RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 Q6ZRP5 223 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 Q8N814 137 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 RAB37Q96AX2 223 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 KMT2AQ03164 3969 aa7.03□□□□□ -1.28
PABPN1-203ENST00000553960 LY6G6CO95867 125 aa7.02□□□□□ -1.29
PABPN1-203ENST00000553960 IGLV6-57P01721 117 aa7.02□□□□□ -1.29
PABPN1-203ENST00000553960 VPREB1P12018 145 aa7.02□□□□□ -1.29
PABPN1-203ENST00000553960 RPL28P46779 137 aaKnown RBP7.02□□□□□ -1.29
PABPN1-203ENST00000553960 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
PABPN1-203ENST00000553960 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
PABPN1-203ENST00000553960 TRBV20-1A0A075B6N2 111 aa7.01□□□□□ -1.29
PABPN1-203ENST00000553960 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
PABPN1-203ENST00000553960 TSPAN13O95857 204 aa7.01□□□□□ -1.29
PABPN1-203ENST00000553960 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
PABPN1-203ENST00000553960 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
PABPN1-203ENST00000553960 A0A0U1RRA0 63 aa7□□□□□ -1.29
PABPN1-203ENST00000553960 K7ERJ3 54 aa7□□□□□ -1.29
PABPN1-203ENST00000553960 SDIM1Q6ZPB5 146 aa7□□□□□ -1.29
PABPN1-203ENST00000553960 LINC01600Q96MT4 127 aa7□□□□□ -1.29
PABPN1-203ENST00000553960 M0R378 163 aa6.99□□□□□ -1.29
PABPN1-203ENST00000553960 FABP2P12104 132 aa6.99□□□□□ -1.29
PABPN1-203ENST00000553960 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
PABPN1-203ENST00000553960 RTL8CO15255 209 aa6.98□□□□□ -1.29
PABPN1-203ENST00000553960 A0A1B0GX51 115 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 H0YGX0 51 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 H3BUT2 72 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 M0R2N4 97 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 COX6CP09669 75 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 RPL13AP40429 203 aaKnown RBP6.97□□□□□ -1.29
PABPN1-203ENST00000553960 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 Q8NDZ9 215 aa6.97□□□□□ -1.29
PABPN1-203ENST00000553960 LECT2O14960 151 aa6.96□□□□□ -1.3
PABPN1-203ENST00000553960 NPC2P61916 151 aa6.96□□□□□ -1.3
PABPN1-203ENST00000553960 GTF2H5Q6ZYL4 71 aa6.96□□□□□ -1.3
PABPN1-203ENST00000553960 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
PABPN1-203ENST00000553960 A0A1B0GV90 55 aa6.95□□□□□ -1.3
PABPN1-203ENST00000553960 K7EP34 96 aa6.95□□□□□ -1.3
PABPN1-203ENST00000553960 M0QXV9 152 aa6.95□□□□□ -1.3
PABPN1-203ENST00000553960 UBE2V1Q13404 147 aa6.95□□□□□ -1.3
PABPN1-203ENST00000553960 KCNQ1DNQ9H478 68 aa6.95□□□□□ -1.3
PABPN1-203ENST00000553960 TRIAP1O43715 76 aa6.94□□□□□ -1.3
PABPN1-203ENST00000553960 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
PABPN1-203ENST00000553960 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
PABPN1-203ENST00000553960 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 A0A096LNI7 61 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 SPRR1AP35321 89 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
PABPN1-203ENST00000553960 GAGE2EQ4V326 116 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 SMIM11BQ8TCY0 68 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 GAGE2DQ9UEU5 116 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 DNAH17Q9UFH2 4485 aa6.93□□□□□ -1.3
PABPN1-203ENST00000553960 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
PABPN1-203ENST00000553960 LST1O00453 97 aa6.92□□□□□ -1.3
PABPN1-203ENST00000553960 TRACP01848 142 aa6.92□□□□□ -1.3
PABPN1-203ENST00000553960 SPCS1Q9Y6A9 102 aa6.92□□□□□ -1.3
PABPN1-203ENST00000553960 IGLV1-50A0A075B6I6 118 aa6.91□□□□□ -1.3
PABPN1-203ENST00000553960 TNP2Q05952 138 aa6.91□□□□□ -1.3
PABPN1-203ENST00000553960 VAMP3Q15836 100 aa6.91□□□□□ -1.3
PABPN1-203ENST00000553960 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
PABPN1-203ENST00000553960 SPACA4Q8TDM5 124 aa6.91□□□□□ -1.3
PABPN1-203ENST00000553960 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
PABPN1-203ENST00000553960 PRYO14603 147 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 INAFM2P0DMQ5 153 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
PABPN1-203ENST00000553960 SERTAD4-AS1Q5TG53 156 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 Q6ZSA8 131 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.3
PABPN1-203ENST00000553960 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 C22orf24Q9Y442 160 aa6.9□□□□□ -1.3
PABPN1-203ENST00000553960 FRAS1Q86XX4 4008 aa6.9□□□□□ -1.31
PABPN1-203ENST00000553960 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
PABPN1-203ENST00000553960 F8W1H4 67 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 H3BQ85 93 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 TCL1BO95988 128 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 PSMB2P49721 201 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 Q1RN00 199 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
PABPN1-203ENST00000553960 TRAV23DV6A0A075B6W5 121 aa6.88□□□□□ -1.31
PABPN1-203ENST00000553960 H0Y9J4 135 aa6.88□□□□□ -1.31
PABPN1-203ENST00000553960 ZNF73O43830 326 aaPredicted RBP6.88□□□□□ -1.31
PABPN1-203ENST00000553960 OR13C6PQ8NH95 151 aa6.88□□□□□ -1.31
PABPN1-203ENST00000553960 HECTD4Q9Y4D8 3996 aa6.87□□□□□ -1.31
PABPN1-203ENST00000553960 SACSQ9NZJ4 4579 aa6.87□□□□□ -1.31
PABPN1-203ENST00000553960 IGLV5-52A0A0A0MRZ9 124 aa6.87□□□□□ -1.31
PABPN1-203ENST00000553960 NCR3O14931 201 aa6.87□□□□□ -1.31
PABPN1-203ENST00000553960 SCGB1C2P0DMR2 95 aa6.87□□□□□ -1.31
PABPN1-203ENST00000553960 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
PABPN1-203ENST00000553960 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
PABPN1-203ENST00000553960 A0A1W2PNN7 141 aa6.86□□□□□ -1.31
PABPN1-203ENST00000553960 SNCGO76070 127 aa6.86□□□□□ -1.31
PABPN1-203ENST00000553960 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
PABPN1-203ENST00000553960 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
PABPN1-203ENST00000553960 H3BT86 120 aa6.85□□□□□ -1.31
PABPN1-203ENST00000553960 H7C2G1 150 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms