RNA–Protein interactions for RNA: ENST00000554133.5

LINC01578-202, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2

Gene LINC01578, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-202ENST00000554133 PTPRQQ9UMZ3 2332 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 C1orf167Q5SNV9 1468 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 SPTBN1Q01082 2364 aaKnown RBP0.44□□□□□ -2.34
LINC01578-202ENST00000554133 CHD9Q3L8U1 2897 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 A0A087WVE0 104 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 H7BZZ5 65 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 FAUP35544 74 aaKnown RBP0.44□□□□□ -2.34
LINC01578-202ENST00000554133 ASIPP42127 132 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 SNHG12Q9BXW3 62 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 DNAH12Q6ZR08 3092 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 COL12A1Q99715 3063 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 COL4A6Q14031 1691 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 NUP188Q5SRE5 1749 aa0.44□□□□□ -2.34
LINC01578-202ENST00000554133 VCANP13611 3396 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 CFAP47Q6ZTR5 3102 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 UQCRHLA0A096LP55 91 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 TRBV7-4A0A0J9YYF1 115 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 LCN9Q8WX39 176 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 PKDREJQ9NTG1 2253 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 PAPPAQ13219 1627 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 NHSL1Q5SYE7 1610 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 USF3Q68DE3 2245 aa0.43□□□□□ -2.34
LINC01578-202ENST00000554133 H3BQF6 201 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 SYS1-DBNDD2H3BUS1 97 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 WFDC2Q14508 124 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 RANBP2P49792 3224 aaKnown RBP0.42□□□□□ -2.34
LINC01578-202ENST00000554133 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.42□□□□□ -2.346e-19■■■■■ 46.1
LINC01578-202ENST00000554133 LRBAP50851 2863 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 DNHD1Q96M86 4753 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 SPEGQ15772 3267 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 RAPGEF2Q9Y4G8 1499 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 EYSQ5T1H1 3165 aa0.42□□□□□ -2.34
LINC01578-202ENST00000554133 MAP1AP78559 2803 aaPredicted RBP0.41□□□□□ -2.34
LINC01578-202ENST00000554133 TRBV7-7A0A0K0K1E9 115 aa0.41□□□□□ -2.34
LINC01578-202ENST00000554133 AKAP12Q02952 1782 aa0.41□□□□□ -2.34
LINC01578-202ENST00000554133 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
LINC01578-202ENST00000554133 CSMD1Q96PZ7 3565 aa0.4□□□□□ -2.34
LINC01578-202ENST00000554133 SZT2Q5T011 3432 aa0.4□□□□□ -2.34
LINC01578-202ENST00000554133 NLRP1Q9C000 1473 aa0.4□□□□□ -2.34
LINC01578-202ENST00000554133 DNAJC13O75165 2243 aa0.4□□□□□ -2.34
LINC01578-202ENST00000554133 CSMD3Q7Z407 3707 aa0.4□□□□□ -2.34
LINC01578-202ENST00000554133 ABCC2Q92887 1545 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 LINC00959A0A1B0GUT2 108 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 Q9H521 79 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 NF1P21359 2839 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 TULP4Q9NRJ4 1543 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 U3KQA8 63 aa0.4□□□□□ -2.35
LINC01578-202ENST00000554133 XRN1Q8IZH2 1706 aaKnown RBP0.39□□□□□ -2.35
LINC01578-202ENST00000554133 ANKRD26Q9UPS8 1709 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 PLEKHH2Q8IVE3 1493 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 URB1O60287 2271 aaKnown RBP0.39□□□□□ -2.35
LINC01578-202ENST00000554133 NBASA2RRP1 2371 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 WDR87Q6ZQQ6 2873 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 Q5VSD8 79 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 ZNF720Q7Z2F6 126 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 DEFB123Q8N688 67 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 USH2AO75445 5202 aa0.39□□□□□ -2.35
LINC01578-202ENST00000554133 MKI67P46013 3256 aaKnown RBP0.38□□□□□ -2.35
LINC01578-202ENST00000554133 H0Y9P7 68 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 GYPAP02724 150 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 ARMS2P0C7Q2 107 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 COX6B1P14854 86 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 GNGT1P63211 74 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 DEFB109BQ30KR1 87 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 ETDBQ3ZM63 59 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 DEFB107AQ8IZN7 70 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 NBPF19A0A087WUL8 3843 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 A0A0G2JMZ2 1700 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 RELNP78509 3460 aa0.38□□□□□ -2.35
LINC01578-202ENST00000554133 A0A1B0GU69 56 aa0.37□□□□□ -2.35
LINC01578-202ENST00000554133 C6orf201Q7Z4U5 140 aa0.37□□□□□ -2.35
LINC01578-202ENST00000554133 TROQ12816 1431 aaPredicted RBP0.37□□□□□ -2.35
LINC01578-202ENST00000554133 MARF1Q9Y4F3 1742 aaKnown RBP0.37□□□□□ -2.35
LINC01578-202ENST00000554133 EP400Q96L91 3159 aa0.37□□□□□ -2.35
LINC01578-202ENST00000554133 CLTCQ00610 1675 aaKnown RBP0.37□□□□□ -2.35
LINC01578-202ENST00000554133 HMGN3Q15651 99 aa0.37□□□□□ -2.35
LINC01578-202ENST00000554133 CSPG4Q6UVK1 2322 aa0.37□□□□□ -2.35
LINC01578-202ENST00000554133 BAZ1AQ9NRL2 1556 aaPredicted RBP0.37□□□□□ -2.35
LINC01578-202ENST00000554133 LAMA3Q16787 3333 aa0.36□□□□□ -2.35
LINC01578-202ENST00000554133 NRXN1Q9ULB1 1477 aa0.36□□□□□ -2.35
LINC01578-202ENST00000554133 CENPEQ02224 2701 aa0.36□□□□□ -2.35
LINC01578-202ENST00000554133 CRYBG3Q68DQ2 2970 aa0.36□□□□□ -2.35
LINC01578-202ENST00000554133 EPRSP07814 1512 aaKnown RBP0.35□□□□□ -2.35
LINC01578-202ENST00000554133 UNC80Q8N2C7 3258 aa0.35□□□□□ -2.35
LINC01578-202ENST00000554133 SPRR1AP35321 89 aa0.35□□□□□ -2.35
LINC01578-202ENST00000554133 USMG5Q96IX5 58 aa0.35□□□□□ -2.35
LINC01578-202ENST00000554133 KNDC1Q76NI1 1749 aa0.35□□□□□ -2.35
LINC01578-202ENST00000554133 PPRC1Q5VV67 1664 aaKnown RBP0.35□□□□□ -2.35
LINC01578-202ENST00000554133 FANCAO15360 1455 aa0.35□□□□□ -2.35
LINC01578-202ENST00000554133 APC2O95996 2303 aa0.35□□□□□ -2.35
LINC01578-202ENST00000554133 ALKAL2Q6UX46 152 aa0.34□□□□□ -2.35
LINC01578-202ENST00000554133 V9GYS6 101 aa0.34□□□□□ -2.35
LINC01578-202ENST00000554133 DCHS1Q96JQ0 3298 aa0.34□□□□□ -2.35
LINC01578-202ENST00000554133 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
LINC01578-202ENST00000554133 CCDC141Q6ZP82 1450 aa0.34□□□□□ -2.35
LINC01578-202ENST00000554133 KMT2AQ03164 3969 aa0.34□□□□□ -2.36
LINC01578-202ENST00000554133 F8WEM9 126 aa0.34□□□□□ -2.36
LINC01578-202ENST00000554133 LEPROTL1O95214 131 aa0.34□□□□□ -2.36
LINC01578-202ENST00000554133 TTC37Q6PGP7 1564 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms