RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ICE1Q9Y2F5 2266 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 SMIM27A0A1W2PRY6 76 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 H3BRN7 92 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 IGKV4-1P06312 121 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 BRD3OSQ6XYD6 125 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 OBSCN-AS1Q96MR7 158 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 Q96NJ1 140 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 GAFA1Q96PS6 74 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 LMO7Q8WWI1 1683 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 TOGARAM1Q9Y4F4 1720 aa1.83□□□□□ -2.12
TDP1-207ENST00000553617 FN1P02751 2386 aaKnown RBP1.83□□□□□ -2.12
TDP1-207ENST00000553617 TRGV2A0A075B6R0 118 aa1.82□□□□□ -2.12
TDP1-207ENST00000553617 LOC110117498A0A087WWA1 95 aa1.82□□□□□ -2.12
TDP1-207ENST00000553617 PLNP26678 52 aa1.82□□□□□ -2.12
TDP1-207ENST00000553617 CAV3P56539 151 aa1.82□□□□□ -2.12
TDP1-207ENST00000553617 DEFB112Q30KQ8 113 aa1.82□□□□□ -2.12
TDP1-207ENST00000553617 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
TDP1-207ENST00000553617 ANKRD17O75179 2603 aaKnown RBP1.82□□□□□ -2.12
TDP1-207ENST00000553617 INE1O15225 51 aa1.81□□□□□ -2.12
TDP1-207ENST00000553617 SERF2P84101 59 aa1.81□□□□□ -2.12
TDP1-207ENST00000553617 LINC00472Q9H8W2 130 aa1.81□□□□□ -2.12
TDP1-207ENST00000553617 COL4A2P08572 1712 aa1.8□□□□□ -2.12
TDP1-207ENST00000553617 ACYP2P14621 99 aa1.8□□□□□ -2.12
TDP1-207ENST00000553617 SNRPGP62308 76 aaKnown RBP1.8□□□□□ -2.12
TDP1-207ENST00000553617 TNCP24821 2201 aa1.8□□□□□ -2.12
TDP1-207ENST00000553617 CACNA1CQ13936 2221 aa1.79□□□□□ -2.12
TDP1-207ENST00000553617 ABCA1O95477 2261 aa1.79□□□□□ -2.12
TDP1-207ENST00000553617 LINC00959A0A1B0GUT2 108 aa1.79□□□□□ -2.12
TDP1-207ENST00000553617 M0R2N4 97 aa1.79□□□□□ -2.12
TDP1-207ENST00000553617 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
TDP1-207ENST00000553617 COA5Q86WW8 74 aa1.79□□□□□ -2.12
TDP1-207ENST00000553617 ZNF625Q96I27 306 aaPredicted RBP1.79□□□□□ -2.12
TDP1-207ENST00000553617 F5P12259 2224 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 A0A0G2JMZ2 1700 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 LRRC37A2A6NM11 1700 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 LRRC37AA6NMS7 1700 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 DUOX1Q9NRD9 1551 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 A0A1B0GU69 56 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 M0R1W7 72 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 NDUFA4O00483 81 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 CACNA1GO43497 2377 aa1.78□□□□□ -2.12
TDP1-207ENST00000553617 I3L3M4 83 aa1.77□□□□□ -2.13
TDP1-207ENST00000553617 KRTAP10-1P60331 282 aa1.77□□□□□ -2.13
TDP1-207ENST00000553617 KMT2BQ9UMN6 2715 aaPredicted RBP1.77□□□□□ -2.13
TDP1-207ENST00000553617 IGIPA6NJ69 53 aa1.76□□□□□ -2.13
TDP1-207ENST00000553617 SPINK4O60575 86 aa1.76□□□□□ -2.13
TDP1-207ENST00000553617 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
TDP1-207ENST00000553617 Q6ZQY7 126 aa1.76□□□□□ -2.13
TDP1-207ENST00000553617 CCL19Q99731 98 aa1.76□□□□□ -2.13
TDP1-207ENST00000553617 LINC01546A6NGU7 62 aa1.75□□□□□ -2.13
TDP1-207ENST00000553617 COX6B1P14854 86 aa1.75□□□□□ -2.13
TDP1-207ENST00000553617 COX7BP24311 80 aa1.75□□□□□ -2.13
TDP1-207ENST00000553617 TIMM8BQ9Y5J9 83 aaPredicted RBP1.75□□□□□ -2.13
TDP1-207ENST00000553617 CADP27708 2225 aa1.74□□□□□ -2.13
TDP1-207ENST00000553617 BPTFQ12830 3046 aa1.73□□□□□ -2.13
TDP1-207ENST00000553617 NCR3O14931 201 aa1.73□□□□□ -2.13
TDP1-207ENST00000553617 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
TDP1-207ENST00000553617 HAMPP81172 84 aa1.73□□□□□ -2.13
TDP1-207ENST00000553617 DEFB114Q30KQ6 69 aa1.73□□□□□ -2.13
TDP1-207ENST00000553617 Q6ZRN7 208 aaPredicted RBP1.73□□□□□ -2.13
TDP1-207ENST00000553617 BAHCC1Q9P281 2608 aa1.72□□□□□ -2.13
TDP1-207ENST00000553617 ETDCA0A1B0GVM5 59 aa1.72□□□□□ -2.13
TDP1-207ENST00000553617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.72□□□□□ -2.13
TDP1-207ENST00000553617 Q6ZRX8 168 aa1.72□□□□□ -2.13
TDP1-207ENST00000553617 SSBP3-AS1Q7Z2R9 100 aa1.72□□□□□ -2.13
TDP1-207ENST00000553617 GOLGA4Q13439 2230 aaKnown RBP1.72□□□□□ -2.13
TDP1-207ENST00000553617 TNRC6CQ9HCJ0 1690 aaKnown RBP1.71□□□□□ -2.14
TDP1-207ENST00000553617 NDUFA3O95167 84 aa1.71□□□□□ -2.14
TDP1-207ENST00000553617 FXYD6P3P58550 94 aa1.71□□□□□ -2.14
TDP1-207ENST00000553617 RPS27LQ71UM5 84 aaKnown RBP1.71□□□□□ -2.14
TDP1-207ENST00000553617 SMIM11BQ8TCY0 68 aa1.71□□□□□ -2.14
TDP1-207ENST00000553617 PLAC4Q8WY50 150 aa1.71□□□□□ -2.14
TDP1-207ENST00000553617 KCNQ1DNQ9H478 68 aa1.71□□□□□ -2.14
TDP1-207ENST00000553617 URB1O60287 2271 aaKnown RBP1.7□□□□□ -2.14
TDP1-207ENST00000553617 ASCC3Q8N3C0 2202 aaKnown RBP1.7□□□□□ -2.14
TDP1-207ENST00000553617 G3V318 75 aa1.7□□□□□ -2.14
TDP1-207ENST00000553617 H0YGX0 51 aa1.7□□□□□ -2.14
TDP1-207ENST00000553617 PIN1P1O15428 100 aa1.7□□□□□ -2.14
TDP1-207ENST00000553617 RPL38P63173 70 aaKnown RBP1.7□□□□□ -2.14
TDP1-207ENST00000553617 PLXNB2O15031 1838 aa1.7□□□□□ -2.14
TDP1-207ENST00000553617 ASXL3Q9C0F0 2248 aa1.7□□□□□ -2.14
TDP1-207ENST00000553617 KNTC1P50748 2209 aa1.69□□□□□ -2.14
TDP1-207ENST00000553617 GVQW2A0A096LPI5 108 aaPredicted RBP1.69□□□□□ -2.14
TDP1-207ENST00000553617 C10orf99Q6UWK7 81 aa1.69□□□□□ -2.14
TDP1-207ENST00000553617 TECTAO75443 2155 aa1.68□□□□□ -2.14
TDP1-207ENST00000553617 CPSF4LA6NMK7 179 aaKnown RBP1.68□□□□□ -2.14
TDP1-207ENST00000553617 SSC5DA1L4H1 1573 aa1.68□□□□□ -2.14
TDP1-207ENST00000553617 AHCTF1Q8WYP5 2266 aa1.68□□□□□ -2.14
TDP1-207ENST00000553617 HIVEP2P31629 2446 aa1.67□□□□□ -2.14
TDP1-207ENST00000553617 A0A096LNT2 108 aa1.67□□□□□ -2.14
TDP1-207ENST00000553617 LY6G6CO95867 125 aa1.67□□□□□ -2.14
TDP1-207ENST00000553617 KRTAP13-1Q8IUC0 172 aa1.66□□□□□ -2.14
TDP1-207ENST00000553617 SPTY2D1-AS1A0A0U1RR47 76 aa1.65□□□□□ -2.15
TDP1-207ENST00000553617 MRPL33O75394 65 aaKnown RBP1.65□□□□□ -2.15
TDP1-207ENST00000553617 PRB1P04280 392 aa1.65□□□□□ -2.15
TDP1-207ENST00000553617 CRIP1P50238 77 aa1.65□□□□□ -2.15
TDP1-207ENST00000553617 TMEM167BQ9NRX6 74 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms