RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 VPS8Q8N3P4 1428 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 NEBP20929 6669 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 SETXQ7Z333 2677 aaKnown RBP-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 PKD1L3Q7Z443 1732 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 ATRQ13535 2644 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 I3L3M4 83 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 ARMS2P0C7Q2 107 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 RBP2P50120 134 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 S100A10P60903 97 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 GNGT1P63211 74 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 ACBD7Q8N6N7 88 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 APLNQ9ULZ1 77 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 SPTBN1Q01082 2364 aaKnown RBP-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 GVINP1Q7Z2Y8 2422 aa-0.38□□□□□ -2.47
LINC00648-201ENST00000553747 SRRM2Q9UQ35 2752 aaKnown RBP-0.39□□□□□ -2.47
LINC00648-201ENST00000553747 PREX1Q8TCU6 1659 aa-0.39□□□□□ -2.47
LINC00648-201ENST00000553747 LINC00032P0C843 101 aa-0.39□□□□□ -2.47
LINC00648-201ENST00000553747 TROQ12816 1431 aaPredicted RBP-0.39□□□□□ -2.47
LINC00648-201ENST00000553747 TRBV7-7A0A0K0K1E9 115 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 ATP6V1G2-DDX39BF2Z307 99 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 CCL22O00626 93 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 HMGN3Q15651 99 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 KRTAP19-7Q3SYF9 63 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 H1FX-AS1Q4G0G2 97 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 MRPL34Q9BQ48 92 aaKnown RBP-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 AKAP12Q02952 1782 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 BCORQ6W2J9 1755 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 ADAMTS12P58397 1594 aa-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.4□□□□□ -2.47
LINC00648-201ENST00000553747 ATP10BO94823 1461 aa-0.41□□□□□ -2.47
LINC00648-201ENST00000553747 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 DEFB135Q30KP9 77 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 ETDBQ3ZM63 59 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 DPY30Q9C005 99 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 ANKRD36A6QL64 1941 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 CSPG4Q6UVK1 2322 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 FLNBO75369 2602 aaKnown RBP-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 ABCC10Q5T3U5 1492 aa-0.41□□□□□ -2.48
LINC00648-201ENST00000553747 RYR3Q15413 4870 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 PTPN23Q9H3S7 1636 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 RGPD2P0DJD1 1756 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 KIF20BQ96Q89 1820 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 UQCRHLA0A096LP55 91 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 ALKAL2Q6UX46 152 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 ZNF720Q7Z2F6 126 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 CLIP1P30622 1438 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 CEP162Q5TB80 1403 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 HIVEP1P15822 2718 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 LAMA5O15230 3695 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 PKD1P98161 4303 aa-0.42□□□□□ -2.48
LINC00648-201ENST00000553747 SVEP1Q4LDE5 3571 aa-0.43□□□□□ -2.48
LINC00648-201ENST00000553747 UBR1Q8IWV7 1749 aa-0.43□□□□□ -2.48
LINC00648-201ENST00000553747 SPTY2D1-AS1A0A0U1RR47 76 aa-0.43□□□□□ -2.48
LINC00648-201ENST00000553747 C9orf62Q8N4C0 152 aa-0.43□□□□□ -2.48
LINC00648-201ENST00000553747 MAGI2Q86UL8 1455 aa-0.43□□□□□ -2.48
LINC00648-201ENST00000553747 HERC2O95714 4834 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 F8WEM9 126 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 COL5A1-AS1Q5SY13 56 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 UBE2D4Q9Y2X8 147 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 CREBBPQ92793 2442 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 MAP1BP46821 2468 aaKnown RBP-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 TIAM2Q8IVF5 1701 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 HERC1Q15751 4861 aa-0.44□□□□□ -2.48
LINC00648-201ENST00000553747 D6R8Y8 96 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 NCMAPQ5T1S8 102 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 MUSTN1Q8IVN3 82 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 PSENENQ9NZ42 101 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 LRRC7Q96NW7 1537 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 TEP1Q99973 2627 aaKnown RBP-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 RGPD8O14715 1765 aaPredicted RBP-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 RGPD5Q99666 1765 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 REV3LO60673 3130 aa-0.45□□□□□ -2.48
LINC00648-201ENST00000553747 APC2O95996 2303 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 FAT3Q8TDW7 4589 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 SPTA1P02549 2419 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 ATP7BP35670 1465 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 LRRC9Q6ZRR7 1453 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 SUPT6HQ7KZ85 1726 aaKnown RBP-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 GOLGA4Q13439 2230 aaKnown RBP-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 M0R143 59 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 LEPROTL1O95214 131 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 IGLC2P0DOY2 106 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 IGLC3P0DOY3 106 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 KRTAP6-2Q3LI66 62 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 NF1P21359 2839 aa-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 CICQ96RK0 1608 aaPredicted RBP-0.46□□□□□ -2.48
LINC00648-201ENST00000553747 RGPD1P0DJD0 1748 aa-0.47□□□□□ -2.48
LINC00648-201ENST00000553747 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
LINC00648-201ENST00000553747 FAUP35544 74 aaKnown RBP-0.47□□□□□ -2.48
LINC00648-201ENST00000553747 CDKN2A-AS1Q9UH64 79 aa-0.47□□□□□ -2.48
LINC00648-201ENST00000553747 FAT1Q14517 4588 aa-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 TMEM131LA2VDJ0 1609 aa-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 S100A8P05109 93 aa-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 LELP1Q5T871 98 aa-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 HIGD1BQ9P298 99 aa-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 POLR1AO95602 1720 aaPredicted RBP-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 URB1O60287 2271 aaKnown RBP-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 ABCC3O15438 1527 aa-0.48□□□□□ -2.49
LINC00648-201ENST00000553747 SETD2Q9BYW2 2564 aaPredicted RBP-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms