RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 K7EP34 96 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 FABP2P12104 132 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 FUSP35637 526 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 CKS1BP61024 79 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 SPAG11BQ08648 103 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 C2orf82Q6UX34 121 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 C1orf43Q9BWL3 253 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 ERG28Q9UKR5 140 aa4.9□□□□□ -1.63
SMARCD1-210ENST00000551352 SRRM2Q9UQ35 2752 aaKnown RBP4.89□□□□□ -1.63
SMARCD1-210ENST00000551352 LINC00158P58513 81 aa4.89□□□□□ -1.63
SMARCD1-210ENST00000551352 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
SMARCD1-210ENST00000551352 GTF2H5Q6ZYL4 71 aa4.89□□□□□ -1.63
SMARCD1-210ENST00000551352 Q8N1X5 172 aa4.89□□□□□ -1.63
SMARCD1-210ENST00000551352 SPCS1Q9Y6A9 102 aa4.89□□□□□ -1.63
SMARCD1-210ENST00000551352 IGKV2D-24A0A075B6R9 120 aa4.88□□□□□ -1.63
SMARCD1-210ENST00000551352 GAGE10A6NGK3 116 aa4.88□□□□□ -1.63
SMARCD1-210ENST00000551352 PFN2P35080 140 aa4.88□□□□□ -1.63
SMARCD1-210ENST00000551352 Q9HAA7 133 aa4.88□□□□□ -1.63
SMARCD1-210ENST00000551352 COX17Q14061 63 aa4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 LYRM7Q5U5X0 104 aa4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 UNQ6190/PRO20217Q6UXQ8 127 aa4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 C15orf56Q8N910 161 aa4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 NTN5Q8WTR8 489 aaPredicted RBP4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
SMARCD1-210ENST00000551352 FAT3Q8TDW7 4589 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 GVQW2A0A096LPI5 108 aaPredicted RBP4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 LOC107984156A0A0G2JMH3 177 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 H7C2G1 150 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 RPL13AP40429 203 aaKnown RBP4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 Q1RN00 199 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 ARL17AQ8IVW1 177 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 RMI2Q96E14 147 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 SND1-IT1Q9HBX3 110 aa4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
SMARCD1-210ENST00000551352 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 PSMB2P49721 201 aa4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 XGP55808 180 aa4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 HIGD2BQ4VC39 106 aa4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 C2orf48Q96LS8 159 aa4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
SMARCD1-210ENST00000551352 IGKV2-28A0A075B6P5 120 aa4.84□□□□□ -1.63
SMARCD1-210ENST00000551352 TRBV30A0A0K0K1B3 111 aa4.84□□□□□ -1.63
SMARCD1-210ENST00000551352 F8WDY8 70 aa4.84□□□□□ -1.63
SMARCD1-210ENST00000551352 IGKV2D-28P01615 120 aa4.84□□□□□ -1.63
SMARCD1-210ENST00000551352 CAMK2N2Q96S95 79 aa4.84□□□□□ -1.63
SMARCD1-210ENST00000551352 TRBV20-1A0A075B6N2 111 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 TRAV13-2A0A0B4J235 113 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 TRIAP1O43715 76 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 TCL1BO95988 128 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 SCGB1C2P0DMR2 95 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 KRTAP10-1P60331 282 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 LRP1Q07954 4544 aaKnown RBP4.83□□□□□ -1.64
SMARCD1-210ENST00000551352 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
SMARCD1-210ENST00000551352 H3BMG7 143 aa4.82□□□□□ -1.64
SMARCD1-210ENST00000551352 NDUFC2O95298 119 aa4.82□□□□□ -1.64
SMARCD1-210ENST00000551352 Q6ZRU5 148 aa4.82□□□□□ -1.64
SMARCD1-210ENST00000551352 COX6CP09669 75 aa4.81□□□□□ -1.64
SMARCD1-210ENST00000551352 SYCNQ0VAF6 134 aa4.81□□□□□ -1.64
SMARCD1-210ENST00000551352 TTC32Q5I0X7 151 aa4.81□□□□□ -1.64
SMARCD1-210ENST00000551352 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
SMARCD1-210ENST00000551352 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
SMARCD1-210ENST00000551352 HAMPP81172 84 aa4.8□□□□□ -1.64
SMARCD1-210ENST00000551352 ATXN8Q156A1 80 aa4.8□□□□□ -1.64
SMARCD1-210ENST00000551352 Q8NDZ9 215 aa4.8□□□□□ -1.64
SMARCD1-210ENST00000551352 CARD19Q96LW7 228 aa4.8□□□□□ -1.64
SMARCD1-210ENST00000551352 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 NDUFC2-KCTD14E9PQ53 114 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 F8W1H4 67 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 PRR3P79522 188 aaKnown RBP4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 Q5VSD8 79 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 SMIM11BQ8TCY0 68 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
SMARCD1-210ENST00000551352 A0A087WTM6 91 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 EPM2AB3EWF7 344 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 LST1O00453 97 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 LECT2O14960 151 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 SLPIP03973 132 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 WFDC2Q14508 124 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 CLEC2BQ92478 149 aa4.78□□□□□ -1.64
SMARCD1-210ENST00000551352 TRBV10-2A0A0K0K1G8 114 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 NCR3O14931 201 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 PSCAO43653 123 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 SMR3BP02814 79 aaPredicted RBP4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 INAFM2P0DMQ5 153 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 SMCPP49901 116 aaPredicted RBP4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 Q6ZRP5 223 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 TMEM126AQ9H061 195 aa4.77□□□□□ -1.65
SMARCD1-210ENST00000551352 LRCOL1A6NCL2 159 aa4.76□□□□□ -1.65
SMARCD1-210ENST00000551352 C9JAW5 83 aa4.76□□□□□ -1.65
SMARCD1-210ENST00000551352 VPREB1P12018 145 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms