RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 DIRC1Q969H9 104 aa4.58□□□□□ -1.68
LINC00640-201ENST00000554409 IFI27L1Q96BM0 104 aa4.58□□□□□ -1.68
LINC00640-201ENST00000554409 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
LINC00640-201ENST00000554409 C22orf24Q9Y442 160 aa4.58□□□□□ -1.68
LINC00640-201ENST00000554409 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
LINC00640-201ENST00000554409 H0Y9J4 135 aa4.57□□□□□ -1.68
LINC00640-201ENST00000554409 NUPR1O60356 82 aa4.57□□□□□ -1.68
LINC00640-201ENST00000554409 TRGC2P03986 189 aa4.57□□□□□ -1.68
LINC00640-201ENST00000554409 MRPL55Q7Z7F7 128 aaKnown RBP4.57□□□□□ -1.68
LINC00640-201ENST00000554409 CHTOPQ9Y3Y2 248 aaKnown RBP4.57□□□□□ -1.68
LINC00640-201ENST00000554409 HSBP1O75506 76 aa4.56□□□□□ -1.68
LINC00640-201ENST00000554409 COX17Q14061 63 aa4.56□□□□□ -1.68
LINC00640-201ENST00000554409 TMEM170BQ5T4T1 132 aa4.56□□□□□ -1.68
LINC00640-201ENST00000554409 TNXBP22105 4242 aa4.55□□□□□ -1.68
LINC00640-201ENST00000554409 TMEM223A0PJW6 202 aa4.55□□□□□ -1.68
LINC00640-201ENST00000554409 COLCA2A8K830 154 aa4.55□□□□□ -1.68
LINC00640-201ENST00000554409 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
LINC00640-201ENST00000554409 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
LINC00640-201ENST00000554409 ERG28Q9UKR5 140 aa4.55□□□□□ -1.68
LINC00640-201ENST00000554409 ZNF861PO60384 105 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 BCE1O60756 84 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 SERF1AO75920 110 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 PFN2P35080 140 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 LINC00167Q96N53 147 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
LINC00640-201ENST00000554409 IGLV1-50A0A075B6I6 118 aa4.53□□□□□ -1.68
LINC00640-201ENST00000554409 LEPROTL1O95214 131 aa4.53□□□□□ -1.68
LINC00640-201ENST00000554409 NKAPP1Q8N9T2 125 aa4.53□□□□□ -1.68
LINC00640-201ENST00000554409 VPREB1P12018 145 aa4.52□□□□□ -1.69
LINC00640-201ENST00000554409 RPL28P46779 137 aaKnown RBP4.52□□□□□ -1.69
LINC00640-201ENST00000554409 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
LINC00640-201ENST00000554409 PRR26Q8N8Z3 221 aa4.52□□□□□ -1.69
LINC00640-201ENST00000554409 TMA7Q9Y2S6 64 aaKnown RBP4.52□□□□□ -1.69
LINC00640-201ENST00000554409 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
LINC00640-201ENST00000554409 PLNP26678 52 aa4.51□□□□□ -1.69
LINC00640-201ENST00000554409 HERV-K104P63124 156 aa4.51□□□□□ -1.69
LINC00640-201ENST00000554409 HSPB8Q9UJY1 196 aa4.51□□□□□ -1.69
LINC00640-201ENST00000554409 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
LINC00640-201ENST00000554409 RPL13AP40429 203 aaKnown RBP4.5□□□□□ -1.69
LINC00640-201ENST00000554409 LINC00158P58513 81 aa4.5□□□□□ -1.69
LINC00640-201ENST00000554409 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
LINC00640-201ENST00000554409 IGKV2-28A0A075B6P5 120 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 LINC00587B1AMM8 73 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 H0Y8G0 127 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 LEPROTO15243 131 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 SCO1O75880 301 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 IGKV2D-28P01615 120 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 FABP4P15090 132 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 Q8NDZ9 215 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 NDUFA12Q9UI09 145 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
LINC00640-201ENST00000554409 MYMXA0A1B0GTQ4 84 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 DPM2O94777 84 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 IGKCP01834 107 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 SMIM13P0DJ93 91 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 UBE2AP49459 152 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 TMEM126AQ9H061 195 aa4.48□□□□□ -1.69
LINC00640-201ENST00000554409 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 A0A0U1RRA0 63 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 M0R378 163 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 NMUP48645 174 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 TSPEAR-AS2P59090 65 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 HERVK_113P61574 105 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 MIR7-3HGQ8N6C7 128 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 MAP1LC3CQ9BXW4 147 aa4.47□□□□□ -1.69
LINC00640-201ENST00000554409 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
LINC00640-201ENST00000554409 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
LINC00640-201ENST00000554409 TMEM238C9JI98 176 aa4.46□□□□□ -1.7
LINC00640-201ENST00000554409 J3QQQ9 107 aa4.46□□□□□ -1.7
LINC00640-201ENST00000554409 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.7
LINC00640-201ENST00000554409 PMCHL2Q9BQD1 86 aa4.46□□□□□ -1.7
LINC00640-201ENST00000554409 A0A087X002 238 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 E9PLD3 99 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 SYS1-DBNDD2H3BUS1 97 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 CRYGAP11844 174 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 PRLHP81277 87 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 FAM229BQ4G0N7 80 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
LINC00640-201ENST00000554409 PRYO14603 147 aa4.44□□□□□ -1.7
LINC00640-201ENST00000554409 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
LINC00640-201ENST00000554409 SPRR1AP35321 89 aa4.44□□□□□ -1.7
LINC00640-201ENST00000554409 COA6Q5JTJ3 125 aaKnown RBP4.44□□□□□ -1.7
LINC00640-201ENST00000554409 LINC01545Q5VT33 79 aa4.44□□□□□ -1.7
LINC00640-201ENST00000554409 KCNQ1DNQ9H478 68 aa4.44□□□□□ -1.7
LINC00640-201ENST00000554409 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms