RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SCO1O75880 301 aa7.05□□□□□ -1.28
SLIRP-205ENST00000556310 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-205ENST00000556310 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-205ENST00000556310 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
SLIRP-205ENST00000556310 PFN2P35080 140 aa7.04□□□□□ -1.28
SLIRP-205ENST00000556310 COX17Q14061 63 aa7.04□□□□□ -1.28
SLIRP-205ENST00000556310 MRPL55Q7Z7F7 128 aaKnown RBP7.04□□□□□ -1.28
SLIRP-205ENST00000556310 HSPB8Q9UJY1 196 aa7.04□□□□□ -1.28
SLIRP-205ENST00000556310 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
SLIRP-205ENST00000556310 H0Y8G0 127 aa7.03□□□□□ -1.28
SLIRP-205ENST00000556310 NUPR1O60356 82 aa7.03□□□□□ -1.28
SLIRP-205ENST00000556310 DIRC1Q969H9 104 aa7.03□□□□□ -1.28
SLIRP-205ENST00000556310 H0Y9J4 135 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 FABP4P15090 132 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 PLNP26678 52 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-205ENST00000556310 NKAPP1Q8N9T2 125 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
SLIRP-205ENST00000556310 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
SLIRP-205ENST00000556310 LINC00167Q96N53 147 aa7□□□□□ -1.29
SLIRP-205ENST00000556310 DPM2O94777 84 aa6.99□□□□□ -1.29
SLIRP-205ENST00000556310 VPREB1P12018 145 aa6.99□□□□□ -1.29
SLIRP-205ENST00000556310 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
SLIRP-205ENST00000556310 GAGE10A6NGK3 116 aa6.98□□□□□ -1.29
SLIRP-205ENST00000556310 ZNF861PO60384 105 aa6.98□□□□□ -1.29
SLIRP-205ENST00000556310 KRTAP10-8P60410 259 aa6.98□□□□□ -1.29
SLIRP-205ENST00000556310 HERV-K104P63124 156 aa6.98□□□□□ -1.29
SLIRP-205ENST00000556310 MAP1LC3CQ9BXW4 147 aa6.98□□□□□ -1.29
SLIRP-205ENST00000556310 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
SLIRP-205ENST00000556310 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
SLIRP-205ENST00000556310 BCE1O60756 84 aa6.97□□□□□ -1.29
SLIRP-205ENST00000556310 IGKCP01834 107 aa6.97□□□□□ -1.29
SLIRP-205ENST00000556310 LINC00158P58513 81 aa6.97□□□□□ -1.29
SLIRP-205ENST00000556310 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
SLIRP-205ENST00000556310 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
SLIRP-205ENST00000556310 MYMXA0A1B0GTQ4 84 aa6.96□□□□□ -1.3
SLIRP-205ENST00000556310 LEPROTO15243 131 aa6.96□□□□□ -1.3
SLIRP-205ENST00000556310 TSPEAR-AS2P59090 65 aa6.96□□□□□ -1.3
SLIRP-205ENST00000556310 HERVK_113P61574 105 aa6.96□□□□□ -1.3
SLIRP-205ENST00000556310 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
SLIRP-205ENST00000556310 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
SLIRP-205ENST00000556310 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 LINC00587B1AMM8 73 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 SMIM13P0DJ93 91 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
SLIRP-205ENST00000556310 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 Q8NDZ9 215 aa6.95□□□□□ -1.3
SLIRP-205ENST00000556310 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
SLIRP-205ENST00000556310 J3QQQ9 107 aa6.94□□□□□ -1.3
SLIRP-205ENST00000556310 ATP6V1G1O75348 118 aa6.94□□□□□ -1.3
SLIRP-205ENST00000556310 COA6Q5JTJ3 125 aaKnown RBP6.94□□□□□ -1.3
SLIRP-205ENST00000556310 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
SLIRP-205ENST00000556310 NMUP48645 174 aa6.93□□□□□ -1.3
SLIRP-205ENST00000556310 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
SLIRP-205ENST00000556310 LGALS3P17931 250 aaKnown RBP6.92□□□□□ -1.3
SLIRP-205ENST00000556310 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
SLIRP-205ENST00000556310 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
SLIRP-205ENST00000556310 E9PLD3 99 aa6.91□□□□□ -1.3
SLIRP-205ENST00000556310 UBE2AP49459 152 aa6.91□□□□□ -1.3
SLIRP-205ENST00000556310 LINC01545Q5VT33 79 aa6.91□□□□□ -1.3
SLIRP-205ENST00000556310 PET117Q6UWS5 81 aa6.91□□□□□ -1.3
SLIRP-205ENST00000556310 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
SLIRP-205ENST00000556310 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
SLIRP-205ENST00000556310 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
SLIRP-205ENST00000556310 M0R378 163 aa6.9□□□□□ -1.3
SLIRP-205ENST00000556310 RPL13AP40429 203 aaKnown RBP6.9□□□□□ -1.3
SLIRP-205ENST00000556310 IGKV2D-26A0A0A0MRZ7 120 aa6.89□□□□□ -1.31
SLIRP-205ENST00000556310 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
SLIRP-205ENST00000556310 S100A1P23297 94 aa6.89□□□□□ -1.31
SLIRP-205ENST00000556310 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
SLIRP-205ENST00000556310 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
SLIRP-205ENST00000556310 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
SLIRP-205ENST00000556310 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
SLIRP-205ENST00000556310 PRLHP81277 87 aa6.88□□□□□ -1.31
SLIRP-205ENST00000556310 FAM19A1Q7Z5A9 133 aa6.88□□□□□ -1.31
SLIRP-205ENST00000556310 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
SLIRP-205ENST00000556310 DAND5Q8N907 189 aa6.88□□□□□ -1.31
SLIRP-205ENST00000556310 NCR3O14931 201 aa6.87□□□□□ -1.31
SLIRP-205ENST00000556310 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
SLIRP-205ENST00000556310 PRYO14603 147 aa6.86□□□□□ -1.31
SLIRP-205ENST00000556310 KRTDAPP60985 99 aa6.86□□□□□ -1.31
SLIRP-205ENST00000556310 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
SLIRP-205ENST00000556310 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
SLIRP-205ENST00000556310 C20orf202A1L168 122 aa6.85□□□□□ -1.31
SLIRP-205ENST00000556310 A0A087X002 238 aa6.84□□□□□ -1.31
SLIRP-205ENST00000556310 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
SLIRP-205ENST00000556310 SPRR1AP35321 89 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms