RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 TMEM126AQ9H061 195 aa4.28□□□□□ -1.72
CPSF2-205ENST00000556622 IGHV3OR16-9A0A0B4J2B5 98 aa4.27□□□□□ -1.73
CPSF2-205ENST00000556622 KPRPQ5T749 579 aaPredicted RBP4.27□□□□□ -1.73
CPSF2-205ENST00000556622 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
CPSF2-205ENST00000556622 MRAPQ8TCY5 172 aa4.27□□□□□ -1.73
CPSF2-205ENST00000556622 SORL1Q92673 2214 aa4.27□□□□□ -1.73
CPSF2-205ENST00000556622 TMEM256-PLSCR3K7ERE1 68 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 PDE6GP18545 87 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 COX6A2Q02221 97 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 ATP5EP2Q5VTU8 51 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 LINC00612Q8N6U2 182 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 CSNK1G2-AS1Q8NCQ2 148 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 CLEC2BQ92478 149 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 ORMDL1Q9P0S3 153 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 TOMM7Q9P0U1 55 aa4.26□□□□□ -1.73
CPSF2-205ENST00000556622 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 LINC00694P0DN24 101 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 MIFP14174 115 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 RPL35AP18077 110 aaKnown RBP4.25□□□□□ -1.73
CPSF2-205ENST00000556622 NPC2P61916 151 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 EGFEM1PQ0D2K5 195 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 CD164L2Q6UWJ8 174 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
CPSF2-205ENST00000556622 F8WDY8 70 aa4.24□□□□□ -1.73
CPSF2-205ENST00000556622 ATOX1O00244 68 aa4.24□□□□□ -1.73
CPSF2-205ENST00000556622 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
CPSF2-205ENST00000556622 OR13C6PQ8NH95 151 aa4.24□□□□□ -1.73
CPSF2-205ENST00000556622 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
CPSF2-205ENST00000556622 PLAC8L1A1L4L8 177 aa4.23□□□□□ -1.73
CPSF2-205ENST00000556622 A8MZ25 164 aa4.23□□□□□ -1.73
CPSF2-205ENST00000556622 K7EIL1 84 aa4.23□□□□□ -1.73
CPSF2-205ENST00000556622 SPART-AS1P0CW21 52 aa4.23□□□□□ -1.73
CPSF2-205ENST00000556622 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
CPSF2-205ENST00000556622 A0A0U1RRA0 63 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 UQCRQO14949 82 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 PRM2P04554 102 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 GIG44P09565 113 aaPredicted RBP4.22□□□□□ -1.73
CPSF2-205ENST00000556622 DEFB130BP0DP73 79 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 DEFB130AP0DP74 79 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 NANOS2P60321 138 aaKnown RBP4.22□□□□□ -1.73
CPSF2-205ENST00000556622 DAD1P61803 113 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 SDIM1Q6ZPB5 146 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 KLK5Q9Y337 293 aaPredicted RBP4.22□□□□□ -1.73
CPSF2-205ENST00000556622 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 CMYA5Q8N3K9 4069 aa4.22□□□□□ -1.73
CPSF2-205ENST00000556622 TRBV10-3A0A0K0K1G6 114 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 H3BNG1 76 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 BCE1O60756 84 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 PFN2P35080 140 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 CCL18P55774 89 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 SMIM20Q8N5G0 67 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 Q9UF83 564 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 TGP01266 2768 aa4.21□□□□□ -1.74
CPSF2-205ENST00000556622 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 XCL1P47992 114 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 REG3AQ06141 175 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 LELP1Q5T871 98 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 Q6JHZ5 121 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 SOSTDC1Q6X4U4 206 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 C5orf38Q86SI9 138 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 NACAE9PAV3 2078 aa4.2□□□□□ -1.74
CPSF2-205ENST00000556622 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 GVQW2A0A096LPI5 108 aaPredicted RBP4.19□□□□□ -1.74
CPSF2-205ENST00000556622 TRBV7-6A0A0J9YX20 115 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 LECT2O14960 151 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 ANGP03950 147 aaKnown RBP4.19□□□□□ -1.74
CPSF2-205ENST00000556622 CCKP06307 115 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 LINC00337Q8N6G1 96 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 Q8N814 137 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 B9D2Q9BPU9 175 aa4.19□□□□□ -1.74
CPSF2-205ENST00000556622 IGKV2-28A0A075B6P5 120 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 hADV29S1A0JD25 119 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 IGKV2D-28P01615 120 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 IGHV4-30-4P0DP06 118 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 C3orf22Q8N5N4 141 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 CHCHD10Q8WYQ3 142 aaPredicted RBP4.18□□□□□ -1.74
CPSF2-205ENST00000556622 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 LINC00167Q96N53 147 aa4.18□□□□□ -1.74
CPSF2-205ENST00000556622 LOC100131303A0A0U1RQF7 123 aa4.17□□□□□ -1.74
CPSF2-205ENST00000556622 COX7CP15954 63 aa4.17□□□□□ -1.74
CPSF2-205ENST00000556622 RBM3P98179 157 aaKnown RBP4.17□□□□□ -1.74
CPSF2-205ENST00000556622 C9orf153Q5TBE3 101 aa4.17□□□□□ -1.74
CPSF2-205ENST00000556622 LINC00269Q8N2A0 174 aa4.17□□□□□ -1.74
CPSF2-205ENST00000556622 DSCR8Q96T75 97 aa4.17□□□□□ -1.74
CPSF2-205ENST00000556622 A0A1B0GW54 56 aa4.16□□□□□ -1.74
CPSF2-205ENST00000556622 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
CPSF2-205ENST00000556622 Q9HAA7 133 aa4.16□□□□□ -1.74
CPSF2-205ENST00000556622 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 LOC110117498A0A087WWA1 95 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 A0A087WYN8 130 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 CRYGAP11844 174 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 RPS28P62857 69 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms