RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 HIST1H4GQ99525 98 aa8.16□□□□□ -1.1
PSEN1-219ENST00000556951 SPANXB1Q9NS25 103 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-219ENST00000556951 CXCL5P42830 114 aa8.15□□□□□ -1.1
PSEN1-219ENST00000556951 CKS1BP61024 79 aa8.15□□□□□ -1.1
PSEN1-219ENST00000556951 RPL37AP61513 92 aaKnown RBP8.15□□□□□ -1.1
PSEN1-219ENST00000556951 LPAP08519 4548 aa8.14□□□□□ -1.11
PSEN1-219ENST00000556951 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
PSEN1-219ENST00000556951 HINT1P49773 126 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-219ENST00000556951 SPAG11BQ08648 103 aa8.14□□□□□ -1.11
PSEN1-219ENST00000556951 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
PSEN1-219ENST00000556951 BVES-AS1Q5T3Y7 98 aa8.13□□□□□ -1.11
PSEN1-219ENST00000556951 Q6ZVH6 145 aa8.13□□□□□ -1.11
PSEN1-219ENST00000556951 CEND1Q8N111 149 aa8.13□□□□□ -1.11
PSEN1-219ENST00000556951 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
PSEN1-219ENST00000556951 F8WDY8 70 aa8.12□□□□□ -1.11
PSEN1-219ENST00000556951 LITAFQ99732 161 aa8.12□□□□□ -1.11
PSEN1-219ENST00000556951 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
PSEN1-219ENST00000556951 SPANXCQ9NY87 97 aa8.12□□□□□ -1.11
PSEN1-219ENST00000556951 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 BATFQ16520 125 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 MEIG1Q5JSS6 88 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 ADAMTSL4-AS1Q5T5F5 129 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 C2orf82Q6UX34 121 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 C15orf56Q8N910 161 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 C2orf48Q96LS8 159 aa8.11□□□□□ -1.11
PSEN1-219ENST00000556951 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-219ENST00000556951 SMIM13P0DJ93 91 aa8.1□□□□□ -1.11
PSEN1-219ENST00000556951 IFITM1P13164 125 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-219ENST00000556951 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 Q6ZRU5 148 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 COPS9Q8WXC6 57 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 ERG28Q9UKR5 140 aa8.09□□□□□ -1.11
PSEN1-219ENST00000556951 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
PSEN1-219ENST00000556951 LINC00158P58513 81 aa8.08□□□□□ -1.12
PSEN1-219ENST00000556951 COX17Q14061 63 aa8.08□□□□□ -1.12
PSEN1-219ENST00000556951 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-219ENST00000556951 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
PSEN1-219ENST00000556951 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
PSEN1-219ENST00000556951 A6NDN8 102 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 PANO1I0J062 215 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 FXYD2P54710 66 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
PSEN1-219ENST00000556951 COL5A1-AS1Q5SY13 56 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 C10orf25Q5T742 122 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 CAMK2N2Q96S95 79 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 PPDPFQ9H3Y8 114 aa8.07□□□□□ -1.12
PSEN1-219ENST00000556951 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
PSEN1-219ENST00000556951 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
PSEN1-219ENST00000556951 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
PSEN1-219ENST00000556951 A6NJY4 79 aa8.06□□□□□ -1.12
PSEN1-219ENST00000556951 PFN2P35080 140 aa8.06□□□□□ -1.12
PSEN1-219ENST00000556951 LINC00308Q8TCZ7 52 aa8.06□□□□□ -1.12
PSEN1-219ENST00000556951 MIR7-3HGQ8N6C7 128 aa8.05□□□□□ -1.12
PSEN1-219ENST00000556951 DAND5Q8N907 189 aa8.05□□□□□ -1.12
PSEN1-219ENST00000556951 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-219ENST00000556951 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
PSEN1-219ENST00000556951 RNF151Q2KHN1 245 aa8.04□□□□□ -1.12
PSEN1-219ENST00000556951 C14orf177Q52M58 125 aa8.04□□□□□ -1.12
PSEN1-219ENST00000556951 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
PSEN1-219ENST00000556951 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-219ENST00000556951 A4D1N5 150 aa8.03□□□□□ -1.12
PSEN1-219ENST00000556951 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-219ENST00000556951 A0A1B0GWB2 263 aa8.02□□□□□ -1.13
PSEN1-219ENST00000556951 NPC2P61916 151 aa8.02□□□□□ -1.13
PSEN1-219ENST00000556951 NHP2Q9NX24 153 aaKnown RBP8.02□□□□□ -1.13
PSEN1-219ENST00000556951 LOC107984156A0A0G2JMH3 177 aa8.01□□□□□ -1.13
PSEN1-219ENST00000556951 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
PSEN1-219ENST00000556951 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
PSEN1-219ENST00000556951 ARL17AQ8IVW1 177 aa8.01□□□□□ -1.13
PSEN1-219ENST00000556951 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
PSEN1-219ENST00000556951 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
PSEN1-219ENST00000556951 KRTAP9-7A8MTY7 169 aa8□□□□□ -1.13
PSEN1-219ENST00000556951 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
PSEN1-219ENST00000556951 SLPIP03973 132 aa8□□□□□ -1.13
PSEN1-219ENST00000556951 CFC1BP0CG36 223 aa8□□□□□ -1.13
PSEN1-219ENST00000556951 CFC1P0CG37 223 aa8□□□□□ -1.13
PSEN1-219ENST00000556951 A0A0B4J2C4 111 aa7.99□□□□□ -1.13
PSEN1-219ENST00000556951 TAX1BP3O14907 124 aa7.99□□□□□ -1.13
PSEN1-219ENST00000556951 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
PSEN1-219ENST00000556951 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
PSEN1-219ENST00000556951 K7ERJ3 54 aa7.98□□□□□ -1.13
PSEN1-219ENST00000556951 CNBPP62633 177 aaKnown RBP7.98□□□□□ -1.13
PSEN1-219ENST00000556951 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
PSEN1-219ENST00000556951 LINC01600Q96MT4 127 aa7.98□□□□□ -1.13
PSEN1-219ENST00000556951 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
PSEN1-219ENST00000556951 PRO1854Q9UHT4 67 aa7.97□□□□□ -1.13
PSEN1-219ENST00000556951 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
PSEN1-219ENST00000556951 C9orf118A6NHY6 69 aa7.95□□□□□ -1.14
PSEN1-219ENST00000556951 NDUFC2O95298 119 aa7.95□□□□□ -1.14
PSEN1-219ENST00000556951 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
PSEN1-219ENST00000556951 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
PSEN1-219ENST00000556951 GAGE2EQ4V326 116 aa7.93□□□□□ -1.14
PSEN1-219ENST00000556951 Q6ZRP5 223 aa7.93□□□□□ -1.14
PSEN1-219ENST00000556951 GAGE2DQ9UEU5 116 aa7.93□□□□□ -1.14
PSEN1-219ENST00000556951 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
PSEN1-219ENST00000556951 A0A087WYN8 130 aa7.92□□□□□ -1.14
PSEN1-219ENST00000556951 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms