RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 EPM2AB3EWF7 344 aa3.28□□□□□ -1.88
SYNE2-223ENST00000557005 VCANP13611 3396 aa3.28□□□□□ -1.88
SYNE2-223ENST00000557005 WIPF1O43516 503 aa3.28□□□□□ -1.88
SYNE2-223ENST00000557005 IGFL1Q6UW32 110 aa3.28□□□□□ -1.88
SYNE2-223ENST00000557005 C4orf48Q5BLP8 95 aa3.28□□□□□ -1.88
SYNE2-223ENST00000557005 C19orf73Q9NVV2 129 aa3.28□□□□□ -1.88
SYNE2-223ENST00000557005 SPINK1P00995 79 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 CHD9Q3L8U1 2897 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 KCNQ1DNQ9H478 68 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 KRTAP10-11P60412 298 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 LINC00588Q9Y4M8 146 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 PKDREJQ9NTG1 2253 aa3.27□□□□□ -1.89
SYNE2-223ENST00000557005 TRIOBPQ9H2D6 2365 aa3.26□□□□□ -1.89
SYNE2-223ENST00000557005 SPENQ96T58 3664 aaKnown RBP3.26□□□□□ -1.89
SYNE2-223ENST00000557005 C7orf65Q6ZTY9 151 aa3.26□□□□□ -1.89
SYNE2-223ENST00000557005 MOBPQ13875 183 aa3.26□□□□□ -1.89
SYNE2-223ENST00000557005 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
SYNE2-223ENST00000557005 A8MWP4 228 aa3.25□□□□□ -1.89
SYNE2-223ENST00000557005 FP248Q71RG6 208 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-223ENST00000557005 AHCTF1Q8WYP5 2266 aa3.25□□□□□ -1.89
SYNE2-223ENST00000557005 IGLV5-52A0A0A0MRZ9 124 aa3.25□□□□□ -1.89
SYNE2-223ENST00000557005 CASC10Q5T4H9 136 aa3.25□□□□□ -1.89
SYNE2-223ENST00000557005 PRR34Q9NV39 138 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 A0A1B0GU69 56 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 FREM2Q5SZK8 3169 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 A0A1B0GW54 56 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 H3BNG1 76 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 C16orf90A8MZG2 172 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 OCR1Q9BZK8 76 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 ABCA4P78363 2273 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 A0A1W2PNM2 257 aa3.24□□□□□ -1.89
SYNE2-223ENST00000557005 SPEGQ15772 3267 aa3.23□□□□□ -1.89
SYNE2-223ENST00000557005 H3BPC8 53 aa3.23□□□□□ -1.89
SYNE2-223ENST00000557005 Q1T7F1 81 aa3.23□□□□□ -1.89
SYNE2-223ENST00000557005 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
SYNE2-223ENST00000557005 ZFHX3Q15911 3703 aa3.23□□□□□ -1.89
SYNE2-223ENST00000557005 REV3LO60673 3130 aa3.23□□□□□ -1.89
SYNE2-223ENST00000557005 LY6G6CO95867 125 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 ACYP2P14621 99 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 KRTAP1-3Q8IUG1 177 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 WDR87Q6ZQQ6 2873 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 IGKV2D-30A0A075B6S6 120 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 IGKV2-30P06310 120 aa3.22□□□□□ -1.89
SYNE2-223ENST00000557005 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
SYNE2-223ENST00000557005 POLEQ07864 2286 aa3.21□□□□□ -1.9
SYNE2-223ENST00000557005 DNAH10OSP0CZ25 163 aa3.21□□□□□ -1.9
SYNE2-223ENST00000557005 DSCR10P59022 87 aa3.21□□□□□ -1.9
SYNE2-223ENST00000557005 CEP250Q9BV73 2442 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 NUPR2A6NF83 97 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 PLA2G2DQ9UNK4 145 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 ZDBF2Q9HCK1 2354 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 MDFIQ99750 246 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 DCHS1Q96JQ0 3298 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 EYSQ5T1H1 3165 aa3.2□□□□□ -1.9
SYNE2-223ENST00000557005 CD164Q04900 197 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 CEP290O15078 2479 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 COL6A3P12111 3177 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 RTL8CO15255 209 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 TLX1NBP0CAT3 122 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
SYNE2-223ENST00000557005 LOC101927531A0A1B0GV80 90 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 MRPL34Q9BQ48 92 aaKnown RBP3.18□□□□□ -1.9
SYNE2-223ENST00000557005 WNK2Q9Y3S1 2297 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 LAMA2P24043 3122 aaKnown RBP3.18□□□□□ -1.9
SYNE2-223ENST00000557005 K7ERS5 55 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 LINC00313P59037 77 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 CNBPP62633 177 aaKnown RBP3.18□□□□□ -1.9
SYNE2-223ENST00000557005 PTPRZ1P23471 2315 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-223ENST00000557005 CELSR3Q9NYQ7 3312 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 TRANK1O15050 2925 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 ZNF318Q5VUA4 2279 aa3.18□□□□□ -1.9
SYNE2-223ENST00000557005 IGLV5-48A0A075B6I7 105 aa3.17□□□□□ -1.9
SYNE2-223ENST00000557005 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
SYNE2-223ENST00000557005 FAM186AA6NE01 2351 aa3.17□□□□□ -1.9
SYNE2-223ENST00000557005 MED13LQ71F56 2210 aa3.17□□□□□ -1.9
SYNE2-223ENST00000557005 SMG1Q96Q15 3661 aaKnown RBP3.17□□□□□ -1.9
SYNE2-223ENST00000557005 SPACA4Q8TDM5 124 aa3.17□□□□□ -1.9
SYNE2-223ENST00000557005 CDC42SE1Q9NRR8 79 aa3.17□□□□□ -1.9
SYNE2-223ENST00000557005 ABCA1O95477 2261 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 KRTAP1-1Q07627 177 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 ATP11AUNQ6ZP68 121 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 GPR179Q6PRD1 2367 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 IGLV5-37A0A075B6J1 123 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 Q5VV11 94 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 LAMA1P25391 3075 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 KRTAP24-1Q3LI83 254 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 C1orf134Q5TEV5 83 aa3.16□□□□□ -1.9
SYNE2-223ENST00000557005 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.9
SYNE2-223ENST00000557005 Q96NJ1 140 aa3.15□□□□□ -1.91
SYNE2-223ENST00000557005 NBDYA0A0U1RRE5 68 aa3.15□□□□□ -1.91
SYNE2-223ENST00000557005 Q75L30 129 aa3.15□□□□□ -1.91
SYNE2-223ENST00000557005 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms