RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TAL2Q16559 108 aa6.91□□□□□ -1.3
TDP1-211ENST00000555178 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
TDP1-211ENST00000555178 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
TDP1-211ENST00000555178 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
TDP1-211ENST00000555178 C9orf129Q5T035 196 aaKnown RBP6.9□□□□□ -1.3
TDP1-211ENST00000555178 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.31
TDP1-211ENST00000555178 A0A096LNI7 61 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 PTTG1IPP53801 180 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
TDP1-211ENST00000555178 C9orf163Q8N9P6 203 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 LINC00336Q6ZUF6 198 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 Q6ZVH6 145 aa6.89□□□□□ -1.31
TDP1-211ENST00000555178 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
TDP1-211ENST00000555178 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 M0R143 59 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 IFITM1P13164 125 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
TDP1-211ENST00000555178 HAMPP81172 84 aa6.87□□□□□ -1.31
TDP1-211ENST00000555178 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
TDP1-211ENST00000555178 IGKV2-28A0A075B6P5 120 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 IGKV2D-28P01615 120 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 CFC1P0CG37 223 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
TDP1-211ENST00000555178 NCR3O14931 201 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
TDP1-211ENST00000555178 LOC107984156A0A0G2JMH3 177 aa6.85□□□□□ -1.31
TDP1-211ENST00000555178 ARL17AQ8IVW1 177 aa6.85□□□□□ -1.31
TDP1-211ENST00000555178 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
TDP1-211ENST00000555178 LINC00337Q8N6G1 96 aa6.85□□□□□ -1.31
TDP1-211ENST00000555178 RAB37Q96AX2 223 aa6.84□□□□□ -1.31
TDP1-211ENST00000555178 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.32
TDP1-211ENST00000555178 A6NJY4 79 aa6.84□□□□□ -1.32
TDP1-211ENST00000555178 VPREB1P12018 145 aa6.84□□□□□ -1.32
TDP1-211ENST00000555178 FAM19A5Q7Z5A7 132 aaPredicted RBP6.84□□□□□ -1.32
TDP1-211ENST00000555178 A0A1W2PNN7 141 aa6.83□□□□□ -1.32
TDP1-211ENST00000555178 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
TDP1-211ENST00000555178 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
TDP1-211ENST00000555178 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
TDP1-211ENST00000555178 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
TDP1-211ENST00000555178 A6NDN8 102 aa6.82□□□□□ -1.32
TDP1-211ENST00000555178 H7C2G1 150 aa6.82□□□□□ -1.32
TDP1-211ENST00000555178 A0A0B4J2C4 111 aa6.81□□□□□ -1.32
TDP1-211ENST00000555178 PPDPFQ9H3Y8 114 aa6.81□□□□□ -1.32
TDP1-211ENST00000555178 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
TDP1-211ENST00000555178 GAGE10A6NGK3 116 aa6.81□□□□□ -1.32
TDP1-211ENST00000555178 NDUFC2O95298 119 aa6.81□□□□□ -1.32
TDP1-211ENST00000555178 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
TDP1-211ENST00000555178 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
TDP1-211ENST00000555178 SPACA4Q8TDM5 124 aa6.8□□□□□ -1.32
TDP1-211ENST00000555178 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
TDP1-211ENST00000555178 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
TDP1-211ENST00000555178 PRO1854Q9UHT4 67 aa6.79□□□□□ -1.32
TDP1-211ENST00000555178 TSPAN13O95857 204 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 C22orf24Q9Y442 160 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 TRBV10-3A0A0K0K1G6 114 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 Q6ZSA8 131 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 NKAPP1Q8N9T2 125 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 C7orf33Q8WU49 177 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 DPH3Q96FX2 82 aa6.78□□□□□ -1.32
TDP1-211ENST00000555178 A0A087WYN8 130 aa6.77□□□□□ -1.33
TDP1-211ENST00000555178 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
TDP1-211ENST00000555178 M0QXV9 152 aa6.77□□□□□ -1.33
TDP1-211ENST00000555178 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
TDP1-211ENST00000555178 Q1RN00 199 aa6.77□□□□□ -1.33
TDP1-211ENST00000555178 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
TDP1-211ENST00000555178 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
TDP1-211ENST00000555178 TRAV13-2A0A0B4J235 113 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 IGLV5-37A0A075B6J1 123 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 TRBV10-2A0A0K0K1G8 114 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 H3BUT2 72 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 M0R378 163 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 IGLV6-57P01721 117 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 XGP55808 180 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 SCXQ7RTU7 201 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
TDP1-211ENST00000555178 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
TDP1-211ENST00000555178 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
TDP1-211ENST00000555178 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
TDP1-211ENST00000555178 PKIGQ9Y2B9 76 aa6.75□□□□□ -1.33
TDP1-211ENST00000555178 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
TDP1-211ENST00000555178 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
TDP1-211ENST00000555178 TRIAP1O43715 76 aa6.74□□□□□ -1.33
TDP1-211ENST00000555178 C9orf118A6NHY6 69 aa6.73□□□□□ -1.33
TDP1-211ENST00000555178 TMEM126AQ9H061 195 aa6.73□□□□□ -1.33
TDP1-211ENST00000555178 HSPG2P98160 4391 aa6.73□□□□□ -1.33
TDP1-211ENST00000555178 IGLV1-50A0A075B6I6 118 aa6.72□□□□□ -1.33
TDP1-211ENST00000555178 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
TDP1-211ENST00000555178 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms