RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 Q8IZM0 81 aa7.58□□□□□ -1.2
SHMT2-216ENST00000554975 MTURNQ8N3F0 131 aa7.58□□□□□ -1.2
SHMT2-216ENST00000554975 ANKRD29Q8N6D5 301 aa7.58□□□□□ -1.2
SHMT2-216ENST00000554975 GAGE12HA6NDE8 117 aa7.57□□□□□ -1.2
SHMT2-216ENST00000554975 COX7A2LO14548 114 aa7.57□□□□□ -1.2
SHMT2-216ENST00000554975 NPC2P61916 151 aa7.57□□□□□ -1.2
SHMT2-216ENST00000554975 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
SHMT2-216ENST00000554975 UBE2WQ96B02 151 aa7.56□□□□□ -1.2
SHMT2-216ENST00000554975 SIGMAR1Q99720 223 aa7.56□□□□□ -1.2
SHMT2-216ENST00000554975 VPS13BQ7Z7G8 4022 aa7.56□□□□□ -1.2
SHMT2-216ENST00000554975 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
SHMT2-216ENST00000554975 INAFM2P0DMQ5 153 aa7.55□□□□□ -1.2
SHMT2-216ENST00000554975 EPM2AB3EWF7 344 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 TRACP01848 142 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 LELP1Q5T871 98 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 C2orf82Q6UX34 121 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 DAND5Q8N907 189 aa7.54□□□□□ -1.2
SHMT2-216ENST00000554975 H3BNG1 76 aa7.53□□□□□ -1.2
SHMT2-216ENST00000554975 LINC00158P58513 81 aa7.53□□□□□ -1.2
SHMT2-216ENST00000554975 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
SHMT2-216ENST00000554975 COX17Q14061 63 aa7.53□□□□□ -1.2
SHMT2-216ENST00000554975 MIR7-3HGQ8N6C7 128 aa7.53□□□□□ -1.2
SHMT2-216ENST00000554975 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
SHMT2-216ENST00000554975 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
SHMT2-216ENST00000554975 SOSTDC1Q6X4U4 206 aa7.52□□□□□ -1.21
SHMT2-216ENST00000554975 C15orf53Q8NAA6 179 aa7.52□□□□□ -1.21
SHMT2-216ENST00000554975 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
SHMT2-216ENST00000554975 ANGP03950 147 aaKnown RBP7.51□□□□□ -1.21
SHMT2-216ENST00000554975 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
SHMT2-216ENST00000554975 XCL1P47992 114 aa7.51□□□□□ -1.21
SHMT2-216ENST00000554975 CKS1BP61024 79 aa7.51□□□□□ -1.21
SHMT2-216ENST00000554975 C5orf38Q86SI9 138 aa7.51□□□□□ -1.21
SHMT2-216ENST00000554975 C6orf223Q8N319 242 aa7.51□□□□□ -1.21
SHMT2-216ENST00000554975 FAM240AA0A1B0GVK7 77 aa7.5□□□□□ -1.21
SHMT2-216ENST00000554975 H0YGX0 51 aa7.5□□□□□ -1.21
SHMT2-216ENST00000554975 MALP21145 153 aa7.5□□□□□ -1.21
SHMT2-216ENST00000554975 REG3AQ06141 175 aa7.5□□□□□ -1.21
SHMT2-216ENST00000554975 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
SHMT2-216ENST00000554975 NBDYA0A0U1RRE5 68 aa7.49□□□□□ -1.21
SHMT2-216ENST00000554975 CHCHD10Q8WYQ3 142 aaPredicted RBP7.49□□□□□ -1.21
SHMT2-216ENST00000554975 CLEC2BQ92478 149 aa7.49□□□□□ -1.21
SHMT2-216ENST00000554975 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
SHMT2-216ENST00000554975 NDUFC2O95298 119 aa7.48□□□□□ -1.21
SHMT2-216ENST00000554975 DNAL4O96015 105 aa7.48□□□□□ -1.21
SHMT2-216ENST00000554975 C21orf62-AS1Q17RA5 79 aa7.48□□□□□ -1.21
SHMT2-216ENST00000554975 CCL18P55774 89 aa7.47□□□□□ -1.21
SHMT2-216ENST00000554975 Q5VSD8 79 aa7.47□□□□□ -1.21
SHMT2-216ENST00000554975 LINC00269Q8N2A0 174 aa7.47□□□□□ -1.21
SHMT2-216ENST00000554975 A0A096LPF7 62 aa7.46□□□□□ -1.22
SHMT2-216ENST00000554975 A0A1B0GX51 115 aa7.46□□□□□ -1.22
SHMT2-216ENST00000554975 ACYP1P07311 99 aa7.46□□□□□ -1.22
SHMT2-216ENST00000554975 FUSP35637 526 aaKnown RBP eCLIP7.46□□□□□ -1.22
SHMT2-216ENST00000554975 XGP55808 180 aa7.46□□□□□ -1.22
SHMT2-216ENST00000554975 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
SHMT2-216ENST00000554975 PRR34Q9NV39 138 aa7.46□□□□□ -1.22
SHMT2-216ENST00000554975 SNCGO76070 127 aa7.45□□□□□ -1.22
SHMT2-216ENST00000554975 PFN2P35080 140 aa7.45□□□□□ -1.22
SHMT2-216ENST00000554975 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
SHMT2-216ENST00000554975 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
SHMT2-216ENST00000554975 SPAG11BQ08648 103 aa7.44□□□□□ -1.22
SHMT2-216ENST00000554975 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
SHMT2-216ENST00000554975 IGKV2-28A0A075B6P5 120 aa7.43□□□□□ -1.22
SHMT2-216ENST00000554975 IGKV2D-28P01615 120 aa7.43□□□□□ -1.22
SHMT2-216ENST00000554975 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
SHMT2-216ENST00000554975 GVQW2A0A096LPI5 108 aaPredicted RBP7.42□□□□□ -1.22
SHMT2-216ENST00000554975 A0A1B0GV72 72 aa7.42□□□□□ -1.22
SHMT2-216ENST00000554975 F8WDY8 70 aa7.42□□□□□ -1.22
SHMT2-216ENST00000554975 KIAA0087Q14695 138 aa7.42□□□□□ -1.22
SHMT2-216ENST00000554975 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
SHMT2-216ENST00000554975 TEX49A0A1B0GTD5 131 aa7.41□□□□□ -1.22
SHMT2-216ENST00000554975 OR13C6PQ8NH95 151 aa7.41□□□□□ -1.22
SHMT2-216ENST00000554975 SMIM11BQ8TCY0 68 aa7.41□□□□□ -1.22
SHMT2-216ENST00000554975 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
SHMT2-216ENST00000554975 ESRGQ1W209 222 aa7.4□□□□□ -1.22
SHMT2-216ENST00000554975 Q6Q795 121 aa7.4□□□□□ -1.22
SHMT2-216ENST00000554975 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.22
SHMT2-216ENST00000554975 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
SHMT2-216ENST00000554975 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
SHMT2-216ENST00000554975 BAALC-AS2P0C853 105 aa7.39□□□□□ -1.23
SHMT2-216ENST00000554975 KLK12Q9UKR0 248 aa7.39□□□□□ -1.23
SHMT2-216ENST00000554975 H3BQ85 93 aa7.38□□□□□ -1.23
SHMT2-216ENST00000554975 J3QL48 77 aa7.38□□□□□ -1.23
SHMT2-216ENST00000554975 HAMPP81172 84 aa7.37□□□□□ -1.23
SHMT2-216ENST00000554975 TTC32Q5I0X7 151 aa7.37□□□□□ -1.23
SHMT2-216ENST00000554975 ORMDL1Q9P0S3 153 aa7.37□□□□□ -1.23
SHMT2-216ENST00000554975 GHRHP01286 108 aa7.36□□□□□ -1.23
SHMT2-216ENST00000554975 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
SHMT2-216ENST00000554975 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
SHMT2-216ENST00000554975 LINC01556Q5JQF7 62 aa7.36□□□□□ -1.23
SHMT2-216ENST00000554975 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
SHMT2-216ENST00000554975 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
SHMT2-216ENST00000554975 GAGE2BQ13066 116 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 S100A7L2Q5SY68 101 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 ENHOQ6UWT2 76 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 FAM218AQ96MZ4 157 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms