RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 RPS10P5Q9NQ39 176 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 TRAPPC1Q9Y5R8 145 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 IGKV2-28A0A075B6P5 120 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 LINC00587B1AMM8 73 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 GHRHP01286 108 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 IGKV2D-28P01615 120 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 NDUFA6P56556 154 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 PLEKHB2Q96CS7 222 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
PTCSC3-201ENST00000556013 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 TRAV12-1A0A0B4J245 112 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 M0R378 163 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 TMEM170BQ5T4T1 132 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 FAM19A1Q7Z5A9 133 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 CBLN2Q8IUK8 224 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 LINC00518Q8N0U6 118 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 ANAPC11Q9NYG5 84 aa4.52□□□□□ -1.69
PTCSC3-201ENST00000556013 C11orf86A6NJI1 115 aa4.51□□□□□ -1.69
PTCSC3-201ENST00000556013 SVBPQ8N300 66 aa4.51□□□□□ -1.69
PTCSC3-201ENST00000556013 CHCHD1Q96BP2 118 aaKnown RBP4.51□□□□□ -1.69
PTCSC3-201ENST00000556013 CHTOPQ9Y3Y2 248 aaKnown RBP4.51□□□□□ -1.69
PTCSC3-201ENST00000556013 TMEM223A0PJW6 202 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 SNAPINO95295 136 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 APOC3P02656 99 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 LINC00158P58513 81 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 HERV-K104P63124 156 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 PRLHP81277 87 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 LINC00337Q8N6G1 96 aa4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
PTCSC3-201ENST00000556013 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
PTCSC3-201ENST00000556013 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
PTCSC3-201ENST00000556013 SPRR1AP35321 89 aa4.49□□□□□ -1.69
PTCSC3-201ENST00000556013 FP248Q71RG6 208 aaPredicted RBP4.49□□□□□ -1.69
PTCSC3-201ENST00000556013 CDIP1Q9H305 208 aa4.49□□□□□ -1.69
PTCSC3-201ENST00000556013 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
PTCSC3-201ENST00000556013 LOC107984156A0A0G2JMH3 177 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 PRYO14603 147 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 ARL17AQ8IVW1 177 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 Q8NDZ9 215 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 IFI27L1Q96BM0 104 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 SPRR4Q96PI1 79 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
PTCSC3-201ENST00000556013 PMCHL1Q16048 86 aa4.47□□□□□ -1.69
PTCSC3-201ENST00000556013 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
PTCSC3-201ENST00000556013 HIGD2AQ9BW72 106 aa4.47□□□□□ -1.69
PTCSC3-201ENST00000556013 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
PTCSC3-201ENST00000556013 KRTAP4-16G5E9R7 235 aaPredicted RBP4.46□□□□□ -1.7
PTCSC3-201ENST00000556013 SPINK1P00995 79 aa4.46□□□□□ -1.7
PTCSC3-201ENST00000556013 MEIG1Q5JSS6 88 aa4.46□□□□□ -1.7
PTCSC3-201ENST00000556013 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
PTCSC3-201ENST00000556013 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
PTCSC3-201ENST00000556013 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 HSBP1O75506 76 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 SMIM6P0DI80 62 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 C3orf22Q8N5N4 141 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 MIR7-3HGQ8N6C7 128 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 SMCR5Q8TEV8 140 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 YPEL4Q96NS1 127 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 C12orf57Q99622 126 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 RETNLBQ9BQ08 111 aa4.45□□□□□ -1.7
PTCSC3-201ENST00000556013 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
PTCSC3-201ENST00000556013 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
PTCSC3-201ENST00000556013 AKR1D1P51857 326 aa4.44□□□□□ -1.7
PTCSC3-201ENST00000556013 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
PTCSC3-201ENST00000556013 NDUFA12Q9UI09 145 aa4.44□□□□□ -1.7
PTCSC3-201ENST00000556013 C5orf52A6NGY3 159 aa4.43□□□□□ -1.7
PTCSC3-201ENST00000556013 PCP4L1A6NKN8 68 aa4.43□□□□□ -1.7
PTCSC3-201ENST00000556013 LCE2BO14633 110 aa4.43□□□□□ -1.7
PTCSC3-201ENST00000556013 LEPROTO15243 131 aa4.43□□□□□ -1.7
PTCSC3-201ENST00000556013 EIF4EBP3O60516 100 aaPredicted RBP4.43□□□□□ -1.7
PTCSC3-201ENST00000556013 NMUP48645 174 aa4.43□□□□□ -1.7
PTCSC3-201ENST00000556013 TRBV10-3A0A0K0K1G6 114 aa4.42□□□□□ -1.7
PTCSC3-201ENST00000556013 B5MCH6 92 aa4.42□□□□□ -1.7
PTCSC3-201ENST00000556013 LEPROTL1O95214 131 aa4.42□□□□□ -1.7
PTCSC3-201ENST00000556013 NDUFC2O95298 119 aa4.42□□□□□ -1.7
PTCSC3-201ENST00000556013 S100A6P06703 90 aa4.42□□□□□ -1.7
PTCSC3-201ENST00000556013 CBY1Q9Y3M2 126 aa4.42□□□□□ -1.7
PTCSC3-201ENST00000556013 PLNP26678 52 aa4.41□□□□□ -1.7
PTCSC3-201ENST00000556013 JOSD1Q15040 202 aaPredicted RBP4.41□□□□□ -1.7
PTCSC3-201ENST00000556013 FAM19A2Q8N3H0 131 aa4.41□□□□□ -1.7
PTCSC3-201ENST00000556013 Q8NBF4 154 aa4.41□□□□□ -1.7
PTCSC3-201ENST00000556013 HSPB8Q9UJY1 196 aa4.41□□□□□ -1.7
PTCSC3-201ENST00000556013 COLCA2A8K830 154 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 J3QQQ9 107 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 NCR3O14931 201 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 DDTP30046 118 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 HERVK_113P61574 105 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
PTCSC3-201ENST00000556013 SLC25A20O43772 301 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 DPM2O94777 84 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms