RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 LINC01558Q9Y6Z2 57 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 CACNA1CQ13936 2221 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 MUC22E2RYF6 1773 aaPredicted RBP1.19□□□□□ -2.22
NPAS3-212ENST00000552696 MED12Q93074 2177 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 CUL9Q8IWT3 2517 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 TNCP24821 2201 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 LOC110117498A0A087WWA1 95 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 H3BRN7 92 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 CCL22O00626 93 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 UQCR11O14957 56 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 CLPSP04118 112 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 C1orf137Q5JT78 98 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 CSAG1Q6PB30 78 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.18□□□□□ -2.22
NPAS3-212ENST00000552696 Q6ZTI0 123 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 DEFB106AQ8N104 65 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 GAFA1Q96PS6 74 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 TTTY12Q9BZ98 90 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 CEP192Q8TEP8 1941 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 ICE1Q9Y2F5 2266 aa1.18□□□□□ -2.22
NPAS3-212ENST00000552696 ALPK2Q86TB3 2170 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 LCE6AA0A183 80 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 ETDCA0A1B0GVM5 59 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 NDUFA4O00483 81 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 NCR3O14931 201 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 DEFB112Q30KQ8 113 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 LINC00322Q6ZN03 302 aaPredicted RBP1.17□□□□□ -2.22
NPAS3-212ENST00000552696 Q8TAT8 98 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 KLK9Q9UKQ9 250 aa1.17□□□□□ -2.22
NPAS3-212ENST00000552696 A0A0G2JQZ4 141 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 NUPR2A6NF83 97 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 C10orf142B7Z368 130 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 NDUFA1O15239 70 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 MRPL33O75394 65 aaKnown RBP1.16□□□□□ -2.22
NPAS3-212ENST00000552696 CCL18P55774 89 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 CNBPP62633 177 aaKnown RBP1.16□□□□□ -2.22
NPAS3-212ENST00000552696 COX17Q14061 63 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 DEFB113Q30KQ7 82 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 LINC00308Q8TCZ7 52 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 C4orf3Q8WVX3 66 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 ZNF625Q96I27 306 aaPredicted RBP1.16□□□□□ -2.22
NPAS3-212ENST00000552696 CR1P17927 2039 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 COL4A1P02462 1669 aa1.16□□□□□ -2.22
NPAS3-212ENST00000552696 TNRC6BQ9UPQ9 1833 aaKnown RBP1.15□□□□□ -2.22
NPAS3-212ENST00000552696 TRGV2A0A075B6R0 118 aa1.15□□□□□ -2.23
NPAS3-212ENST00000552696 CCL3L1P16619 93 aa1.15□□□□□ -2.23
NPAS3-212ENST00000552696 RPS27P42677 84 aaKnown RBP1.15□□□□□ -2.23
NPAS3-212ENST00000552696 PIGYQ3MUY2 71 aa1.15□□□□□ -2.23
NPAS3-212ENST00000552696 COA5Q86WW8 74 aa1.15□□□□□ -2.23
NPAS3-212ENST00000552696 PLAC8Q9NZF1 115 aa1.15□□□□□ -2.23
NPAS3-212ENST00000552696 CRCT1Q9UGL9 99 aa1.15□□□□□ -2.23
NPAS3-212ENST00000552696 BAHCC1Q9P281 2608 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 KNL1Q8NG31 2342 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 SDK1Q7Z5N4 2213 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 CLPSL1A2RUU4 121 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 IGLV3-1P01715 115 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 RNASE3P12724 160 aaKnown RBP1.14□□□□□ -2.23
NPAS3-212ENST00000552696 PRCDQ00LT1 54 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 SPINK9Q5DT21 86 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 KCNQ1DNQ9H478 68 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 PRO2289Q9P1D8 64 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 ABCA4P78363 2273 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 MALRD1Q5VYJ5 2156 aa1.14□□□□□ -2.23
NPAS3-212ENST00000552696 IGKV2-29A2NJV5 120 aaPredicted RBP1.13□□□□□ -2.23
NPAS3-212ENST00000552696 COX7BP24311 80 aa1.13□□□□□ -2.23
NPAS3-212ENST00000552696 SPINK7P58062 85 aa1.13□□□□□ -2.23
NPAS3-212ENST00000552696 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
NPAS3-212ENST00000552696 SMIM11BQ8TCY0 68 aa1.13□□□□□ -2.23
NPAS3-212ENST00000552696 CNTRLQ7Z7A1 2325 aa1.13□□□□□ -2.23
NPAS3-212ENST00000552696 CADP27708 2225 aa1.13□□□□□ -2.23
NPAS3-212ENST00000552696 KNTC1P50748 2209 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 UNC13CQ8NB66 2214 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 IGKV3-7A0A075B6H7 116 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.12□□□□□ -2.23
NPAS3-212ENST00000552696 TRGV1A0A0A0MS02 117 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 A0A1B0GU69 56 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 TRBV6-4A0A1B0GX49 114 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 J3QKU1 62 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 CRIP1P50238 77 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 KRTAP26-1Q6PEX3 210 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 RP1P56715 2156 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 USF3Q68DE3 2245 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 ANKRD17O75179 2603 aaKnown RBP1.12□□□□□ -2.23
NPAS3-212ENST00000552696 BPTFQ12830 3046 aa1.12□□□□□ -2.23
NPAS3-212ENST00000552696 MED13LQ71F56 2210 aa1.11□□□□□ -2.23
NPAS3-212ENST00000552696 DEFB131BA0A096LNP1 70 aa1.11□□□□□ -2.23
NPAS3-212ENST00000552696 POLR2KP53803 58 aaKnown RBP1.11□□□□□ -2.23
NPAS3-212ENST00000552696 LINC00158P58513 81 aa1.11□□□□□ -2.23
NPAS3-212ENST00000552696 Q6ZQY7 126 aa1.11□□□□□ -2.23
NPAS3-212ENST00000552696 SPRR4Q96PI1 79 aa1.11□□□□□ -2.23
NPAS3-212ENST00000552696 PLCE1Q9P212 2302 aa1.11□□□□□ -2.23
NPAS3-212ENST00000552696 PTPRQQ9UMZ3 2332 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 F5P12259 2224 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 IGKV2-40A0A087WW87 121 aaPredicted RBP1.1□□□□□ -2.23
NPAS3-212ENST00000552696 IGKV3OR2-268A0A0C4DH90 116 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 IGKV2D-40P01614 121 aaPredicted RBP1.1□□□□□ -2.23
NPAS3-212ENST00000552696 PRB1P04280 392 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
NPAS3-212ENST00000552696 RPL37AP61513 92 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms