□□□ -2.15
FOXN3-217ENST00000557572 V9GYH0 126 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 SPAG17Q6Q759 2223 aa1.6□□□□□ -2.15
FOXN3-217ENST00000557572 PRRC2CQ9Y520 2896 aaKnown RBP1.6□□□□□ -2.15
FOXN3-217ENST00000557572 BCORQ6W2J9 1755 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 F8P00451 2351 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 APCP25054 2843 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 ACYP1P07311 99 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 SMIM11AP58511 58 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 XAF1Q6GPH4 301 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 ZNF563Q8TA94 476 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms