RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DAND5Q8N907 189 aa8□□□□□ -1.13
CHMP1A-210ENST00000551981 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
CHMP1A-210ENST00000551981 IGLC3P0DOY3 106 aa7.99□□□□□ -1.13
CHMP1A-210ENST00000551981 SFTA2Q6UW10 78 aa7.99□□□□□ -1.13
CHMP1A-210ENST00000551981 A0A1B0GVG6 124 aa7.98□□□□□ -1.13
CHMP1A-210ENST00000551981 Q8NDZ9 215 aa7.98□□□□□ -1.13
CHMP1A-210ENST00000551981 ZNF625Q96I27 306 aaPredicted RBP7.98□□□□□ -1.13
CHMP1A-210ENST00000551981 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
CHMP1A-210ENST00000551981 FA2HQ7L5A8 372 aa7.97□□□□□ -1.13
CHMP1A-210ENST00000551981 SMCO4Q9NRQ5 59 aa7.97□□□□□ -1.13
CHMP1A-210ENST00000551981 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
CHMP1A-210ENST00000551981 NDUFA6P56556 154 aa7.96□□□□□ -1.14
CHMP1A-210ENST00000551981 FAM19A2Q8N3H0 131 aa7.96□□□□□ -1.14
CHMP1A-210ENST00000551981 TRAV9-1A0A075B6T8 112 aa7.95□□□□□ -1.14
CHMP1A-210ENST00000551981 PRYO14603 147 aa7.94□□□□□ -1.14
CHMP1A-210ENST00000551981 LINC00158P58513 81 aa7.94□□□□□ -1.14
CHMP1A-210ENST00000551981 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
CHMP1A-210ENST00000551981 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
CHMP1A-210ENST00000551981 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
CHMP1A-210ENST00000551981 LINC00483Q53H64 154 aa7.91□□□□□ -1.14
CHMP1A-210ENST00000551981 TMEM170BQ5T4T1 132 aa7.91□□□□□ -1.14
CHMP1A-210ENST00000551981 SLC25A20O43772 301 aa7.9□□□□□ -1.14
CHMP1A-210ENST00000551981 ATP6V1G1O75348 118 aa7.9□□□□□ -1.14
CHMP1A-210ENST00000551981 S100PP25815 95 aa7.9□□□□□ -1.14
CHMP1A-210ENST00000551981 XP32Q5T750 250 aa7.9□□□□□ -1.14
CHMP1A-210ENST00000551981 Q8N377 158 aa7.9□□□□□ -1.14
CHMP1A-210ENST00000551981 KCNQ1DNQ9H478 68 aa7.9□□□□□ -1.14
CHMP1A-210ENST00000551981 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 SPRR1AP35321 89 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 S100A12P80511 92 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 MOBPQ13875 183 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 COX19Q49B96 90 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
CHMP1A-210ENST00000551981 IGLV9-49A0A0B4J1Y8 123 aa7.88□□□□□ -1.15
CHMP1A-210ENST00000551981 C11orf86A6NJI1 115 aa7.88□□□□□ -1.15
CHMP1A-210ENST00000551981 SSBP3-AS1Q7Z2R9 100 aa7.88□□□□□ -1.15
CHMP1A-210ENST00000551981 NCR3O14931 201 aa7.87□□□□□ -1.15
CHMP1A-210ENST00000551981 FABP9Q0Z7S8 132 aa7.87□□□□□ -1.15
CHMP1A-210ENST00000551981 A0A096LNJ9 63 aa7.86□□□□□ -1.15
CHMP1A-210ENST00000551981 KRTAP4-16G5E9R7 235 aaPredicted RBP7.86□□□□□ -1.15
CHMP1A-210ENST00000551981 HBDP02042 147 aa7.86□□□□□ -1.15
CHMP1A-210ENST00000551981 BAGE3Q86Y29 109 aa7.86□□□□□ -1.15
CHMP1A-210ENST00000551981 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
CHMP1A-210ENST00000551981 SMIM13P0DJ93 91 aa7.85□□□□□ -1.15
CHMP1A-210ENST00000551981 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
CHMP1A-210ENST00000551981 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
CHMP1A-210ENST00000551981 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
CHMP1A-210ENST00000551981 LINC00614P0C842 121 aa7.83□□□□□ -1.16
CHMP1A-210ENST00000551981 MIR7-3HGQ8N6C7 128 aa7.83□□□□□ -1.16
CHMP1A-210ENST00000551981 SEC11CQ9BY50 192 aa7.83□□□□□ -1.16
CHMP1A-210ENST00000551981 CHTOPQ9Y3Y2 248 aaKnown RBP7.83□□□□□ -1.16
CHMP1A-210ENST00000551981 B5MCH6 92 aa7.82□□□□□ -1.16
CHMP1A-210ENST00000551981 PMCHL1Q16048 86 aa7.82□□□□□ -1.16
CHMP1A-210ENST00000551981 TMEM223A0PJW6 202 aa7.81□□□□□ -1.16
CHMP1A-210ENST00000551981 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
CHMP1A-210ENST00000551981 HERV-K104P63124 156 aa7.81□□□□□ -1.16
CHMP1A-210ENST00000551981 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
CHMP1A-210ENST00000551981 ERC2-IT1O76042 136 aa7.8□□□□□ -1.16
CHMP1A-210ENST00000551981 MT1HP80294 61 aa7.8□□□□□ -1.16
CHMP1A-210ENST00000551981 C9orf153Q5TBE3 101 aa7.8□□□□□ -1.16
CHMP1A-210ENST00000551981 C18orf32Q8TCD1 76 aa7.8□□□□□ -1.16
CHMP1A-210ENST00000551981 MAP1LC3CQ9BXW4 147 aa7.8□□□□□ -1.16
CHMP1A-210ENST00000551981 TMEM218A2RU14 115 aa7.79□□□□□ -1.16
CHMP1A-210ENST00000551981 UQCC3Q6UW78 93 aa7.79□□□□□ -1.16
CHMP1A-210ENST00000551981 DDTP30046 118 aa7.78□□□□□ -1.16
CHMP1A-210ENST00000551981 KRTAP19-2Q3LHN2 52 aa7.78□□□□□ -1.16
CHMP1A-210ENST00000551981 Q6ZRX8 168 aa7.78□□□□□ -1.16
CHMP1A-210ENST00000551981 Q9BRP9 147 aa7.78□□□□□ -1.16
CHMP1A-210ENST00000551981 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
CHMP1A-210ENST00000551981 CLLU1Q5K131 121 aa7.77□□□□□ -1.17
CHMP1A-210ENST00000551981 TRAV12-1A0A0B4J245 112 aa7.76□□□□□ -1.17
CHMP1A-210ENST00000551981 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
CHMP1A-210ENST00000551981 JOSD1Q15040 202 aaPredicted RBP7.76□□□□□ -1.17
CHMP1A-210ENST00000551981 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
CHMP1A-210ENST00000551981 TRAPPC1Q9Y5R8 145 aa7.76□□□□□ -1.17
CHMP1A-210ENST00000551981 MYMXA0A1B0GTQ4 84 aa7.75□□□□□ -1.17
CHMP1A-210ENST00000551981 LIMD2Q9BT23 127 aa7.74□□□□□ -1.17
CHMP1A-210ENST00000551981 LOC107984156A0A0G2JMH3 177 aa7.73□□□□□ -1.17
CHMP1A-210ENST00000551981 ARL17AQ8IVW1 177 aa7.73□□□□□ -1.17
CHMP1A-210ENST00000551981 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
CHMP1A-210ENST00000551981 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
CHMP1A-210ENST00000551981 RHEBQ15382 184 aa7.72□□□□□ -1.17
CHMP1A-210ENST00000551981 S100A7L2Q5SY68 101 aa7.72□□□□□ -1.17
CHMP1A-210ENST00000551981 IFI27L1Q96BM0 104 aa7.72□□□□□ -1.17
CHMP1A-210ENST00000551981 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
CHMP1A-210ENST00000551981 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
CHMP1A-210ENST00000551981 MIEN1Q9BRT3 115 aa7.71□□□□□ -1.18
CHMP1A-210ENST00000551981 RPS10P5Q9NQ39 176 aa7.71□□□□□ -1.18
CHMP1A-210ENST00000551981 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
CHMP1A-210ENST00000551981 C5orf52A6NGY3 159 aa7.7□□□□□ -1.18
CHMP1A-210ENST00000551981 M0R2T5 61 aa7.7□□□□□ -1.18
CHMP1A-210ENST00000551981 IGLV6-57P01721 117 aa7.7□□□□□ -1.18
CHMP1A-210ENST00000551981 IFITM2Q01629 132 aa7.69□□□□□ -1.18
CHMP1A-210ENST00000551981 COMMD7Q86VX2 200 aa7.69□□□□□ -1.18
CHMP1A-210ENST00000551981 SLC25A34Q6PIV7 304 aa7.68□□□□□ -1.18
CHMP1A-210ENST00000551981 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
CHMP1A-210ENST00000551981 CHCHD1Q96BP2 118 aaKnown RBP7.68□□□□□ -1.18
CHMP1A-210ENST00000551981 ZNF73O43830 326 aaPredicted RBP7.67□□□□□ -1.18
CHMP1A-210ENST00000551981 NDUFC2O95298 119 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms