RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
ACTN1-209ENST00000553659 DMBT1Q9UGM3 2413 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-209ENST00000553659 COX6CP09669 75 aa10.6□□□□□ -0.71
ACTN1-209ENST00000553659 SCGB1C2P0DMR2 95 aa10.6□□□□□ -0.71
ACTN1-209ENST00000553659 PSMB2P49721 201 aa10.6□□□□□ -0.71
ACTN1-209ENST00000553659 COX17Q14061 63 aa10.6□□□□□ -0.71
ACTN1-209ENST00000553659 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
ACTN1-209ENST00000553659 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
ACTN1-209ENST00000553659 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
ACTN1-209ENST00000553659 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
ACTN1-209ENST00000553659 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-209ENST00000553659 LINC00158P58513 81 aa10.59□□□□□ -0.71
ACTN1-209ENST00000553659 NPC2P61916 151 aa10.58□□□□□ -0.72
ACTN1-209ENST00000553659 ENHOQ6UWT2 76 aa10.58□□□□□ -0.72
ACTN1-209ENST00000553659 DAND5Q8N907 189 aa10.58□□□□□ -0.72
ACTN1-209ENST00000553659 IGLV10-54A0A075B6I4 117 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 TRAV13-2A0A0B4J235 113 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 EIF4EBP3O60516 100 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-209ENST00000553659 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 Q8N3U1 123 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 MIR7-3HGQ8N6C7 128 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
ACTN1-209ENST00000553659 A0A0U1RRA0 63 aa10.56□□□□□ -0.72
ACTN1-209ENST00000553659 FLG2Q5D862 2391 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-209ENST00000553659 FAT1Q14517 4588 aa10.55□□□□□ -0.72
ACTN1-209ENST00000553659 RPL13AP40429 203 aaKnown RBP10.55□□□□□ -0.72
ACTN1-209ENST00000553659 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
ACTN1-209ENST00000553659 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
ACTN1-209ENST00000553659 LRCOL1A6NCL2 159 aa10.54□□□□□ -0.72
ACTN1-209ENST00000553659 F8WDY8 70 aa10.54□□□□□ -0.72
ACTN1-209ENST00000553659 H3BMG7 143 aa10.54□□□□□ -0.72
ACTN1-209ENST00000553659 ATXN8Q156A1 80 aa10.54□□□□□ -0.72
ACTN1-209ENST00000553659 SOSTDC1Q6X4U4 206 aa10.54□□□□□ -0.72
ACTN1-209ENST00000553659 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-209ENST00000553659 H7C2G1 150 aa10.53□□□□□ -0.72
ACTN1-209ENST00000553659 PSCAO43653 123 aa10.53□□□□□ -0.72
ACTN1-209ENST00000553659 SND1-IT1Q9HBX3 110 aa10.53□□□□□ -0.72
ACTN1-209ENST00000553659 HAMPP81172 84 aa10.52□□□□□ -0.73
ACTN1-209ENST00000553659 C1orf43Q9BWL3 253 aa10.52□□□□□ -0.73
ACTN1-209ENST00000553659 GVQW2A0A096LPI5 108 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-209ENST00000553659 K7ERU9 68 aa10.51□□□□□ -0.73
ACTN1-209ENST00000553659 TCL1BO95988 128 aa10.51□□□□□ -0.73
ACTN1-209ENST00000553659 PFN2P35080 140 aa10.51□□□□□ -0.73
ACTN1-209ENST00000553659 VPS13BQ7Z7G8 4022 aa10.5□□□□□ -0.73
ACTN1-209ENST00000553659 M0QXV9 152 aa10.5□□□□□ -0.73
ACTN1-209ENST00000553659 TRIAP1O43715 76 aa10.5□□□□□ -0.73
ACTN1-209ENST00000553659 NDUFC2O95298 119 aa10.49□□□□□ -0.73
ACTN1-209ENST00000553659 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
ACTN1-209ENST00000553659 Q8N814 137 aa10.49□□□□□ -0.73
ACTN1-209ENST00000553659 RMI2Q96E14 147 aa10.49□□□□□ -0.73
ACTN1-209ENST00000553659 PRO0461Q9UI25 63 aa10.49□□□□□ -0.73
ACTN1-209ENST00000553659 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
ACTN1-209ENST00000553659 OCIAD2Q56VL3 154 aa10.48□□□□□ -0.73
ACTN1-209ENST00000553659 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
ACTN1-209ENST00000553659 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
ACTN1-209ENST00000553659 FAM30AQ9NZY2 134 aa10.47□□□□□ -0.73
ACTN1-209ENST00000553659 J3QL48 77 aa10.46□□□□□ -0.73
ACTN1-209ENST00000553659 J3QR89 54 aa10.46□□□□□ -0.73
ACTN1-209ENST00000553659 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.73
ACTN1-209ENST00000553659 Q9HAA7 133 aa10.46□□□□□ -0.73
ACTN1-209ENST00000553659 MYCBP2O75592 4640 aa10.46□□□□□ -0.74
ACTN1-209ENST00000553659 RPL28P46779 137 aaKnown RBP10.45□□□□□ -0.74
ACTN1-209ENST00000553659 LST1O00453 97 aa10.44□□□□□ -0.74
ACTN1-209ENST00000553659 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
ACTN1-209ENST00000553659 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
ACTN1-209ENST00000553659 IGKV2-28A0A075B6P5 120 aa10.43□□□□□ -0.74
ACTN1-209ENST00000553659 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
ACTN1-209ENST00000553659 IGKV2D-28P01615 120 aa10.43□□□□□ -0.74
ACTN1-209ENST00000553659 WFDC2Q14508 124 aa10.43□□□□□ -0.74
ACTN1-209ENST00000553659 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
ACTN1-209ENST00000553659 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
ACTN1-209ENST00000553659 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
ACTN1-209ENST00000553659 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
ACTN1-209ENST00000553659 CAMK2N2Q96S95 79 aa10.42□□□□□ -0.74
ACTN1-209ENST00000553659 H0YGX0 51 aa10.41□□□□□ -0.74
ACTN1-209ENST00000553659 H3BT86 120 aa10.41□□□□□ -0.74
ACTN1-209ENST00000553659 SLC25A20O43772 301 aa10.41□□□□□ -0.74
ACTN1-209ENST00000553659 Q6ZSA8 131 aa10.41□□□□□ -0.74
ACTN1-209ENST00000553659 LINC00337Q8N6G1 96 aa10.41□□□□□ -0.74
ACTN1-209ENST00000553659 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-209ENST00000553659 C9JAW5 83 aa10.39□□□□□ -0.75
ACTN1-209ENST00000553659 TRACP01848 142 aa10.39□□□□□ -0.75
ACTN1-209ENST00000553659 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
ACTN1-209ENST00000553659 C15orf56Q8N910 161 aa10.39□□□□□ -0.75
ACTN1-209ENST00000553659 TMEM126AQ9H061 195 aa10.39□□□□□ -0.75
ACTN1-209ENST00000553659 C6orf48Q9UBA6 75 aa10.39□□□□□ -0.75
ACTN1-209ENST00000553659 ETDBQ3ZM63 59 aa10.38□□□□□ -0.75
ACTN1-209ENST00000553659 C10orf25Q5T742 122 aa10.38□□□□□ -0.75
ACTN1-209ENST00000553659 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
ACTN1-209ENST00000553659 OR13C6PQ8NH95 151 aa10.38□□□□□ -0.75
ACTN1-209ENST00000553659 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-209ENST00000553659 RNF151Q2KHN1 245 aa10.37□□□□□ -0.75
ACTN1-209ENST00000553659 ANKRD29Q8N6D5 301 aa10.37□□□□□ -0.75
ACTN1-209ENST00000553659 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
ACTN1-209ENST00000553659 C9orf116Q5BN46 136 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-209ENST00000553659 PPDPFLQ8WWR9 84 aa10.36□□□□□ -0.75
ACTN1-209ENST00000553659 CBY1Q9Y3M2 126 aa10.36□□□□□ -0.75
ACTN1-209ENST00000553659 LECT2O14960 151 aa10.35□□□□□ -0.75
ACTN1-209ENST00000553659 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms