RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 IGKV2D-28P01615 120 aa7.02□□□□□ -1.29
VRK1-204ENST00000555351 TRGC2P03986 189 aa7.02□□□□□ -1.29
VRK1-204ENST00000555351 CRYGAP11844 174 aa7.02□□□□□ -1.29
VRK1-204ENST00000555351 UBE2AP49459 152 aa7.02□□□□□ -1.29
VRK1-204ENST00000555351 FAM229BQ4G0N7 80 aa7.02□□□□□ -1.29
VRK1-204ENST00000555351 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
VRK1-204ENST00000555351 LRP2P98164 4655 aa7.01□□□□□ -1.29
VRK1-204ENST00000555351 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
VRK1-204ENST00000555351 LINC00158P58513 81 aa7.01□□□□□ -1.29
VRK1-204ENST00000555351 FAM19A2Q8N3H0 131 aa7.01□□□□□ -1.29
VRK1-204ENST00000555351 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
VRK1-204ENST00000555351 CTAG1AP78358 180 aa7□□□□□ -1.29
VRK1-204ENST00000555351 A0A087X002 238 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 M0R378 163 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 ATP6V1G1O75348 118 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 SCO1O75880 301 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 SERF1AO75920 110 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 PLNP26678 52 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 HSPB8Q9UJY1 196 aa6.99□□□□□ -1.29
VRK1-204ENST00000555351 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 MYMXA0A1B0GTQ4 84 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 COLCA2A8K830 154 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 LINC00310P59036 64 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 Q8NDZ9 215 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 MAP1LC3CQ9BXW4 147 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
VRK1-204ENST00000555351 TMEM238C9JI98 176 aa6.97□□□□□ -1.29
VRK1-204ENST00000555351 GHRHP01286 108 aa6.97□□□□□ -1.29
VRK1-204ENST00000555351 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
VRK1-204ENST00000555351 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
VRK1-204ENST00000555351 LOC107984156A0A0G2JMH3 177 aa6.96□□□□□ -1.3
VRK1-204ENST00000555351 LEPROTO15243 131 aa6.96□□□□□ -1.3
VRK1-204ENST00000555351 DPM2O94777 84 aa6.96□□□□□ -1.3
VRK1-204ENST00000555351 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
VRK1-204ENST00000555351 ARL17AQ8IVW1 177 aa6.96□□□□□ -1.3
VRK1-204ENST00000555351 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
VRK1-204ENST00000555351 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 PRYO14603 147 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 NMUP48645 174 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 PRLHP81277 87 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 MIR7-3HGQ8N6C7 128 aa6.95□□□□□ -1.3
VRK1-204ENST00000555351 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
VRK1-204ENST00000555351 SPRR1AP35321 89 aa6.94□□□□□ -1.3
VRK1-204ENST00000555351 HERVK_113P61574 105 aa6.94□□□□□ -1.3
VRK1-204ENST00000555351 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
VRK1-204ENST00000555351 KCNQ1DNQ9H478 68 aa6.94□□□□□ -1.3
VRK1-204ENST00000555351 H0Y8G0 127 aa6.93□□□□□ -1.3
VRK1-204ENST00000555351 J3QQQ9 107 aa6.93□□□□□ -1.3
VRK1-204ENST00000555351 IGKCP01834 107 aa6.93□□□□□ -1.3
VRK1-204ENST00000555351 PRR4Q16378 134 aa6.93□□□□□ -1.3
VRK1-204ENST00000555351 TRBV10-2A0A0K0K1G8 114 aa6.92□□□□□ -1.3
VRK1-204ENST00000555351 FABP4P15090 132 aa6.92□□□□□ -1.3
VRK1-204ENST00000555351 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
VRK1-204ENST00000555351 TSPEAR-AS2P59090 65 aa6.92□□□□□ -1.3
VRK1-204ENST00000555351 S100A12P80511 92 aa6.92□□□□□ -1.3
VRK1-204ENST00000555351 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
VRK1-204ENST00000555351 ZNF706Q9Y5V0 76 aaPredicted RBP6.92□□□□□ -1.3
VRK1-204ENST00000555351 KRTAP4-16G5E9R7 235 aaPredicted RBP6.91□□□□□ -1.3
VRK1-204ENST00000555351 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
VRK1-204ENST00000555351 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
VRK1-204ENST00000555351 TSPAN13O95857 204 aa6.9□□□□□ -1.3
VRK1-204ENST00000555351 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.3
VRK1-204ENST00000555351 SPRR4Q96PI1 79 aa6.9□□□□□ -1.3
VRK1-204ENST00000555351 NCR3O14931 201 aa6.89□□□□□ -1.31
VRK1-204ENST00000555351 NDUFC2O95298 119 aa6.89□□□□□ -1.31
VRK1-204ENST00000555351 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
VRK1-204ENST00000555351 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
VRK1-204ENST00000555351 ETDCA0A1B0GVM5 59 aa6.88□□□□□ -1.31
VRK1-204ENST00000555351 E9PLD3 99 aa6.88□□□□□ -1.31
VRK1-204ENST00000555351 MIEN1Q9BRT3 115 aa6.88□□□□□ -1.31
VRK1-204ENST00000555351 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
VRK1-204ENST00000555351 LPAP08519 4548 aa6.88□□□□□ -1.31
VRK1-204ENST00000555351 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BKO60814 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BJP06899 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BOP23527 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BBP33778 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BDP58876 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BCP62807 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST2H2BEQ16778 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BHQ93079 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BNQ99877 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 HIST1H2BMQ99879 126 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
VRK1-204ENST00000555351 DDTP30046 118 aa6.86□□□□□ -1.31
VRK1-204ENST00000555351 A0A0J9YXY3 114 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 IGLV6-57P01721 117 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 LINC00483Q53H64 154 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 DAND5Q8N907 189 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 SMCR5Q8TEV8 140 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 CBY1Q9Y3M2 126 aa6.85□□□□□ -1.31
VRK1-204ENST00000555351 B5MCH6 92 aa6.84□□□□□ -1.31
VRK1-204ENST00000555351 TIMM17BO60830 172 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms