RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 SMCO4Q9NRQ5 59 aa7.25□□□□□ -1.25
SIX1-202ENST00000553535 IGKV2-28A0A075B6P5 120 aa7.24□□□□□ -1.25
SIX1-202ENST00000553535 A0A096LNJ9 63 aa7.24□□□□□ -1.25
SIX1-202ENST00000553535 IGKV2D-28P01615 120 aa7.24□□□□□ -1.25
SIX1-202ENST00000553535 PFN2P35080 140 aa7.24□□□□□ -1.25
SIX1-202ENST00000553535 IFITM2Q01629 132 aa7.24□□□□□ -1.25
SIX1-202ENST00000553535 VPREB1P12018 145 aa7.23□□□□□ -1.25
SIX1-202ENST00000553535 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
SIX1-202ENST00000553535 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
SIX1-202ENST00000553535 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
SIX1-202ENST00000553535 NDUFA6P56556 154 aa7.21□□□□□ -1.25
SIX1-202ENST00000553535 COX17Q14061 63 aa7.21□□□□□ -1.25
SIX1-202ENST00000553535 ERG28Q9UKR5 140 aa7.21□□□□□ -1.25
SIX1-202ENST00000553535 FAT4Q6V0I7 4981 aa7.21□□□□□ -1.26
SIX1-202ENST00000553535 MUC17Q685J3 4493 aa7.21□□□□□ -1.26
SIX1-202ENST00000553535 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 PRLHP81277 87 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 C10orf91Q5T1B1 145 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 LINC00304Q8N9R0 145 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 TMEM126AQ9H061 195 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 LINC00614P0C842 121 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
SIX1-202ENST00000553535 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 Q8NDZ9 215 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 C18orf32Q8TCD1 76 aa7.2□□□□□ -1.26
SIX1-202ENST00000553535 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
SIX1-202ENST00000553535 A0A0U1RQV1 116 aa7.19□□□□□ -1.26
SIX1-202ENST00000553535 M0R378 163 aa7.19□□□□□ -1.26
SIX1-202ENST00000553535 PLEKHB2Q96CS7 222 aa7.19□□□□□ -1.26
SIX1-202ENST00000553535 ZNF625Q96I27 306 aaPredicted RBP7.19□□□□□ -1.26
SIX1-202ENST00000553535 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
SIX1-202ENST00000553535 RPS10P5Q9NQ39 176 aa7.19□□□□□ -1.26
SIX1-202ENST00000553535 C11orf86A6NJI1 115 aa7.18□□□□□ -1.26
SIX1-202ENST00000553535 HBDP02042 147 aa7.18□□□□□ -1.26
SIX1-202ENST00000553535 CTAG1AP78358 180 aa7.18□□□□□ -1.26
SIX1-202ENST00000553535 RHEBQ15382 184 aa7.18□□□□□ -1.26
SIX1-202ENST00000553535 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
SIX1-202ENST00000553535 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
SIX1-202ENST00000553535 COMMD7Q86VX2 200 aa7.17□□□□□ -1.26
SIX1-202ENST00000553535 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
SIX1-202ENST00000553535 TRAPPC1Q9Y5R8 145 aa7.17□□□□□ -1.26
SIX1-202ENST00000553535 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
SIX1-202ENST00000553535 TMEM170BQ5T4T1 132 aa7.16□□□□□ -1.26
SIX1-202ENST00000553535 CBLN2Q8IUK8 224 aa7.16□□□□□ -1.26
SIX1-202ENST00000553535 TPRXLQ17RH7 258 aa7.15□□□□□ -1.27
SIX1-202ENST00000553535 C3orf22Q8N5N4 141 aa7.15□□□□□ -1.27
SIX1-202ENST00000553535 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
SIX1-202ENST00000553535 LINC00158P58513 81 aa7.13□□□□□ -1.27
SIX1-202ENST00000553535 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
SIX1-202ENST00000553535 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
SIX1-202ENST00000553535 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
SIX1-202ENST00000553535 CHTOPQ9Y3Y2 248 aaKnown RBP7.12□□□□□ -1.27
SIX1-202ENST00000553535 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
SIX1-202ENST00000553535 SPRR4Q96PI1 79 aa7.12□□□□□ -1.27
SIX1-202ENST00000553535 A0A0U1RRA0 63 aa7.11□□□□□ -1.27
SIX1-202ENST00000553535 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
SIX1-202ENST00000553535 TRAV12-1A0A0B4J245 112 aa7.1□□□□□ -1.27
SIX1-202ENST00000553535 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
SIX1-202ENST00000553535 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
SIX1-202ENST00000553535 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
SIX1-202ENST00000553535 SPRR1AP35321 89 aa7.08□□□□□ -1.28
SIX1-202ENST00000553535 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
SIX1-202ENST00000553535 PRYO14603 147 aa7.08□□□□□ -1.28
SIX1-202ENST00000553535 BOD1L2Q8IYS8 172 aa7.08□□□□□ -1.28
SIX1-202ENST00000553535 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
SIX1-202ENST00000553535 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
SIX1-202ENST00000553535 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
SIX1-202ENST00000553535 APOC3P02656 99 aa7.07□□□□□ -1.28
SIX1-202ENST00000553535 LINC00337Q8N6G1 96 aa7.07□□□□□ -1.28
SIX1-202ENST00000553535 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
SIX1-202ENST00000553535 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
SIX1-202ENST00000553535 SMCR5Q8TEV8 140 aa7.06□□□□□ -1.28
SIX1-202ENST00000553535 YPEL4Q96NS1 127 aa7.06□□□□□ -1.28
SIX1-202ENST00000553535 SNAPINO95295 136 aa7.05□□□□□ -1.28
SIX1-202ENST00000553535 HERV-K104P63124 156 aa7.05□□□□□ -1.28
SIX1-202ENST00000553535 MEIG1Q5JSS6 88 aa7.05□□□□□ -1.28
SIX1-202ENST00000553535 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
SIX1-202ENST00000553535 NCR3O14931 201 aa7.04□□□□□ -1.28
SIX1-202ENST00000553535 SVBPQ8N300 66 aa7.04□□□□□ -1.28
SIX1-202ENST00000553535 DAND5Q8N907 189 aa7.04□□□□□ -1.28
SIX1-202ENST00000553535 TRBV10-3A0A0K0K1G6 114 aa7.03□□□□□ -1.28
SIX1-202ENST00000553535 LINC00587B1AMM8 73 aa7.03□□□□□ -1.28
SIX1-202ENST00000553535 Q8NBF4 154 aa7.03□□□□□ -1.28
SIX1-202ENST00000553535 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
SIX1-202ENST00000553535 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
SIX1-202ENST00000553535 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
SIX1-202ENST00000553535 LOC107984156A0A0G2JMH3 177 aa7.02□□□□□ -1.29
SIX1-202ENST00000553535 MYMXA0A1B0GTQ4 84 aa7.02□□□□□ -1.29
SIX1-202ENST00000553535 NDUFA5Q16718 116 aa7.02□□□□□ -1.29
SIX1-202ENST00000553535 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
SIX1-202ENST00000553535 ARL17AQ8IVW1 177 aa7.02□□□□□ -1.29
SIX1-202ENST00000553535 FAM19A2Q8N3H0 131 aa7.02□□□□□ -1.29
SIX1-202ENST00000553535 SPINK1P00995 79 aa7.01□□□□□ -1.29
SIX1-202ENST00000553535 MAP1LC3CQ9BXW4 147 aa7.01□□□□□ -1.29
SIX1-202ENST00000553535 B5MCH6 92 aa7□□□□□ -1.29
SIX1-202ENST00000553535 HSBP1O75506 76 aa7□□□□□ -1.29
SIX1-202ENST00000553535 ERC2-IT1O76042 136 aa6.99□□□□□ -1.29
SIX1-202ENST00000553535 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
SIX1-202ENST00000553535 LEPROTO15243 131 aa6.99□□□□□ -1.29
SIX1-202ENST00000553535 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms