RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 KLK9Q9UKQ9 250 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 SHROOM3Q8TF72 1996 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 NF1P21359 2839 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 SETD2Q9BYW2 2564 aaPredicted RBP2.24□□□□□ -2.05
USP44-208ENST00000552440 H3BRN7 92 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 SAA2P0DJI9 122 aaPredicted RBP2.24□□□□□ -2.05
USP44-208ENST00000552440 CD52P31358 61 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 Q86TA4 180 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 WFDC10AQ9H1F0 79 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 MGAQ8IWI9 3026 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 CR1P17927 2039 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 ABCA2Q9BZC7 2435 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 POLQO75417 2590 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 COL4A2P08572 1712 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 IGKV3D-7A0A0C4DH55 119 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 IGKV3OR2-268A0A0C4DH90 116 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 IGKV1-17P01599 117 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 LINC00315P59091 139 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 DEFB121Q5J5C9 76 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 COX7B2Q8TF08 81 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 PSENENQ9NZ42 101 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 ARL2-SNX15V9GYD0 113 aa2.23□□□□□ -2.05
USP44-208ENST00000552440 ITPR2Q14571 2701 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 CSMD1Q96PZ7 3565 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 MYMXA0A1B0GTQ4 84 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 FAM223BA6NKX1 122 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 PRR9Q5T870 116 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 USP9YO00507 2555 aaPredicted RBP2.22□□□□□ -2.05
USP44-208ENST00000552440 FLNCQ14315 2725 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 DOPEY2Q9Y3R5 2298 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 LRBAP50851 2863 aa2.22□□□□□ -2.05
USP44-208ENST00000552440 DNAL4O96015 105 aa2.21□□□□□ -2.05
USP44-208ENST00000552440 PCNX1Q96RV3 2341 aa2.21□□□□□ -2.05
USP44-208ENST00000552440 OTOGQ6ZRI0 2925 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 AHCTF1Q8WYP5 2266 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 SPENQ96T58 3664 aaKnown RBP2.21□□□□□ -2.06
USP44-208ENST00000552440 LRRK2Q5S007 2527 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 IGLV3-32A0A0A0MS00 114 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 AMELXQ99217 191 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 TTTY12Q9BZ98 90 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 SDK1Q7Z5N4 2213 aa2.21□□□□□ -2.06
USP44-208ENST00000552440 CACNA1EQ15878 2313 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 NAV3Q8IVL0 2385 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 TRGV4A0A0C4DH28 118 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 IGKV2-24A0A0C4DH68 120 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 IGLV3-19P01714 112 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 PLGLAQ15195 96 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 FAM74A4Q5TZK3 123 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 F5P12259 2224 aa2.2□□□□□ -2.06
USP44-208ENST00000552440 COL5A1P20908 1838 aaPredicted RBP2.2□□□□□ -2.06
USP44-208ENST00000552440 PDCD11Q14690 1871 aaKnown RBP2.19□□□□□ -2.06
USP44-208ENST00000552440 ASCC3Q8N3C0 2202 aaKnown RBP2.19□□□□□ -2.06
USP44-208ENST00000552440 A0A087WXM4 84 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 A0A1B0GWA3 101 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 CEBPZOSA8MTT3 80 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 SFTA3P0C7M3 94 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 ARMS2P0C7Q2 107 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 TMEM14CQ9P0S9 112 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 R4GMQ9 66 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 CELSR2Q9HCU4 2923 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 ESPL1Q14674 2120 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 BSNQ9UPA5 3926 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 ADGRG4Q8IZF6 3080 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 UNC13CQ8NB66 2214 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 BOD1L1Q8NFC6 3051 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 NBDYA0A0U1RRE5 68 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 RPL37AP61513 92 aaKnown RBP2.19□□□□□ -2.06
USP44-208ENST00000552440 C6orf201Q7Z4U5 140 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 TSC2P49815 1807 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 LAMA4Q16363 1823 aa2.19□□□□□ -2.06
USP44-208ENST00000552440 UTP20O75691 2785 aaKnown RBP2.19□□□□□ -2.06
USP44-208ENST00000552440 MED12Q93074 2177 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 IGKV2-40A0A087WW87 121 aaPredicted RBP2.18□□□□□ -2.06
USP44-208ENST00000552440 F8VRH5 84 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 LEPROTL1O95214 131 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 IGKV2D-40P01614 121 aaPredicted RBP2.18□□□□□ -2.06
USP44-208ENST00000552440 SPINT3P49223 89 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 CCL18P55774 89 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 LINC00322Q6ZN03 302 aaPredicted RBP2.18□□□□□ -2.06
USP44-208ENST00000552440 PPP1R1CQ8WVI7 109 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 PDZD2O15018 2839 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 DOCK11Q5JSL3 2073 aa2.18□□□□□ -2.06
USP44-208ENST00000552440 NIPBLQ6KC79 2804 aaeCLIP2.18□□□□□ -2.06
USP44-208ENST00000552440 FXYD3Q14802 87 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 ZNF563Q8TA94 476 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 PRR15LQ9BU68 103 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 PROK2Q9HC23 129 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 LINC01558Q9Y6Z2 57 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 V9GYV3 84 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 SPG11Q96JI7 2443 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 CELSR1Q9NYQ6 3014 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 TLN1Q9Y490 2541 aaKnown RBP2.17□□□□□ -2.06
USP44-208ENST00000552440 F8P00451 2351 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 CRYBG3Q68DQ2 2970 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 HIVEP1P15822 2718 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 CENPEQ02224 2701 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 SPAG17Q6Q759 2223 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 TRBV6-5A0A0K0K1A5 114 aa2.17□□□□□ -2.06
USP44-208ENST00000552440 IGKV2-29A2NJV5 120 aaPredicted RBP2.17□□□□□ -2.06
USP44-208ENST00000552440 D6R8Y8 96 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms