RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C2orf48Q96LS8 159 aa4.92□□□□□ -1.62
ATXN3-221ENST00000553498 CARD19Q96LW7 228 aa4.92□□□□□ -1.62
ATXN3-221ENST00000553498 A0A0U1RRA0 63 aa4.91□□□□□ -1.62
ATXN3-221ENST00000553498 H0YGX0 51 aa4.91□□□□□ -1.62
ATXN3-221ENST00000553498 H7C2G1 150 aa4.91□□□□□ -1.62
ATXN3-221ENST00000553498 PFN2P35080 140 aa4.91□□□□□ -1.62
ATXN3-221ENST00000553498 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
ATXN3-221ENST00000553498 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-221ENST00000553498 BAHCC1Q9P281 2608 aa4.91□□□□□ -1.62
ATXN3-221ENST00000553498 CMYA5Q8N3K9 4069 aa4.9□□□□□ -1.62
ATXN3-221ENST00000553498 MAST4O15021 2626 aa4.9□□□□□ -1.62
ATXN3-221ENST00000553498 H3BT86 120 aa4.9□□□□□ -1.63
ATXN3-221ENST00000553498 LST1O00453 97 aa4.9□□□□□ -1.63
ATXN3-221ENST00000553498 TRACP01848 142 aa4.9□□□□□ -1.63
ATXN3-221ENST00000553498 LINC01620Q4KN68 170 aa4.9□□□□□ -1.63
ATXN3-221ENST00000553498 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.63
ATXN3-221ENST00000553498 TRBV10-2A0A0K0K1G8 114 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 SLC25A20O43772 301 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 WFDC2Q14508 124 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 C2orf82Q6UX34 121 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 TEN1Q86WV5 123 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 TMEM126AQ9H061 195 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 CBY1Q9Y3M2 126 aa4.89□□□□□ -1.63
ATXN3-221ENST00000553498 IGKV2-28A0A075B6P5 120 aa4.88□□□□□ -1.63
ATXN3-221ENST00000553498 A0A1B0GX51 115 aa4.88□□□□□ -1.63
ATXN3-221ENST00000553498 C9JAW5 83 aa4.88□□□□□ -1.63
ATXN3-221ENST00000553498 IGKV2D-28P01615 120 aa4.88□□□□□ -1.63
ATXN3-221ENST00000553498 PRB2P02812 416 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-221ENST00000553498 ANKRD29Q8N6D5 301 aa4.88□□□□□ -1.63
ATXN3-221ENST00000553498 LINC00588Q9Y4M8 146 aa4.88□□□□□ -1.63
ATXN3-221ENST00000553498 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 IGKV2D-24A0A075B6R9 120 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 SNCGO76070 127 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 KRTAP21-3Q3LHN1 58 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 ETDBQ3ZM63 59 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 LINC00337Q8N6G1 96 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 PPDPFLQ8WWR9 84 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 CAMK2N2Q96S95 79 aa4.87□□□□□ -1.63
ATXN3-221ENST00000553498 NOTCH3Q9UM47 2321 aa4.86□□□□□ -1.63
ATXN3-221ENST00000553498 NUPR2A6NF83 97 aa4.86□□□□□ -1.63
ATXN3-221ENST00000553498 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
ATXN3-221ENST00000553498 NDUFC2-KCTD14E9PQ53 114 aa4.85□□□□□ -1.63
ATXN3-221ENST00000553498 C10orf25Q5T742 122 aa4.85□□□□□ -1.63
ATXN3-221ENST00000553498 C15orf56Q8N910 161 aa4.85□□□□□ -1.63
ATXN3-221ENST00000553498 OR13C6PQ8NH95 151 aa4.85□□□□□ -1.63
ATXN3-221ENST00000553498 SMIM11BQ8TCY0 68 aa4.85□□□□□ -1.63
ATXN3-221ENST00000553498 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
ATXN3-221ENST00000553498 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
ATXN3-221ENST00000553498 H3BQ85 93 aa4.84□□□□□ -1.63
ATXN3-221ENST00000553498 DNAL4O96015 105 aa4.84□□□□□ -1.63
ATXN3-221ENST00000553498 TLX1NBP0CAT3 122 aa4.84□□□□□ -1.63
ATXN3-221ENST00000553498 C6orf223Q8N319 242 aa4.84□□□□□ -1.63
ATXN3-221ENST00000553498 VPS25Q9BRG1 176 aa4.84□□□□□ -1.63
ATXN3-221ENST00000553498 PKD1L1Q8TDX9 2849 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 STAB1Q9NY15 2570 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 SYCNQ0VAF6 134 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 C9orf116Q5BN46 136 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-221ENST00000553498 TTC32Q5I0X7 151 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 CLEC2BQ92478 149 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 APLNQ9ULZ1 77 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 COL6A5A8TX70 2615 aa4.83□□□□□ -1.64
ATXN3-221ENST00000553498 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
ATXN3-221ENST00000553498 IGLV6-57P01721 117 aa4.82□□□□□ -1.64
ATXN3-221ENST00000553498 HIGD2BQ4VC39 106 aa4.82□□□□□ -1.64
ATXN3-221ENST00000553498 Q6ZRU5 148 aa4.82□□□□□ -1.64
ATXN3-221ENST00000553498 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
ATXN3-221ENST00000553498 PKIGQ9Y2B9 76 aa4.82□□□□□ -1.64
ATXN3-221ENST00000553498 M0R378 163 aa4.81□□□□□ -1.64
ATXN3-221ENST00000553498 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
ATXN3-221ENST00000553498 C14orf177Q52M58 125 aa4.81□□□□□ -1.64
ATXN3-221ENST00000553498 UBE2DNLQ8IWF7 75 aa4.81□□□□□ -1.64
ATXN3-221ENST00000553498 Q9HAA7 133 aa4.81□□□□□ -1.64
ATXN3-221ENST00000553498 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 USP17L23D6RBM5 183 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 ACYP1P07311 99 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 LINC00526Q96FQ7 95 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 DNAH9Q9NYC9 4486 aa4.8□□□□□ -1.64
ATXN3-221ENST00000553498 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
ATXN3-221ENST00000553498 VPREB1P12018 145 aa4.79□□□□□ -1.64
ATXN3-221ENST00000553498 FAM218AQ96MZ4 157 aa4.79□□□□□ -1.64
ATXN3-221ENST00000553498 IGLV5-37A0A075B6J1 123 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 TRAV23DV6A0A075B6W5 121 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 NCR3O14931 201 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 CNBPP62633 177 aaKnown RBP4.78□□□□□ -1.64
ATXN3-221ENST00000553498 RPL18AQ02543 176 aaKnown RBP4.78□□□□□ -1.64
ATXN3-221ENST00000553498 C6orf99Q4VX62 202 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 Q6ZRP5 223 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 Q8N814 137 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 DIRC1Q969H9 104 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 XAGE1AQ9HD64 81 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 ORMDL1Q9P0S3 153 aa4.78□□□□□ -1.64
ATXN3-221ENST00000553498 A0A087WYN8 130 aa4.77□□□□□ -1.65
ATXN3-221ENST00000553498 LOC107984640A0A0U1RRK4 108 aa4.77□□□□□ -1.65
ATXN3-221ENST00000553498 TEX49A0A1B0GTD5 131 aa4.77□□□□□ -1.65
ATXN3-221ENST00000553498 JMJD7-PLA2G4BH0Y9G9 81 aa4.77□□□□□ -1.65
ATXN3-221ENST00000553498 LECT2O14960 151 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms