RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SCGB1D1O95968 90 aa5.14□□□□□ -1.59
GTF2A1-204ENST00000556268 ADAMTSL4-AS1Q5T5F5 129 aa5.14□□□□□ -1.59
GTF2A1-204ENST00000556268 ATP5L2Q7Z4Y8 100 aa5.14□□□□□ -1.59
GTF2A1-204ENST00000556268 C2orf88Q9BSF0 95 aa5.14□□□□□ -1.59
GTF2A1-204ENST00000556268 LAMTOR2Q9Y2Q5 125 aa5.14□□□□□ -1.59
GTF2A1-204ENST00000556268 Q8N8P6 123 aa5.13□□□□□ -1.59
GTF2A1-204ENST00000556268 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
GTF2A1-204ENST00000556268 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
GTF2A1-204ENST00000556268 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
GTF2A1-204ENST00000556268 CYSLTR1Q9Y271 337 aa5.13□□□□□ -1.59
GTF2A1-204ENST00000556268 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 LOC389332A0A1B0GUA5 103 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 K7EMI3 77 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 SNRPEP62304 92 aaKnown RBP5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 HERVK_113P63121 156 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 SEC11AP67812 179 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 LINC00304Q8N9R0 145 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 RETNLBQ9BQ08 111 aa5.12□□□□□ -1.59
GTF2A1-204ENST00000556268 IGLV9-49A0A0B4J1Y8 123 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 CXCL5P42830 114 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 PEA15Q15121 130 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 ORMDL2Q53FV1 153 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 AKAP14Q86UN6 197 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 MAP1LC3AQ9H492 121 aa5.11□□□□□ -1.59
GTF2A1-204ENST00000556268 PDZD11Q5EBL8 140 aa5.1□□□□□ -1.59
GTF2A1-204ENST00000556268 G0S2P27469 103 aa5.09□□□□□ -1.59
GTF2A1-204ENST00000556268 PNRC1Q12796 327 aaPredicted RBP5.09□□□□□ -1.59
GTF2A1-204ENST00000556268 TIMM17AQ99595 171 aa5.09□□□□□ -1.59
GTF2A1-204ENST00000556268 PPDPFQ9H3Y8 114 aa5.09□□□□□ -1.59
GTF2A1-204ENST00000556268 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
GTF2A1-204ENST00000556268 TOMM6Q96B49 74 aa5.08□□□□□ -1.6
GTF2A1-204ENST00000556268 PLEKHB2Q96CS7 222 aa5.08□□□□□ -1.6
GTF2A1-204ENST00000556268 GEMIN7Q9H840 131 aaKnown RBP5.08□□□□□ -1.6
GTF2A1-204ENST00000556268 TINCRA0A1B0GVN0 87 aa5.07□□□□□ -1.6
GTF2A1-204ENST00000556268 UBE2AP49459 152 aa5.07□□□□□ -1.6
GTF2A1-204ENST00000556268 ERASQ7Z444 233 aa5.07□□□□□ -1.6
GTF2A1-204ENST00000556268 COX7B2Q8TF08 81 aa5.07□□□□□ -1.6
GTF2A1-204ENST00000556268 NXT2Q9NPJ8 142 aaKnown RBP5.07□□□□□ -1.6
GTF2A1-204ENST00000556268 RAB5BP61020 215 aa5.06□□□□□ -1.6
GTF2A1-204ENST00000556268 ASB16-AS1Q495Z4 193 aa5.06□□□□□ -1.6
GTF2A1-204ENST00000556268 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
GTF2A1-204ENST00000556268 CST9LQ9H4G1 147 aa5.06□□□□□ -1.6
GTF2A1-204ENST00000556268 LINC01546A6NGU7 62 aa5.05□□□□□ -1.6
GTF2A1-204ENST00000556268 SCO1O75880 301 aa5.05□□□□□ -1.6
GTF2A1-204ENST00000556268 FP248Q71RG6 208 aaPredicted RBP5.05□□□□□ -1.6
GTF2A1-204ENST00000556268 C3orf22Q8N5N4 141 aa5.05□□□□□ -1.6
GTF2A1-204ENST00000556268 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
GTF2A1-204ENST00000556268 IGKV2-28A0A075B6P5 120 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 M0R378 163 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 IGKV2D-28P01615 120 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 VPREB1P12018 145 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 ADCYAP1P18509 176 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 PRLHP81277 87 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 NKAPP1Q8N9T2 125 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 SCGB3A1Q96QR1 104 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 GNB1LQ9BYB4 327 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 TMEM126AQ9H061 195 aa5.04□□□□□ -1.6
GTF2A1-204ENST00000556268 TMEM238C9JI98 176 aa5.03□□□□□ -1.6
GTF2A1-204ENST00000556268 SND1-IT1Q9HBX3 110 aa5.03□□□□□ -1.6
GTF2A1-204ENST00000556268 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
GTF2A1-204ENST00000556268 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
GTF2A1-204ENST00000556268 LINC01549A6NIU2 74 aa5.02□□□□□ -1.61
GTF2A1-204ENST00000556268 MT-ND4LP03901 98 aa5.02□□□□□ -1.61
GTF2A1-204ENST00000556268 SPINK8P0C7L1 97 aa5.02□□□□□ -1.61
GTF2A1-204ENST00000556268 FAM19A1Q7Z5A9 133 aa5.02□□□□□ -1.61
GTF2A1-204ENST00000556268 ATP5LO75964 103 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 COX17Q14061 63 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 PMVKQ15126 192 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 CBLN2Q8IUK8 224 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 LINC00337Q8N6G1 96 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 Q8NDZ9 215 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
GTF2A1-204ENST00000556268 PFN2P35080 140 aa5□□□□□ -1.61
GTF2A1-204ENST00000556268 DSCR10P59022 87 aa5□□□□□ -1.61
GTF2A1-204ENST00000556268 H3BRM9 83 aa4.99□□□□□ -1.61
GTF2A1-204ENST00000556268 ERG28Q9UKR5 140 aa4.99□□□□□ -1.61
GTF2A1-204ENST00000556268 SPINK1P00995 79 aa4.98□□□□□ -1.61
GTF2A1-204ENST00000556268 IGLC3P0DOY3 106 aa4.98□□□□□ -1.61
GTF2A1-204ENST00000556268 RAB14P61106 215 aa4.97□□□□□ -1.61
GTF2A1-204ENST00000556268 Q8NBF4 154 aa4.97□□□□□ -1.61
GTF2A1-204ENST00000556268 HIGD2AQ9BW72 106 aa4.97□□□□□ -1.61
GTF2A1-204ENST00000556268 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
GTF2A1-204ENST00000556268 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
GTF2A1-204ENST00000556268 SPRR1AP35321 89 aa4.96□□□□□ -1.62
GTF2A1-204ENST00000556268 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
GTF2A1-204ENST00000556268 DAND5Q8N907 189 aa4.96□□□□□ -1.62
GTF2A1-204ENST00000556268 A0A1B0GVG6 124 aa4.95□□□□□ -1.62
GTF2A1-204ENST00000556268 ZNF22P17026 224 aaPredicted RBP4.95□□□□□ -1.62
GTF2A1-204ENST00000556268 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
GTF2A1-204ENST00000556268 SMCR5Q8TEV8 140 aa4.95□□□□□ -1.62
GTF2A1-204ENST00000556268 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
GTF2A1-204ENST00000556268 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
GTF2A1-204ENST00000556268 A0A096LNJ9 63 aa4.94□□□□□ -1.62
GTF2A1-204ENST00000556268 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
GTF2A1-204ENST00000556268 SFTA2Q6UW10 78 aa4.94□□□□□ -1.62
GTF2A1-204ENST00000556268 Q8N377 158 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms