RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
LINC01550-206ENST00000556462 CARD19Q96LW7 228 aa7.05□□□□□ -1.28
LINC01550-206ENST00000556462 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
LINC01550-206ENST00000556462 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
LINC01550-206ENST00000556462 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
LINC01550-206ENST00000556462 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
LINC01550-206ENST00000556462 Q6ZRP5 223 aa7.04□□□□□ -1.28
LINC01550-206ENST00000556462 HYDINQ4G0P3 5121 aa7.03□□□□□ -1.28
LINC01550-206ENST00000556462 H3BUT2 72 aa7.03□□□□□ -1.28
LINC01550-206ENST00000556462 Q8NDZ9 215 aa7.03□□□□□ -1.28
LINC01550-206ENST00000556462 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
LINC01550-206ENST00000556462 TSPAN13O95857 204 aa7.02□□□□□ -1.29
LINC01550-206ENST00000556462 TLX1NBP0CAT3 122 aa7.02□□□□□ -1.29
LINC01550-206ENST00000556462 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
LINC01550-206ENST00000556462 XAGE1AQ9HD64 81 aa7.02□□□□□ -1.29
LINC01550-206ENST00000556462 A0A1W2PPM0 123 aa7.02□□□□□ -1.29
LINC01550-206ENST00000556462 C14orf177Q52M58 125 aa7.02□□□□□ -1.29
LINC01550-206ENST00000556462 NDUFC2O95298 119 aa7.01□□□□□ -1.29
LINC01550-206ENST00000556462 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
LINC01550-206ENST00000556462 C1orf134Q5TEV5 83 aa7.01□□□□□ -1.29
LINC01550-206ENST00000556462 LINC00337Q8N6G1 96 aa7.01□□□□□ -1.29
LINC01550-206ENST00000556462 IGLV2-33A0A075B6J2 118 aaPredicted RBP7□□□□□ -1.29
LINC01550-206ENST00000556462 GAGE2EQ4V326 116 aa7□□□□□ -1.29
LINC01550-206ENST00000556462 GAGE2DQ9UEU5 116 aa7□□□□□ -1.29
LINC01550-206ENST00000556462 SACSQ9NZJ4 4579 aa7□□□□□ -1.29
LINC01550-206ENST00000556462 DNAH17Q9UFH2 4485 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 A0A087WTM6 91 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 H7C2G1 150 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 TRAV13-2A0A0B4J235 113 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 FABP2P12104 132 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
LINC01550-206ENST00000556462 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
LINC01550-206ENST00000556462 Q8N814 137 aa6.99□□□□□ -1.29
LINC01550-206ENST00000556462 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
LINC01550-206ENST00000556462 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
LINC01550-206ENST00000556462 LOC107984640A0A0U1RRK4 108 aa6.97□□□□□ -1.29
LINC01550-206ENST00000556462 C9orf163Q8N9P6 203 aa6.97□□□□□ -1.29
LINC01550-206ENST00000556462 VPREB1P12018 145 aa6.96□□□□□ -1.29
LINC01550-206ENST00000556462 HECTD4Q9Y4D8 3996 aa6.96□□□□□ -1.3
LINC01550-206ENST00000556462 NCR3O14931 201 aa6.96□□□□□ -1.3
LINC01550-206ENST00000556462 GAGE2BQ13066 116 aa6.96□□□□□ -1.3
LINC01550-206ENST00000556462 Q1RN00 199 aa6.96□□□□□ -1.3
LINC01550-206ENST00000556462 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
LINC01550-206ENST00000556462 RTL8CO15255 209 aa6.95□□□□□ -1.3
LINC01550-206ENST00000556462 TRIAP1O43715 76 aa6.95□□□□□ -1.3
LINC01550-206ENST00000556462 OR13C6PQ8NH95 151 aa6.95□□□□□ -1.3
LINC01550-206ENST00000556462 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 A0A1B0GV72 72 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 J3QR89 54 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 A0A096LNI7 61 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 C16orf90A8MZG2 172 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 F8W1H4 67 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 PSMB2P49721 201 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 TNP2Q05952 138 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 LINC01620Q4KN68 170 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 SERTAD4-AS1Q5TG53 156 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 SMIM11BQ8TCY0 68 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 TMEM126AQ9H061 195 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 PLA2G2DQ9UNK4 145 aa6.94□□□□□ -1.3
LINC01550-206ENST00000556462 RPL28P46779 137 aaKnown RBP6.93□□□□□ -1.3
LINC01550-206ENST00000556462 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
LINC01550-206ENST00000556462 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
LINC01550-206ENST00000556462 LCE6AA0A183 80 aa6.92□□□□□ -1.3
LINC01550-206ENST00000556462 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
LINC01550-206ENST00000556462 IGLV6-57P01721 117 aa6.92□□□□□ -1.3
LINC01550-206ENST00000556462 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
LINC01550-206ENST00000556462 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC01550-206ENST00000556462 M0R378 163 aa6.91□□□□□ -1.3
LINC01550-206ENST00000556462 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
LINC01550-206ENST00000556462 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
LINC01550-206ENST00000556462 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
LINC01550-206ENST00000556462 TRBV10-3A0A0K0K1G6 114 aa6.91□□□□□ -1.3
LINC01550-206ENST00000556462 TCL1BO95988 128 aa6.91□□□□□ -1.3
LINC01550-206ENST00000556462 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.3
LINC01550-206ENST00000556462 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
LINC01550-206ENST00000556462 COX6CP09669 75 aa6.9□□□□□ -1.3
LINC01550-206ENST00000556462 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
LINC01550-206ENST00000556462 H3BMG7 143 aa6.89□□□□□ -1.31
LINC01550-206ENST00000556462 CHTF8P0CG12 524 aa6.89□□□□□ -1.31
LINC01550-206ENST00000556462 TRBV20-1A0A075B6N2 111 aa6.89□□□□□ -1.31
LINC01550-206ENST00000556462 A0A1W2PNN7 141 aa6.89□□□□□ -1.31
LINC01550-206ENST00000556462 PANO1I0J062 215 aa6.88□□□□□ -1.31
LINC01550-206ENST00000556462 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
LINC01550-206ENST00000556462 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
LINC01550-206ENST00000556462 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
LINC01550-206ENST00000556462 C22orf24Q9Y442 160 aa6.88□□□□□ -1.31
LINC01550-206ENST00000556462 FAM19A5Q7Z5A7 132 aaPredicted RBP6.88□□□□□ -1.31
LINC01550-206ENST00000556462 PKIGQ9Y2B9 76 aa6.88□□□□□ -1.31
LINC01550-206ENST00000556462 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
LINC01550-206ENST00000556462 MTURNQ8N3F0 131 aa6.87□□□□□ -1.31
LINC01550-206ENST00000556462 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
LINC01550-206ENST00000556462 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
LINC01550-206ENST00000556462 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
LINC01550-206ENST00000556462 FAM218AQ96MZ4 157 aa6.86□□□□□ -1.31
LINC01550-206ENST00000556462 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
LINC01550-206ENST00000556462 TRAV23DV6A0A075B6W5 121 aa6.86□□□□□ -1.31
LINC01550-206ENST00000556462 LST1O00453 97 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms